RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 C19orf48Q6RUI8 117 aa4.58□□□□□ -1.68
CSDE1-209ENST00000525132 VN1R5Q7Z5H4 357 aa4.58□□□□□ -1.68
CSDE1-209ENST00000525132 FBXO11Q86XK2 927 aa4.58□□□□□ -1.68
CSDE1-209ENST00000525132 RAET1EQ8TD07 263 aa4.58□□□□□ -1.68
CSDE1-209ENST00000525132 DCPSQ96C86 337 aaKnown RBP4.58□□□□□ -1.68
CSDE1-209ENST00000525132 RNPC3Q96LT9 517 aaKnown RBP4.58□□□□□ -1.68
CSDE1-209ENST00000525132 NRSN2Q9GZP1 204 aa4.58□□□□□ -1.68
CSDE1-209ENST00000525132 COL12A1Q99715 3063 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 NF1P21359 2839 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 POLR2AP24928 1970 aaKnown RBP4.57□□□□□ -1.68
CSDE1-209ENST00000525132 ADAMTS20P59510 1910 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 K7ELQ4 463 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-209ENST00000525132 CPNE3O75131 537 aaKnown RBP4.57□□□□□ -1.68
CSDE1-209ENST00000525132 GHRHP01286 108 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 POLR3DP05423 398 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-209ENST00000525132 ELNP15502 786 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 EPHA1P21709 976 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 ITPKAP23677 461 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 PMLP29590 882 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 CHRNA4P43681 627 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 PRMT2P55345 433 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 FKBP1BP68106 108 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 SAFB2Q14151 953 aaKnown RBP eCLIP4.57□□□□□ -1.68
CSDE1-209ENST00000525132 SETDB1Q15047 1291 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 Q6ZS46 218 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 FBXO33Q7Z6M2 555 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 SMARCC1Q92922 1105 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-209ENST00000525132 CCDC74AQ96AQ1 378 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 NIF3L1Q9GZT8 377 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 SRA1Q9HD15 236 aaKnown RBP4.57□□□□□ -1.68
CSDE1-209ENST00000525132 ABCB6Q9NP58 842 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 CHD9Q3L8U1 2897 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 MYO9BQ13459 2157 aa4.57□□□□□ -1.68
CSDE1-209ENST00000525132 CCDC194A0A1B0GVG4 234 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 MANSC4A6NHS7 340 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-209ENST00000525132 PYCARD-AS1I3L0S3 204 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 PDE2AO00408 941 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-209ENST00000525132 SERPINB2P05120 415 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 P4HBP07237 508 aaKnown RBP4.56□□□□□ -1.68
CSDE1-209ENST00000525132 MAPK1P28482 360 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 AAMPQ13685 434 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 NBPF9Q3BBW0 867 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 CD163Q86VB7 1156 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 NCAPG2Q86XI2 1143 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 GALNT11Q8NCW6 608 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-209ENST00000525132 SETDB2Q96T68 719 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 OSMRQ99650 979 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 SSBP4Q9BWG4 385 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-209ENST00000525132 NPHS2Q9NP85 383 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 PAK6Q9NQU5 681 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-209ENST00000525132 PCNX1Q96RV3 2341 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 AFDNP55196 1824 aaKnown RBP4.56□□□□□ -1.68
CSDE1-209ENST00000525132 LTBP2Q14767 1821 aa4.56□□□□□ -1.68
CSDE1-209ENST00000525132 FBN1P35555 2871 aaKnown RBP4.55□□□□□ -1.68
CSDE1-209ENST00000525132 GRXCR1A8MXD5 290 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 FAM229AH3BQW9 127 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 RPS6KA4O75676 772 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 LMNAP02545 664 aaKnown RBP4.55□□□□□ -1.68
CSDE1-209ENST00000525132 ITGB7P26010 798 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 GRIA4P48058 902 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 PTPN12Q05209 780 aaKnown RBP4.55□□□□□ -1.68
CSDE1-209ENST00000525132 GRM2Q14416 872 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 NFIXQ14938 502 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 FOXD4L6Q3SYB3 417 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-209ENST00000525132 HERC4Q5GLZ8 1057 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-209ENST00000525132 CEP135Q66GS9 1140 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 KRT40Q6A162 431 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 FOXD4L3Q6VB84 417 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-209ENST00000525132 WFDC8Q8IUA0 241 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 MAP4K3Q8IVH8 894 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 DMRTC2Q8IXT2 367 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-209ENST00000525132 FBF1Q8TES7 1133 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 BADQ92934 168 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 WNT8BQ93098 351 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 LENG1Q96BZ8 264 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-209ENST00000525132 FMNL2Q96PY5 1086 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 RTKNQ9BST9 563 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 SGPP1Q9BX95 441 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 SRRDQ9UH36 339 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 CNOT7Q9UIV1 285 aaKnown RBP4.55□□□□□ -1.68
CSDE1-209ENST00000525132 PAXBP1Q9Y5B6 917 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 MTCH2Q9Y6C9 303 aa4.55□□□□□ -1.68
CSDE1-209ENST00000525132 POLR3AO14802 1390 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-209ENST00000525132 USP42Q9H9J4 1324 aaKnown RBP4.54□□□□□ -1.68
CSDE1-209ENST00000525132 SPDYE3A6NKU9 549 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 METTL12A8MUP2 240 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 H3BRJ5 948 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 ADAM11O75078 769 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 SMNDC1O75940 238 aaKnown RBP eCLIP4.54□□□□□ -1.68
CSDE1-209ENST00000525132 NEFLP07196 543 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 PTPRAP18433 802 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 CTGFP29279 349 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 CDC27P30260 824 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 LACTBP83111 547 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-209ENST00000525132 TCIRG1Q13488 830 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 RRP1BQ14684 758 aaKnown RBP4.54□□□□□ -1.68
CSDE1-209ENST00000525132 KIF22Q14807 665 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 COLEC12Q5KU26 742 aa4.54□□□□□ -1.68
CSDE1-209ENST00000525132 TMEM132EQ6IEE7 984 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms