RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 TMEM47Q9BQJ4 181 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 WDR11Q9BZH6 1224 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 PDGFCQ9NRA1 345 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 UNC80Q8N2C7 3258 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 SALL3Q9BXA9 1300 aa14.34□□□□□ -0.11
COLCA1-202ENST00000526150 FOXP2O15409 715 aa14.33□□□□□ -0.12
COLCA1-202ENST00000526150 PDE4DQ08499 809 aa14.33□□□□□ -0.12
COLCA1-202ENST00000526150 GPATCH4Q5T3I0 446 aaKnown RBP14.33□□□□□ -0.12
COLCA1-202ENST00000526150 VPS53Q5VIR6 699 aa14.33□□□□□ -0.12
COLCA1-202ENST00000526150 RNF207Q6ZRF8 634 aa14.33□□□□□ -0.12
COLCA1-202ENST00000526150 DNERQ8NFT8 737 aa14.33□□□□□ -0.12
COLCA1-202ENST00000526150 NOC4LQ9BVI4 516 aaKnown RBP14.33□□□□□ -0.12
COLCA1-202ENST00000526150 GPCPD1Q9NPB8 672 aa14.33□□□□□ -0.12
COLCA1-202ENST00000526150 INCENPQ9NQS7 918 aa14.33□□□□□ -0.12
COLCA1-202ENST00000526150 SLC4A7Q9Y6M7 1214 aa14.33□□□□□ -0.12
COLCA1-202ENST00000526150 RBM47A0AV96 593 aaKnown RBP14.32□□□□□ -0.12
COLCA1-202ENST00000526150 TRIM6-TRIM34B2RNG4 842 aa14.32□□□□□ -0.12
COLCA1-202ENST00000526150 B4GALT4O60513 344 aa14.32□□□□□ -0.12
COLCA1-202ENST00000526150 HSPD1P10809 573 aaKnown RBP14.32□□□□□ -0.12
COLCA1-202ENST00000526150 ACTN1P12814 892 aa14.32□□□□□ -0.12
COLCA1-202ENST00000526150 SLC16A2P36021 539 aa14.32□□□□□ -0.12
COLCA1-202ENST00000526150 CCL23P55773 120 aa14.32□□□□□ -0.12
COLCA1-202ENST00000526150 RRP1P56182 461 aaKnown RBP14.32□□□□□ -0.12
COLCA1-202ENST00000526150 HDAC1Q13547 482 aaPredicted RBP14.32□□□□□ -0.12
COLCA1-202ENST00000526150 PPP2R5BQ15173 497 aa14.32□□□□□ -0.12
COLCA1-202ENST00000526150 TTBK2Q6IQ55 1244 aa14.32□□□□□ -0.12
COLCA1-202ENST00000526150 SCFD2Q8WU76 684 aa14.32□□□□□ -0.12
COLCA1-202ENST00000526150 ATXN2LQ8WWM7 1075 aaKnown RBP14.32□□□□□ -0.12
COLCA1-202ENST00000526150 ESR2Q92731 530 aa14.32□□□□□ -0.12
COLCA1-202ENST00000526150 MTG1Q9BT17 334 aaPredicted RBP14.32□□□□□ -0.12
COLCA1-202ENST00000526150 ALDH8A1Q9H2A2 487 aaPredicted RBP14.32□□□□□ -0.12
COLCA1-202ENST00000526150 TSPYL2Q9H2G4 693 aaPredicted RBP14.32□□□□□ -0.12
COLCA1-202ENST00000526150 WDR19Q8NEZ3 1342 aa14.32□□□□□ -0.12
COLCA1-202ENST00000526150 GRXCR1A8MXD5 290 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 NFIBO00712 420 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 MYL3P08590 195 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 PDHBP11177 359 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 CALML3P27482 149 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 PBX2P40425 430 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 OTOP2Q7RTS6 562 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 RGS22Q8NE09 1264 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 OR6J1Q8NGC5 347 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 TRPV6Q9H1D0 765 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 PRDM12Q9H4Q4 367 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 GRIN2DO15399 1336 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 FRMPD2Q68DX3 1309 aaPredicted RBP14.31□□□□□ -0.12
COLCA1-202ENST00000526150 CCDC171Q6TFL3 1326 aa14.31□□□□□ -0.12
COLCA1-202ENST00000526150 LRRC37A2A6NM11 1700 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 ZBBXA8MT70 800 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 RFC2P35250 354 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 PSMC6P62333 389 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 PURAQ00577 322 aaKnown RBP14.3□□□□□ -0.12
COLCA1-202ENST00000526150 PTPN11Q06124 597 aaPredicted RBP14.3□□□□□ -0.12
COLCA1-202ENST00000526150 ZNF543Q08ER8 600 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 IQCA1Q86XH1 822 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 DGKHQ86XP1 1220 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 RETREG2Q8NC44 543 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 IL27Q8NEV9 243 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 RILPL2Q969X0 211 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 FAM227BQ96M60 508 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 PCDHA11Q9Y5I1 949 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 TNKSO95271 1327 aa14.3□□□□□ -0.12
COLCA1-202ENST00000526150 A0A0D9SFI3 127 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 ZNF213O14771 459 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 IGFBP4P22692 258 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 RPS6P62753 249 aaKnown RBP14.29□□□□□ -0.12
COLCA1-202ENST00000526150 NMIQ13287 307 aaPredicted RBP14.29□□□□□ -0.12
COLCA1-202ENST00000526150 BFSP2Q13515 415 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 TTLL4Q14679 1199 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 FAM47CQ5HY64 1035 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 NFRKBQ6P4R8 1299 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 PPM1EQ8WY54 764 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 NKX2-4Q9H2Z4 354 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 RWDD1Q9H446 243 aaPredicted RBP14.29□□□□□ -0.12
COLCA1-202ENST00000526150 PRDM6Q9NQX0 595 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 CXXC1Q9P0U4 656 aaPredicted RBP14.29□□□□□ -0.12
COLCA1-202ENST00000526150 THEGQ9P2T0 379 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 NOD1Q9Y239 953 aa14.29□□□□□ -0.12
COLCA1-202ENST00000526150 HIP1O00291 1037 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 PITPNM1O00562 1244 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 SNHG28P0DPA3 235 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 TXNP10599 105 aaKnown RBP14.28□□□□□ -0.12
COLCA1-202ENST00000526150 ATP2A2P16615 1042 aaKnown RBP14.28□□□□□ -0.12
COLCA1-202ENST00000526150 EDNRBP24530 442 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 HAND2P61296 217 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 MRPS5P82675 430 aaKnown RBP14.28□□□□□ -0.12
COLCA1-202ENST00000526150 UMODL1Q5DID0 1318 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 PPP2R2DQ66LE6 453 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 SLC30A10Q6XR72 485 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 RASGRP2Q7LDG7 609 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 MCF2L2Q86YR7 1114 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 CCDC155Q8N6L0 562 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 CLEC4DQ8WXI8 215 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 PURBQ96QR8 312 aaKnown RBP14.28□□□□□ -0.12
COLCA1-202ENST00000526150 WNT8AQ9H1J5 351 aa14.28□□□□□ -0.12
COLCA1-202ENST00000526150 LCTP09848 1927 aa14.27□□□□□ -0.12
COLCA1-202ENST00000526150 ABCB11O95342 1321 aa14.27□□□□□ -0.12
COLCA1-202ENST00000526150 A6NJR5 290 aa14.27□□□□□ -0.13
COLCA1-202ENST00000526150 KIF28PB7ZC32 967 aa14.27□□□□□ -0.13
COLCA1-202ENST00000526150 NBPF20Q3BBV1 942 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms