RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MFAP1P55081 439 aaKnown RBP4.79□□□□□ -1.64
CSDE1-208ENST00000524652 CAP1Q01518 475 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 PAK2Q13177 524 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 TCEAL1Q15170 157 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 CYB5RLQ6IPT4 315 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 PAQR3Q6TCH7 311 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 SP8Q8IXZ3 490 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 FAM9AQ8IZU1 332 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-208ENST00000524652 C19orf47Q8N9M1 422 aaKnown RBP4.79□□□□□ -1.64
CSDE1-208ENST00000524652 LINC01356Q8N9X3 169 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 RGS22Q8NE09 1264 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 NLGN2Q8NFZ4 835 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 OR6P1Q8NGX9 317 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 RASGRP4Q8TDF6 673 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 CRBNQ96SW2 442 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 HAUS7Q99871 368 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 NOL6Q9H6R4 1146 aaKnown RBP4.79□□□□□ -1.64
CSDE1-208ENST00000524652 PHAXQ9H814 394 aaKnown RBP4.79□□□□□ -1.64
CSDE1-208ENST00000524652 PDLIM7Q9NR12 457 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 WHRNQ9P202 907 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 DIS3Q9Y2L1 958 aaKnown RBP4.79□□□□□ -1.64
CSDE1-208ENST00000524652 NUP160Q12769 1436 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 EEA1Q15075 1411 aa4.79□□□□□ -1.64
CSDE1-208ENST00000524652 CARMIL1Q5VZK9 1371 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 ERCC6L2Q5T890 1561 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 LTBP3Q9NS15 1303 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 BUB1BO60566 1050 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-208ENST00000524652 CD3EP07766 207 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 MSL3P1P0C860 447 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 IFNGR1P15260 489 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 PFKLP17858 780 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 IGFBP6P24592 240 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-208ENST00000524652 L1CAMP32004 1257 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 RBM10P98175 930 aaKnown RBP4.78□□□□□ -1.64
CSDE1-208ENST00000524652 ZNF200P98182 395 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-208ENST00000524652 NFIXQ14938 502 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 EEF1DP3Q658K8 133 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 RCSD1Q6JBY9 416 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 CCDC81Q6ZN84 652 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 RELTQ969Z4 430 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 PTCHD1Q96NR3 888 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 XYLT2Q9H1B5 865 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 GINM1Q9NU53 330 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 FAM86C1Q9NVL1 165 aa4.78□□□□□ -1.64
CSDE1-208ENST00000524652 A0A1W2PQJ5 194 aa4.77□□□□□ -1.65
CSDE1-208ENST00000524652 FBLN1P23142 703 aa4.77□□□□□ -1.65
CSDE1-208ENST00000524652 BUD31P41223 144 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-208ENST00000524652 GIPRP48546 466 aa4.77□□□□□ -1.65
CSDE1-208ENST00000524652 EIF6P56537 245 aaKnown RBP4.77□□□□□ -1.65
CSDE1-208ENST00000524652 TARBP2Q15633 366 aaKnown RBP4.77□□□□□ -1.65
CSDE1-208ENST00000524652 BICRALQ6AI39 1079 aa4.77□□□□□ -1.65
CSDE1-208ENST00000524652 METTL16Q86W50 562 aaKnown RBP4.77□□□□□ -1.65
CSDE1-208ENST00000524652 NLGN1Q8N2Q7 840 aa4.77□□□□□ -1.65
CSDE1-208ENST00000524652 GPRASP2Q96D09 838 aa4.77□□□□□ -1.65
CSDE1-208ENST00000524652 ZDHHC15Q96MV8 337 aa4.77□□□□□ -1.65
CSDE1-208ENST00000524652 PWWP2AQ96N64 755 aa4.77□□□□□ -1.65
CSDE1-208ENST00000524652 KLHL25Q9H0H3 589 aa4.77□□□□□ -1.65
CSDE1-208ENST00000524652 GBP3Q9H0R5 595 aa4.77□□□□□ -1.65
CSDE1-208ENST00000524652 LUC7LQ9NQ29 371 aaKnown RBP4.77□□□□□ -1.65
CSDE1-208ENST00000524652 FOXD2O60548 495 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-208ENST00000524652 GJA8P48165 433 aa4.76□□□□□ -1.65
CSDE1-208ENST00000524652 NCKAP1LP55160 1127 aa4.76□□□□□ -1.65
CSDE1-208ENST00000524652 IQGAP2Q13576 1575 aa4.76□□□□□ -1.65
CSDE1-208ENST00000524652 GNPTABQ3T906 1256 aa4.76□□□□□ -1.65
CSDE1-208ENST00000524652 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
CSDE1-208ENST00000524652 HEATR6Q6AI08 1181 aaKnown RBP4.76□□□□□ -1.65
CSDE1-208ENST00000524652 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
CSDE1-208ENST00000524652 RNF38Q9H0F5 515 aa4.76□□□□□ -1.65
CSDE1-208ENST00000524652 EFR3BQ9Y2G0 817 aa4.76□□□□□ -1.65
CSDE1-208ENST00000524652 A0A1W2PQH9 124 aa4.75□□□□□ -1.65
CSDE1-208ENST00000524652 OTOL1A6NHN0 477 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-208ENST00000524652 AURKAO14965 403 aa4.75□□□□□ -1.65
CSDE1-208ENST00000524652 PPM1BO75688 479 aa4.75□□□□□ -1.65
CSDE1-208ENST00000524652 GLI4P10075 376 aa4.75□□□□□ -1.65
CSDE1-208ENST00000524652 SYN1P17600 705 aa4.75□□□□□ -1.65
CSDE1-208ENST00000524652 SLC7A5Q01650 507 aa4.75□□□□□ -1.65
CSDE1-208ENST00000524652 GRB10Q13322 594 aa4.75□□□□□ -1.65
CSDE1-208ENST00000524652 CABP7Q86V35 215 aa4.75□□□□□ -1.65
CSDE1-208ENST00000524652 CXorf38Q8TB03 319 aa4.75□□□□□ -1.65
CSDE1-208ENST00000524652 RCC1LQ96I51 464 aaKnown RBP4.75□□□□□ -1.65
CSDE1-208ENST00000524652 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
CSDE1-208ENST00000524652 GOLGA3Q08378 1498 aa4.75□□□□□ -1.65
CSDE1-208ENST00000524652 SAMD9Q5K651 1589 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 ARHGEF11O15085 1522 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 KIAA0586Q9BVV6 1533 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 STXBP3O00186 592 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 EPHX1P07099 455 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 AMPD2Q01433 879 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 PPP2R5DQ14738 602 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 VMACQ2NL98 169 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 ADCY4Q8NFM4 1077 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 KLHL6Q8WZ60 621 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 SHDQ96IW2 340 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 MCMBPQ9BTE3 642 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 CGGBP1Q9UFW8 167 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-208ENST00000524652 DBR1Q9UK59 544 aaKnown RBP4.74□□□□□ -1.65
CSDE1-208ENST00000524652 BACE2Q9Y5Z0 518 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 HCFC2Q9Y5Z7 792 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 KIAA0556O60303 1618 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms