RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 KRT25Q7Z3Z0 450 aa18.13■□□□□ 0.49
TSPAN4-213ENST00000524895 TNFRSF25Q93038 417 aa18.13■□□□□ 0.49
TSPAN4-213ENST00000524895 TMEM260Q9NX78 707 aa18.13■□□□□ 0.49
TSPAN4-213ENST00000524895 SPDYE3A6NKU9 549 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 M0R2N6 131 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 MEIS2O14770 477 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 ERCC3P19447 782 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 HOXA13P31271 388 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 CLK2P49760 499 aaKnown RBP18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 CRHR2Q13324 411 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 AP3B2Q13367 1082 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 Q3C1V9 767 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 FOXD4L6Q3SYB3 417 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 WDR78Q5VTH9 848 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 FOXD4L3Q6VB84 417 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 PIK3AP1Q6ZUJ8 805 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 CCAR1Q8IX12 1150 aaKnown RBP18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 SHCBP1Q8NEM2 672 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 MROH8Q9H579 483 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 CPA4Q9UI42 421 aa18.12■□□□□ 0.49
TSPAN4-213ENST00000524895 CA12O43570 354 aa18.11■□□□□ 0.49
TSPAN4-213ENST00000524895 TLR2O60603 784 aa18.11■□□□□ 0.49
TSPAN4-213ENST00000524895 HSD17B4P51659 736 aa18.11■□□□□ 0.49
TSPAN4-213ENST00000524895 GHRHRQ02643 423 aa18.11■□□□□ 0.49
TSPAN4-213ENST00000524895 NONOQ15233 471 aaKnown RBP eCLIP18.11■□□□□ 0.499e-6■■■□□ 19
TSPAN4-213ENST00000524895 RNF207Q6ZRF8 634 aa18.11■□□□□ 0.49
TSPAN4-213ENST00000524895 SAMD3Q8N6K7 520 aa18.11■□□□□ 0.49
TSPAN4-213ENST00000524895 TNPO1Q92973 898 aaKnown RBP18.11■□□□□ 0.49
TSPAN4-213ENST00000524895 MAP3K20Q9NYL2 800 aaKnown RBP18.11■□□□□ 0.49
TSPAN4-213ENST00000524895 NOL7Q9UMY1 257 aaKnown RBP18.11■□□□□ 0.49
TSPAN4-213ENST00000524895 SMCHD1A6NHR9 2005 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 PFASO15067 1338 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 FAM205CA6NFA0 338 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 FOSP01100 380 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 BCRP11274 1271 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 NOM1Q5C9Z4 860 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 EARS2Q5JPH6 523 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 MYSM1Q5VVJ2 828 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 SLC30A10Q6XR72 485 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 FCHSD1Q86WN1 690 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 ANKRD35Q8N283 1001 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 TBC1D5Q92609 795 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 PGBD1Q96JS3 809 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 ANO3Q9BYT9 981 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 MAF1Q9H063 256 aa18.1■□□□□ 0.49
TSPAN4-213ENST00000524895 RPS6P62753 249 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-213ENST00000524895 FAM173BQ6P4H8 233 aa18.09■□□□□ 0.49
TSPAN4-213ENST00000524895 PORCNQ9H237 461 aa18.09■□□□□ 0.49
TSPAN4-213ENST00000524895 EHMT1Q9H9B1 1298 aa18.09■□□□□ 0.49
TSPAN4-213ENST00000524895 A1CFQ9NQ94 594 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-213ENST00000524895 MYH15Q9Y2K3 1946 aa18.09■□□□□ 0.49
TSPAN4-213ENST00000524895 BAATQ14032 418 aaPredicted RBP18.08■□□□□ 0.48
TSPAN4-213ENST00000524895 KCTD2Q14681 263 aa18.08■□□□□ 0.48
TSPAN4-213ENST00000524895 INF2Q27J81 1249 aa18.08■□□□□ 0.48
TSPAN4-213ENST00000524895 RILPL1Q5EBL4 403 aa18.08■□□□□ 0.48
TSPAN4-213ENST00000524895 C17orf99Q6UX52 265 aa18.08■□□□□ 0.48
TSPAN4-213ENST00000524895 SYTL5Q8TDW5 730 aaPredicted RBP18.08■□□□□ 0.48
TSPAN4-213ENST00000524895 ZNF396Q96N95 335 aaPredicted RBP18.08■□□□□ 0.48
TSPAN4-213ENST00000524895 MMP19Q99542 508 aa18.08■□□□□ 0.48
TSPAN4-213ENST00000524895 EFCC1Q9HA90 598 aa18.08■□□□□ 0.48
TSPAN4-213ENST00000524895 CYP39A1Q9NYL5 469 aa18.08■□□□□ 0.48
TSPAN4-213ENST00000524895 FCER1AP12319 257 aa18.07■□□□□ 0.48
TSPAN4-213ENST00000524895 NCLP19338 710 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-213ENST00000524895 ATP2B1P20020 1258 aa18.07■□□□□ 0.48
TSPAN4-213ENST00000524895 MAPK4P31152 587 aa18.07■□□□□ 0.48
TSPAN4-213ENST00000524895 TRAPPC10P48553 1259 aa18.07■□□□□ 0.48
TSPAN4-213ENST00000524895 DNM1Q05193 864 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-213ENST00000524895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.07■□□□□ 0.485e-6■■■■■ 45.5
TSPAN4-213ENST00000524895 TBCKQ8TEA7 893 aa18.07■□□□□ 0.48
TSPAN4-213ENST00000524895 IVNS1ABPQ9Y6Y0 642 aa18.07■□□□□ 0.48
TSPAN4-213ENST00000524895 KRT85P78386 507 aa18.06■□□□□ 0.48
TSPAN4-213ENST00000524895 NEK8Q86SG6 692 aa18.06■□□□□ 0.48
TSPAN4-213ENST00000524895 R3HDMLQ9H3Y0 253 aa18.06■□□□□ 0.48
TSPAN4-213ENST00000524895 RNF186Q9NXI6 227 aa18.06■□□□□ 0.48
TSPAN4-213ENST00000524895 COL20A1Q9P218 1284 aa18.06■□□□□ 0.48
TSPAN4-213ENST00000524895 PLXNB2O15031 1838 aa18.05■□□□□ 0.48
TSPAN4-213ENST00000524895 POTEB2H3BUK9 544 aa18.05■□□□□ 0.48
TSPAN4-213ENST00000524895 TRPA1O75762 1119 aa18.05■□□□□ 0.48
TSPAN4-213ENST00000524895 SREBF1P36956 1147 aa18.05■□□□□ 0.48
TSPAN4-213ENST00000524895 TTC38Q5R3I4 469 aa18.05■□□□□ 0.48
TSPAN4-213ENST00000524895 ATL3Q6DD88 541 aa18.05■□□□□ 0.48
TSPAN4-213ENST00000524895 GPR142Q7Z601 462 aa18.05■□□□□ 0.48
TSPAN4-213ENST00000524895 PLEKHH3Q7Z736 793 aa18.05■□□□□ 0.48
TSPAN4-213ENST00000524895 CHAMP1Q96JM3 812 aa18.05■□□□□ 0.48
TSPAN4-213ENST00000524895 GBP4Q96PP9 640 aa18.05■□□□□ 0.48
TSPAN4-213ENST00000524895 CFAP45Q9UL16 551 aa18.05■□□□□ 0.48
TSPAN4-213ENST00000524895 TBC1D8O95759 1140 aa18.04■□□□□ 0.48
TSPAN4-213ENST00000524895 TOB1P50616 345 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-213ENST00000524895 ARHGAP4P98171 946 aa18.04■□□□□ 0.48
TSPAN4-213ENST00000524895 CEBPZQ03701 1054 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-213ENST00000524895 NBR1Q14596 966 aa18.04■□□□□ 0.48
TSPAN4-213ENST00000524895 LETM2Q2VYF4 491 aa18.04■□□□□ 0.48
TSPAN4-213ENST00000524895 ARHGEF16Q5VV41 709 aa18.04■□□□□ 0.48
TSPAN4-213ENST00000524895 TAAR1Q96RJ0 339 aa18.04■□□□□ 0.48
TSPAN4-213ENST00000524895 RMDN3Q96TC7 470 aa18.04■□□□□ 0.48
TSPAN4-213ENST00000524895 CFHR5Q9BXR6 569 aa18.04■□□□□ 0.48
TSPAN4-213ENST00000524895 FRMPD4Q14CM0 1322 aa18.03■□□□□ 0.48
TSPAN4-213ENST00000524895 RPTORQ8N122 1335 aa18.03■□□□□ 0.48
TSPAN4-213ENST00000524895 STRNO43815 780 aa18.03■□□□□ 0.48
TSPAN4-213ENST00000524895 CCNT1O60563 726 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms