RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	PDXDC2P	Q6P474	469 aa		12.12	□□□□□ -0.47
SPIDR-222	ENST00000524006	SH3RF1	Q7Z6J0	888 aa		12.12	□□□□□ -0.47
SPIDR-222	ENST00000524006	CACTIN	Q8WUQ7	758 aa	Known RBP	12.12	□□□□□ -0.47
SPIDR-222	ENST00000524006	LRRC27	Q9C0I9	530 aa		12.12	□□□□□ -0.47
SPIDR-222	ENST00000524006	VPS33B	Q9H267	617 aa		12.12	□□□□□ -0.47
SPIDR-222	ENST00000524006	BLZF1	Q9H2G9	400 aa		12.12	□□□□□ -0.47
SPIDR-222	ENST00000524006	JMJD4	Q9H9V9	463 aa		12.12	□□□□□ -0.47
SPIDR-222	ENST00000524006	MAGEC2	Q9UBF1	373 aa	Predicted RBP	12.12	□□□□□ -0.47
SPIDR-222	ENST00000524006	MYH11	P35749	1972 aa		12.12	□□□□□ -0.47
SPIDR-222	ENST00000524006	UQCRHL	A0A096LP55	91 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	IQCA1L	A6NCM1	817 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	TCP10L2	B9ZVM9	353 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	USP17L10	C9JJH3	530 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	PSMA7	O14818	248 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	UQCRH	P07919	91 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	ATP1A3	P13637	1013 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	SLC16A2	P36021	539 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	ASIC1	P78348	528 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	E2F4	Q16254	413 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	ZNF658	Q5TYW1	1059 aa	Predicted RBP	12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	PPFIBP1	Q86W92	1011 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	LDHD	Q86WU2	507 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	GMCL1P1	Q8NEA9	526 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	STAM	Q92783	540 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	PSTPIP2	Q9H939	334 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	EHMT1	Q9H9B1	1298 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	TMEM260	Q9NX78	707 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	STK17A	Q9UEE5	414 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	KDM3A	Q9Y4C1	1321 aa		12.11	□□□□□ -0.47
SPIDR-222	ENST00000524006	CNTNAP1	P78357	1384 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	CLRN2	A0PK11	232 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	SPDYE2B	A6NHP3	402 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	PSMD14	O00487	310 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	ITGBL1	O95965	494 aa	Predicted RBP	12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	GH2	P01242	217 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	SPDYE6	P0CI01	402 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	PLCG1	P19174	1290 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	TXK	P42681	527 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	STX17	P56962	302 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	UBE2S	Q16763	222 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	QRICH1	Q2TAL8	776 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	HSP90AA4P	Q58FG1	418 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	SYDE2	Q5VT97	1194 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	KRT79	Q5XKE5	535 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	TTBK2	Q6IQ55	1244 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	TATDN1	Q6P1N9	297 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	FBXO11	Q86XK2	927 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	VSTM4	Q8IW00	320 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	ZFPM1	Q8IX07	1006 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	C4orf32	Q8N8J7	132 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	SPATA20	Q8TB22	786 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	NELFB	Q8WX92	580 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	JDP2	Q8WYK2	163 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	C16orf45	Q96MC5	204 aa	Predicted RBP	12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	AMN	Q9BXJ7	453 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	TMEM60	Q9H2L4	133 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	LRWD1	Q9UFC0	647 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	DDX25	Q9UHL0	483 aa	Known RBP	12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	RWDD2A	Q9UIY3	292 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	ZNRF3	Q9ULT6	936 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	SYNPO2	Q9UMS6	1093 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	PCDHA1	Q9Y5I3	950 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	PCDHAC2	Q9Y5I4	1007 aa		12.1	□□□□□ -0.47
SPIDR-222	ENST00000524006	BICDL2	A1A5D9	508 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	SPDYE3	A6NKU9	549 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	YDJC	A8MPS7	323 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	FZD9	O00144	591 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	BMP3	P12645	472 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	TEC	P42680	631 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	FMR1	Q06787	632 aa	Known RBP eCLIP	12.09	□□□□□ -0.47	1e-11	■■■■■ 41.2
SPIDR-222	ENST00000524006	AP3B2	Q13367	1082 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	CUL4B	Q13620	913 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	IL17A	Q16552	155 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	FAM114A1	Q8IWE2	563 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	AGBL3	Q8NEM8	1001 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	NOC3L	Q8WTT2	800 aa	Known RBP	12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	FAM151A	Q8WW52	585 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	MKL1	Q969V6	931 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	GMCL1	Q96IK5	515 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	PLIN2	Q99541	437 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	DNAJC18	Q9H819	358 aa		12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	ZNF70	Q9UC06	446 aa	Predicted RBP	12.09	□□□□□ -0.47
SPIDR-222	ENST00000524006	PP2D1	A8MPX8	630 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	ADAMTS3	O15072	1205 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	NDUFB10	O96000	172 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	TNNT1	P13805	278 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	BMP6	P22004	513 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	CASP1	P29466	404 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	HOXA7	P31268	230 aa	Predicted RBP	12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	FXR2	P51116	673 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	CCZ1B	P86790	482 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	CCZ1	P86791	482 aa	Predicted RBP	12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	KCNB1	Q14721	858 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	TNIP1	Q15025	636 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	PTPN14	Q15678	1187 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	SPECC1L	Q69YQ0	1117 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	CNNM4	Q6P4Q7	775 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	SV2B	Q7L1I2	683 aa		12.08	□□□□□ -0.48
SPIDR-222	ENST00000524006	CREBRF	Q8IUR6	639 aa		12.08	□□□□□ -0.48

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