RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 TEX2Q8IWB9 1127 aa17.49■□□□□ 0.39
SF3B2-202ENST00000524475 CCDC144CPQ8IYA2 1237 aa17.49■□□□□ 0.39
SF3B2-202ENST00000524475 DNERQ8NFT8 737 aa17.49■□□□□ 0.39
SF3B2-202ENST00000524475 LRRC37A2A6NM11 1700 aa17.49■□□□□ 0.39
SF3B2-202ENST00000524475 FRMPD3Q5JV73 1810 aa17.49■□□□□ 0.39
SF3B2-202ENST00000524475 PTPDC1A2A3K4 754 aa17.48■□□□□ 0.39
SF3B2-202ENST00000524475 OPLAHO14841 1288 aa17.48■□□□□ 0.39
SF3B2-202ENST00000524475 SEPT4O43236 478 aa17.48■□□□□ 0.39
SF3B2-202ENST00000524475 PDIA3P30101 505 aaKnown RBP17.48■□□□□ 0.39
SF3B2-202ENST00000524475 RBM25P49756 843 aaKnown RBP17.48■□□□□ 0.39
SF3B2-202ENST00000524475 HSD17B4P51659 736 aa17.48■□□□□ 0.39
SF3B2-202ENST00000524475 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
SF3B2-202ENST00000524475 SLC30A10Q6XR72 485 aa17.48■□□□□ 0.39
SF3B2-202ENST00000524475 RAB11FIP4Q86YS3 637 aa17.48■□□□□ 0.39
SF3B2-202ENST00000524475 TRPV1Q8NER1 839 aa17.48■□□□□ 0.39
SF3B2-202ENST00000524475 IL27Q8NEV9 243 aa17.48■□□□□ 0.39
SF3B2-202ENST00000524475 U2AF1L4Q8WU68 220 aaKnown RBP17.48■□□□□ 0.39
SF3B2-202ENST00000524475 ASTN1O14525 1302 aa17.47■□□□□ 0.39
SF3B2-202ENST00000524475 hCG_1984214I3L0E3 225 aa17.47■□□□□ 0.39
SF3B2-202ENST00000524475 SNAI1O95863 264 aaPredicted RBP17.47■□□□□ 0.39
SF3B2-202ENST00000524475 CDC27P30260 824 aa17.47■□□□□ 0.39
SF3B2-202ENST00000524475 CCND3P30281 292 aaPredicted RBP17.47■□□□□ 0.39
SF3B2-202ENST00000524475 ARMCX2Q7L311 632 aa17.47■□□□□ 0.39
SF3B2-202ENST00000524475 ZNF713Q8N859 430 aaPredicted RBP17.47■□□□□ 0.39
SF3B2-202ENST00000524475 ANKLE1Q8NAG6 615 aa17.47■□□□□ 0.39
SF3B2-202ENST00000524475 SHISA4Q96DD7 197 aa17.47■□□□□ 0.39
SF3B2-202ENST00000524475 DEFB118Q96PH6 123 aa17.47■□□□□ 0.39
SF3B2-202ENST00000524475 ABHD16BQ9H3Z7 469 aa17.47■□□□□ 0.39
SF3B2-202ENST00000524475 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.47■□□□□ 0.39
SF3B2-202ENST00000524475 RBM27Q9P2N5 1060 aaKnown RBP17.47■□□□□ 0.39
SF3B2-202ENST00000524475 OGDHLQ9ULD0 1010 aa17.47■□□□□ 0.39
SF3B2-202ENST00000524475 CNPY2Q9Y2B0 182 aa17.47■□□□□ 0.39
SF3B2-202ENST00000524475 MYCP01106 439 aaPredicted RBP17.46■□□□□ 0.39
SF3B2-202ENST00000524475 ZNF865P0CJ78 1059 aaPredicted RBP17.46■□□□□ 0.39
SF3B2-202ENST00000524475 EDNRBP24530 442 aa17.46■□□□□ 0.39
SF3B2-202ENST00000524475 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
SF3B2-202ENST00000524475 ALDH5A1P51649 535 aaPredicted RBP17.46■□□□□ 0.39
SF3B2-202ENST00000524475 LHX8Q68G74 356 aa17.46■□□□□ 0.39
SF3B2-202ENST00000524475 CMTR1Q8N1G2 835 aaKnown RBP17.46■□□□□ 0.39
SF3B2-202ENST00000524475 SYTL5Q8TDW5 730 aaPredicted RBP17.46■□□□□ 0.39
SF3B2-202ENST00000524475 MPHOSPH6Q99547 160 aaKnown RBP17.46■□□□□ 0.39
SF3B2-202ENST00000524475 C22orf23Q9BZE7 217 aa17.46■□□□□ 0.39
SF3B2-202ENST00000524475 KATNBL1Q9H079 304 aa17.46■□□□□ 0.39
SF3B2-202ENST00000524475 DDX20Q9UHI6 824 aaKnown RBP17.46■□□□□ 0.39
SF3B2-202ENST00000524475 B4DLN1 442 aa17.45■□□□□ 0.38
SF3B2-202ENST00000524475 CAPN15O75808 1086 aa17.45■□□□□ 0.38
SF3B2-202ENST00000524475 IFNAR1P17181 557 aa17.45■□□□□ 0.38
SF3B2-202ENST00000524475 EN2P19622 333 aaPredicted RBP17.45■□□□□ 0.38
SF3B2-202ENST00000524475 CALML3P27482 149 aa17.45■□□□□ 0.38
SF3B2-202ENST00000524475 MRPL12P52815 198 aaKnown RBP17.45■□□□□ 0.38
SF3B2-202ENST00000524475 NTRK3Q16288 839 aa17.45■□□□□ 0.38
SF3B2-202ENST00000524475 PPP1R18Q6NYC8 613 aa17.45■□□□□ 0.38
SF3B2-202ENST00000524475 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
SF3B2-202ENST00000524475 NAP1L2Q9ULW6 460 aaPredicted RBP17.45■□□□□ 0.38
SF3B2-202ENST00000524475 PIK3CDO00329 1044 aa17.44■□□□□ 0.38
SF3B2-202ENST00000524475 AKR1A1P14550 325 aa17.44■□□□□ 0.38
SF3B2-202ENST00000524475 ACVR2BQ13705 512 aa17.44■□□□□ 0.38
SF3B2-202ENST00000524475 UBE2Q1Q7Z7E8 422 aa17.44■□□□□ 0.38
SF3B2-202ENST00000524475 TBC1D5Q92609 795 aa17.44■□□□□ 0.38
SF3B2-202ENST00000524475 IWS1Q96ST2 819 aa17.44■□□□□ 0.38
SF3B2-202ENST00000524475 RNF26Q9BY78 433 aaPredicted RBP17.44■□□□□ 0.38
SF3B2-202ENST00000524475 VTA1Q9NP79 307 aa17.44■□□□□ 0.38
SF3B2-202ENST00000524475 GCOM1H8Y6P7 765 aaPredicted RBP17.43■□□□□ 0.38
SF3B2-202ENST00000524475 PRPF3O43395 683 aaKnown RBP17.43■□□□□ 0.38
SF3B2-202ENST00000524475 CFBP00751 764 aa17.43■□□□□ 0.38
SF3B2-202ENST00000524475 POLR2MP0CAP2 368 aa17.43■□□□□ 0.38
SF3B2-202ENST00000524475 AK2P54819 239 aa17.43■□□□□ 0.38
SF3B2-202ENST00000524475 CCDC82Q8N4S0 544 aa17.43■□□□□ 0.38
SF3B2-202ENST00000524475 NSUN6Q8TEA1 469 aaKnown RBP17.43■□□□□ 0.38
SF3B2-202ENST00000524475 KIF2CQ99661 725 aa17.43■□□□□ 0.38
SF3B2-202ENST00000524475 COL20A1Q9P218 1284 aa17.43■□□□□ 0.38
SF3B2-202ENST00000524475 FRMPD4Q14CM0 1322 aa17.43■□□□□ 0.38
SF3B2-202ENST00000524475 PFKFB2O60825 505 aa17.42■□□□□ 0.38
SF3B2-202ENST00000524475 NEK4P51957 841 aa17.42■□□□□ 0.38
SF3B2-202ENST00000524475 PFKFB3Q16875 520 aaPredicted RBP17.42■□□□□ 0.38
SF3B2-202ENST00000524475 PRAMEF19Q5SWL8 479 aa17.42■□□□□ 0.38
SF3B2-202ENST00000524475 PIBF1Q8WXW3 757 aa17.42■□□□□ 0.38
SF3B2-202ENST00000524475 PURBQ96QR8 312 aaKnown RBP17.42■□□□□ 0.38
SF3B2-202ENST00000524475 RMDN3Q96TC7 470 aa17.42■□□□□ 0.38
SF3B2-202ENST00000524475 BARHL2Q9NY43 387 aa17.42■□□□□ 0.38
SF3B2-202ENST00000524475 FAM184BQ9ULE4 1060 aa17.42■□□□□ 0.38
SF3B2-202ENST00000524475 TPCN1Q9ULQ1 816 aa17.42■□□□□ 0.38
SF3B2-202ENST00000524475 V9GY48 417 aaPredicted RBP17.42■□□□□ 0.38
SF3B2-202ENST00000524475 TNRC18O15417 2968 aaPredicted RBP17.41■□□□□ 0.38
SF3B2-202ENST00000524475 TFRCP02786 760 aaKnown RBP17.41■□□□□ 0.38
SF3B2-202ENST00000524475 RARBP10826 455 aa17.41■□□□□ 0.38
SF3B2-202ENST00000524475 SCG2P13521 617 aa17.41■□□□□ 0.38
SF3B2-202ENST00000524475 CNGA1P29973 690 aa17.41■□□□□ 0.38
SF3B2-202ENST00000524475 WWC2Q6AWC2 1192 aa17.41■□□□□ 0.38
SF3B2-202ENST00000524475 CPLX2Q6PUV4 134 aaKnown RBP17.41■□□□□ 0.38
SF3B2-202ENST00000524475 FAM177A1Q8N128 213 aaPredicted RBP17.41■□□□□ 0.38
SF3B2-202ENST00000524475 BACH2Q9BYV9 841 aa17.41■□□□□ 0.38
SF3B2-202ENST00000524475 GLT8D2Q9H1C3 349 aa17.41■□□□□ 0.38
SF3B2-202ENST00000524475 ZHX1Q9UKY1 873 aaPredicted RBP17.41■□□□□ 0.38
SF3B2-202ENST00000524475 hCG_1642624A0A1W2PR95 340 aa17.4■□□□□ 0.38
SF3B2-202ENST00000524475 RBM47A0AV96 593 aaKnown RBP17.4■□□□□ 0.38
SF3B2-202ENST00000524475 MEIS2O14770 477 aa17.4■□□□□ 0.38
SF3B2-202ENST00000524475 DUSP11O75319 330 aaKnown RBP17.4■□□□□ 0.38
SF3B2-202ENST00000524475 NKX3-2P78367 333 aa17.4■□□□□ 0.38
SF3B2-202ENST00000524475 CCT2P78371 535 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms