RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 GRXCR2A6NFK2 248 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 IGSF3O75054 1194 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 SURF6O75683 361 aaKnown RBP11.65□□□□□ -0.54
LAMA4-220ENST00000523765 CABYRO75952 493 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 CT47B1P0C2W7 299 aaPredicted RBP11.65□□□□□ -0.54
LAMA4-220ENST00000523765 DEFB103AP81534 67 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 GPNMBQ14956 572 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 CSPP1Q1MSJ5 1256 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 SLC9C2Q5TAH2 1124 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 C12orf60Q5U649 245 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 TAPT1Q6NXT6 567 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.65□□□□□ -0.54
LAMA4-220ENST00000523765 EEPD1Q7L9B9 569 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 FAM133AQ8N9E0 248 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 SSH3Q8TE77 659 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 PURBQ96QR8 312 aaKnown RBP11.65□□□□□ -0.54
LAMA4-220ENST00000523765 GOPCQ9HD26 462 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 HOMER2Q9NSB8 354 aa11.65□□□□□ -0.54
LAMA4-220ENST00000523765 H3BQ06 376 aaPredicted RBP11.64□□□□□ -0.55
LAMA4-220ENST00000523765 ATP2A1O14983 1001 aa11.64□□□□□ -0.55
LAMA4-220ENST00000523765 DCXO43602 365 aa11.64□□□□□ -0.55
LAMA4-220ENST00000523765 ALADP13716 330 aa11.64□□□□□ -0.55
LAMA4-220ENST00000523765 RARSP54136 660 aaKnown RBP11.64□□□□□ -0.55
LAMA4-220ENST00000523765 POTEGQ6S5H5 508 aa11.64□□□□□ -0.55
LAMA4-220ENST00000523765 C16orf86Q6ZW13 317 aa11.64□□□□□ -0.55
LAMA4-220ENST00000523765 FBXO16Q8IX29 292 aaPredicted RBP11.64□□□□□ -0.55
LAMA4-220ENST00000523765 PHOSPHO2Q8TCD6 241 aa11.64□□□□□ -0.55
LAMA4-220ENST00000523765 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
LAMA4-220ENST00000523765 KIFC2Q96AC6 838 aa11.64□□□□□ -0.55
LAMA4-220ENST00000523765 CCDC136Q96JN2 1154 aa11.64□□□□□ -0.55
LAMA4-220ENST00000523765 KMT2EQ8IZD2 1858 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 SCN10AQ9Y5Y9 1956 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 USP17L12C9JPN9 530 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 USP17L21D6R901 530 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 NDUFB10O96000 172 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 PFKMP08237 780 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 IQCF3P0C7M6 154 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 TRIM27P14373 513 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 WDR5P61964 334 aaKnown RBP11.63□□□□□ -0.55
LAMA4-220ENST00000523765 STK11IPQ8N1F8 1099 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 EFCAB3Q8N7B9 438 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 FTOQ9C0B1 505 aaKnown RBP eCLIP11.63□□□□□ -0.55
LAMA4-220ENST00000523765 KANSL2Q9H9L4 492 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 SLC38A10Q9HBR0 1119 aa11.63□□□□□ -0.55
LAMA4-220ENST00000523765 A1CFQ9NQ94 594 aaKnown RBP11.63□□□□□ -0.55
LAMA4-220ENST00000523765 ZNF536O15090 1300 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 LINC01553A4QN01 128 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 F5H6K3 240 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 MBD4O95243 580 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 ATP8B2P98198 1209 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 PURAQ00577 322 aaKnown RBP11.62□□□□□ -0.55
LAMA4-220ENST00000523765 ZP2Q05996 745 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 KLRC3Q07444 240 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 PRPF38AQ8NAV1 312 aaKnown RBP11.62□□□□□ -0.55
LAMA4-220ENST00000523765 NEK9Q8TD19 979 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 CCDC17Q96LX7 622 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 AP5M1Q9H0R1 490 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 LMCD1Q9NZU5 365 aa11.62□□□□□ -0.55
LAMA4-220ENST00000523765 WDR87Q6ZQQ6 2873 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 KIF28PB7ZC32 967 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 ZBED4O75132 1171 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 MYL3P08590 195 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 ACTN1P12814 892 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 IRS1P35568 1242 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 SNAP25P60880 206 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 ERVK-21P61565 698 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 NBPF20Q3BBV1 942 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 FAM47CQ5HY64 1035 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 B4GALNT3Q6L9W6 998 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 CHMP4CQ96CF2 233 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 CTAGE1Q96RT6 745 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 C17orf80Q9BSJ5 609 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 KCNH6Q9H252 994 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 TSHZ2Q9NRE2 1034 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 FAM86C1Q9NVL1 165 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 NOP58Q9Y2X3 529 aaKnown RBP11.61□□□□□ -0.55
LAMA4-220ENST00000523765 CACNA1AO00555 2505 aa11.61□□□□□ -0.55
LAMA4-220ENST00000523765 MYH7P12883 1935 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 TECTAO75443 2155 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 PLXNA3P51805 1871 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 GOLIM4O00461 696 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 RASA1P20936 1047 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 MUM1L1Q5H9M0 696 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 FAM117BQ6P1L5 589 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 CTR9Q6PD62 1173 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 AACSQ86V21 672 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 TMEM57Q8N5G2 664 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 CHST13Q8NET6 341 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 ARHGAP45Q92619 1136 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 DNAJC2Q99543 621 aaKnown RBP11.6□□□□□ -0.55
LAMA4-220ENST00000523765 ALG13Q9NP73 1137 aaKnown RBP11.6□□□□□ -0.55
LAMA4-220ENST00000523765 MUTYHQ9UIF7 546 aa11.6□□□□□ -0.55
LAMA4-220ENST00000523765 NLRC5Q86WI3 1866 aa11.59□□□□□ -0.55
LAMA4-220ENST00000523765 SPTBN4Q9H254 2564 aa11.59□□□□□ -0.55
LAMA4-220ENST00000523765 ZEB2O60315 1214 aa11.59□□□□□ -0.55
LAMA4-220ENST00000523765 SUPT20HL2P0C7V6 817 aa11.59□□□□□ -0.55
LAMA4-220ENST00000523765 RFC2P35250 354 aa11.59□□□□□ -0.55
LAMA4-220ENST00000523765 TCF15Q12870 199 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms