RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 QRICH1Q2TAL8 776 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 KIAA1211Q6ZU35 1233 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 CHST3Q7LGC8 479 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 PCSK9Q8NBP7 692 aaKnown RBP14.11□□□□□ -0.15
SSBP3-210ENST00000525990 PPP1R13LQ8WUF5 828 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 VTI1AQ96AJ9 217 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 GLT1D1Q96MS3 346 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 KRT23Q9C075 422 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 DOCK5Q9H7D0 1870 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 VAT1LQ9HCJ6 419 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 TMEM39AQ9NV64 488 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 COL20A1Q9P218 1284 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 GRIN2DO15399 1336 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 DCDC2CA8MYV0 355 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 SGSM2O43147 1006 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 PSMC6P62333 389 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 NKX3-2P78367 333 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 FSCN1Q16658 493 aaKnown RBP14.1□□□□□ -0.15
SSBP3-210ENST00000525990 ASPRV1Q53RT3 343 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 UBAC1Q9BSL1 405 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 CNNM2Q9H8M5 875 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 JMJD4Q9H9V9 463 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 SPC25Q9HBM1 224 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 VTA1Q9NP79 307 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 TBX21Q9UL17 535 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 SCN10AQ9Y5Y9 1956 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 ELP1O95163 1332 aa14.1□□□□□ -0.15
SSBP3-210ENST00000525990 A0A0U1RQG5 324 aaPredicted RBP14.09□□□□□ -0.15
SSBP3-210ENST00000525990 ARVCFO00192 962 aa14.09□□□□□ -0.15
SSBP3-210ENST00000525990 DHX16O60231 1041 aaKnown RBP14.09□□□□□ -0.15
SSBP3-210ENST00000525990 PPP1R11O60927 126 aaPredicted RBP14.09□□□□□ -0.15
SSBP3-210ENST00000525990 PARP1P09874 1014 aaKnown RBP14.09□□□□□ -0.15
SSBP3-210ENST00000525990 ANTXR2P58335 489 aa14.09□□□□□ -0.15
SSBP3-210ENST00000525990 IFIT1BQ5T764 474 aaKnown RBP14.09□□□□□ -0.15
SSBP3-210ENST00000525990 IQSEC1Q6DN90 963 aa14.09□□□□□ -0.15
SSBP3-210ENST00000525990 FAM126BQ8IXS8 530 aa14.09□□□□□ -0.15
SSBP3-210ENST00000525990 COPS5Q92905 334 aa14.09□□□□□ -0.15
SSBP3-210ENST00000525990 FAM161BQ96MY7 647 aa14.09□□□□□ -0.15
SSBP3-210ENST00000525990 TOX2Q96NM4 488 aa14.09□□□□□ -0.15
SSBP3-210ENST00000525990 AP5M1Q9H0R1 490 aa14.09□□□□□ -0.15
SSBP3-210ENST00000525990 MTMR10Q9NXD2 777 aa14.09□□□□□ -0.15
SSBP3-210ENST00000525990 ADD3Q9UEY8 706 aaKnown RBP14.09□□□□□ -0.15
SSBP3-210ENST00000525990 MAD2L2Q9UI95 211 aa14.09□□□□□ -0.15
SSBP3-210ENST00000525990 UMODL1Q5DID0 1318 aa14.09□□□□□ -0.15
SSBP3-210ENST00000525990 E7EWF7 191 aa14.08□□□□□ -0.16
SSBP3-210ENST00000525990 RBAK-RBAKDNI3L0D1 243 aa14.08□□□□□ -0.16
SSBP3-210ENST00000525990 OPLAHO14841 1288 aa14.08□□□□□ -0.16
SSBP3-210ENST00000525990 EDNRBP24530 442 aa14.08□□□□□ -0.16
SSBP3-210ENST00000525990 DUSP28Q4G0W2 176 aa14.08□□□□□ -0.16
SSBP3-210ENST00000525990 CCDC178Q5BJE1 867 aa14.08□□□□□ -0.16
SSBP3-210ENST00000525990 RUFY2Q8WXA3 655 aa14.08□□□□□ -0.16
SSBP3-210ENST00000525990 TAAR1Q96RJ0 339 aa14.08□□□□□ -0.16
SSBP3-210ENST00000525990 WDR11Q9BZH6 1224 aa14.08□□□□□ -0.16
SSBP3-210ENST00000525990 PPP1R12CQ9BZL4 782 aa14.08□□□□□ -0.16
SSBP3-210ENST00000525990 GPHNQ9NQX3 736 aaPredicted RBP14.08□□□□□ -0.16
SSBP3-210ENST00000525990 LAMA2P24043 3122 aaKnown RBP14.08□□□□□ -0.16
SSBP3-210ENST00000525990 TANC1Q9C0D5 1861 aa14.08□□□□□ -0.16
SSBP3-210ENST00000525990 RBM47A0AV96 593 aaKnown RBP14.07□□□□□ -0.16
SSBP3-210ENST00000525990 ARIH2O95376 493 aa14.07□□□□□ -0.16
SSBP3-210ENST00000525990 CD4P01730 458 aa14.07□□□□□ -0.16
SSBP3-210ENST00000525990 FPGSQ05932 587 aa14.07□□□□□ -0.16
SSBP3-210ENST00000525990 PDE4DQ08499 809 aa14.07□□□□□ -0.16
SSBP3-210ENST00000525990 GPR153Q6NV75 609 aa14.07□□□□□ -0.16
SSBP3-210ENST00000525990 FBXO11Q86XK2 927 aa14.07□□□□□ -0.16
SSBP3-210ENST00000525990 SLC43A3Q8NBI5 491 aa14.07□□□□□ -0.16
SSBP3-210ENST00000525990 RBM8AQ9Y5S9 174 aaKnown RBP14.07□□□□□ -0.16
SSBP3-210ENST00000525990 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
SSBP3-210ENST00000525990 ABCB11O95342 1321 aa14.07□□□□□ -0.16
SSBP3-210ENST00000525990 COL6A3P12111 3177 aa14.07□□□□□ -0.16
SSBP3-210ENST00000525990 TRIP12Q14669 1992 aaPredicted RBP14.06□□□□□ -0.16
SSBP3-210ENST00000525990 PALM3A6NDB9 673 aaPredicted RBP14.06□□□□□ -0.16
SSBP3-210ENST00000525990 KLRF2D3W0D1 207 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 IFIT3O14879 490 aaKnown RBP14.06□□□□□ -0.16
SSBP3-210ENST00000525990 TIMP1P01033 207 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 CSF2RAP15509 400 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 CYP2C18P33260 490 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 NT5C2P49902 561 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 ITGA7Q13683 1181 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 C16orf59Q7L2K0 433 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 OR6J1Q8NGC5 347 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 SYTL5Q8TDW5 730 aaPredicted RBP14.06□□□□□ -0.16
SSBP3-210ENST00000525990 MAP4K1Q92918 833 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 RNPC3Q96LT9 517 aaKnown RBP14.06□□□□□ -0.16
SSBP3-210ENST00000525990 GUCD1Q96NT3 240 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.06□□□□□ -0.165e-7■□□□□ 10.6
SSBP3-210ENST00000525990 TRPV6Q9H1D0 765 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 MROH7Q68CQ1 1323 aa14.06□□□□□ -0.16
SSBP3-210ENST00000525990 CYTH3O43739 400 aa14.05□□□□□ -0.16
SSBP3-210ENST00000525990 B4GALT4O60513 344 aa14.05□□□□□ -0.16
SSBP3-210ENST00000525990 ACRP10323 421 aa14.05□□□□□ -0.16
SSBP3-210ENST00000525990 PURAQ00577 322 aaKnown RBP14.05□□□□□ -0.16
SSBP3-210ENST00000525990 TRDNQ13061 729 aa14.05□□□□□ -0.16
SSBP3-210ENST00000525990 GRM4Q14833 912 aa14.05□□□□□ -0.16
SSBP3-210ENST00000525990 FAM109BQ6ICB4 259 aaPredicted RBP14.05□□□□□ -0.16
SSBP3-210ENST00000525990 HOMER1Q86YM7 354 aa14.05□□□□□ -0.16
SSBP3-210ENST00000525990 MB21D2Q8IYB1 491 aaPredicted RBP14.05□□□□□ -0.16
SSBP3-210ENST00000525990 DNERQ8NFT8 737 aa14.05□□□□□ -0.16
SSBP3-210ENST00000525990 MTMR8Q96EF0 704 aa14.05□□□□□ -0.16
SSBP3-210ENST00000525990 MYL10Q9BUA6 226 aa14.05□□□□□ -0.16
SSBP3-210ENST00000525990 LSG1Q9H089 658 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms