RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 ZEB2O60315 1214 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 TMEM127O75204 238 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 GUCA1CO95843 209 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 ZNF16P17020 682 aaPredicted RBP7.55□□□□□ -1.2
LIN7C-202ENST00000524596 HSPA9P38646 679 aaKnown RBP7.55□□□□□ -1.2
LIN7C-202ENST00000524596 DSTNP60981 165 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 ERCC6LQ2NKX8 1250 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 UBL4BQ8N7F7 174 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 FAM133AQ8N9E0 248 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 SPATA18Q8TC71 538 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 P3H4Q92791 437 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 ALKBH8Q96BT7 664 aaKnown RBP7.55□□□□□ -1.2
LIN7C-202ENST00000524596 RMDN1Q96DB5 314 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 GAL3ST1Q99999 423 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 APOL5Q9BWW9 433 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 FOXP3Q9BZS1 431 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 CARD9Q9H257 536 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 CYLDQ9NQC7 956 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 EHD2Q9NZN4 543 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 KIAA1522Q9P206 1035 aaPredicted RBP7.55□□□□□ -1.2
LIN7C-202ENST00000524596 SAP30BPQ9UHR5 308 aaKnown RBP7.55□□□□□ -1.2
LIN7C-202ENST00000524596 SH3BGRL2Q9UJC5 107 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 MOSPD1Q9UJG1 213 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 SPEF1Q9Y4P9 236 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 CCDC162PA2VCL2 907 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 GOLGA8RI6L899 631 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 YKT6O15498 198 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 CRTAPO75718 401 aaPredicted RBP7.55□□□□□ -1.2
LIN7C-202ENST00000524596 ZSCAN22P10073 491 aaPredicted RBP7.55□□□□□ -1.2
LIN7C-202ENST00000524596 PLEKHG6Q3KR16 790 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 EMC10Q5UCC4 262 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 ERICH5Q6P6B1 374 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 SESTD1Q86VW0 696 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 CCT6BQ92526 530 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 KIFAP3Q92845 792 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 ACAP3Q96P50 834 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 CARD11Q9BXL7 1154 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 NCKAP5LQ9HCH0 1330 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 NOTOA8MTQ0 251 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 EFCAB8A8MWE9 144 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 MX2P20592 715 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 HMOX2P30519 316 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 PPP4CP60510 307 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 CSNK2BP67870 215 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 PPIDQ08752 370 aaKnown RBP7.55□□□□□ -1.2
LIN7C-202ENST00000524596 SPARTQ8N0X7 666 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 PJA1Q8NG27 643 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 B3GALT6Q96L58 329 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 C8orf37Q96NL8 207 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 ALG1Q9BT22 464 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 MRPL9Q9BYD2 267 aaKnown RBP7.55□□□□□ -1.2
LIN7C-202ENST00000524596 TUFT1Q9NNX1 390 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 POLE3Q9NRF9 147 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 PARVAQ9NVD7 372 aa7.55□□□□□ -1.2
LIN7C-202ENST00000524596 GAKO14976 1311 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 NBPF26B4DH59 902 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 GNPATO15228 680 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 HSF2BPO75031 334 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 CLASP2O75122 1294 aaKnown RBP7.54□□□□□ -1.2
LIN7C-202ENST00000524596 PRKAR1BP31321 381 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 IFNA8P32881 189 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 CCT8P50990 548 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 RAP1GDS1P52306 607 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 ACAP2Q15057 778 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 RBM20Q5T481 1227 aaKnown RBP7.54□□□□□ -1.2
LIN7C-202ENST00000524596 OLFML2BQ68BL8 750 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 RNF169Q8NCN4 708 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 CNKSR1Q969H4 720 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 GINM1Q9NU53 330 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 BTBD7Q9P203 1132 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 CCDC169A6NNP5 214 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 SGK1O00141 431 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 S100A9P06702 114 aaKnown RBP7.54□□□□□ -1.2
LIN7C-202ENST00000524596 HSPA6P17066 643 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 PLCD1P51178 756 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 PPP2R3AQ06190 1150 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 LAMC2Q13753 1193 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 CLPPQ16740 277 aaPredicted RBP7.54□□□□□ -1.2
LIN7C-202ENST00000524596 PPP4R3AQ6IN85 833 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 CPLX4Q7Z7G2 160 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 RAB3IL1Q8TBN0 382 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 NSMCE1Q8WV22 266 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 ZNF75CPQ92670 426 aaPredicted RBP7.54□□□□□ -1.2
LIN7C-202ENST00000524596 RHOBTB2Q9BYZ6 727 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.54□□□□□ -1.2
LIN7C-202ENST00000524596 AIPL1Q9NZN9 384 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 SNX8Q9Y5X2 465 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 STIM1Q13586 685 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 FERMT2Q96AC1 680 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 GDAP1L1Q96MZ0 367 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.54□□□□□ -1.2
LIN7C-202ENST00000524596 FAM204AQ9H8W3 233 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 PIH1D3Q9NQM4 214 aaKnown RBP7.54□□□□□ -1.2
LIN7C-202ENST00000524596 DDX21Q9NR30 783 aaKnown RBP eCLIP7.54□□□□□ -1.2
LIN7C-202ENST00000524596 RMND1Q9NWS8 449 aa7.54□□□□□ -1.2
LIN7C-202ENST00000524596 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.54□□□□□ -1.2
LIN7C-202ENST00000524596 SPDYE3A6NKU9 549 aa7.53□□□□□ -1.2
LIN7C-202ENST00000524596 AKR1B15C9JRZ8 316 aaPredicted RBP7.53□□□□□ -1.2
LIN7C-202ENST00000524596 INO80B-WBP1J3KQ70 363 aa7.53□□□□□ -1.2
LIN7C-202ENST00000524596 NVLO15381 856 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms