RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 Q9Y3F1 56 aa30.64■■■□□ 2.5
PVT1-219ENST00000523427 PTPDC1A2A3K4 754 aa30.63■■■□□ 2.49
PVT1-219ENST00000523427 ICAM1P05362 532 aa30.63■■■□□ 2.49
PVT1-219ENST00000523427 PPP2R2DQ66LE6 453 aa30.63■■■□□ 2.49
PVT1-219ENST00000523427 IL27Q8NEV9 243 aa30.63■■■□□ 2.49
PVT1-219ENST00000523427 ADAMTS19Q8TE59 1207 aa30.63■■■□□ 2.49
PVT1-219ENST00000523427 WDR11Q9BZH6 1224 aa30.63■■■□□ 2.49
PVT1-219ENST00000523427 ALDH8A1Q9H2A2 487 aaPredicted RBP30.63■■■□□ 2.49
PVT1-219ENST00000523427 FRMPD2Q68DX3 1309 aaPredicted RBP30.63■■■□□ 2.49
PVT1-219ENST00000523427 NFIBO00712 420 aa30.62■■■□□ 2.49
PVT1-219ENST00000523427 MRPS5P82675 430 aaKnown RBP30.62■■■□□ 2.49
PVT1-219ENST00000523427 DEFB128Q7Z7B8 93 aa30.62■■■□□ 2.49
PVT1-219ENST00000523427 ADD3Q9UEY8 706 aaKnown RBP30.62■■■□□ 2.49
PVT1-219ENST00000523427 PCDHB15Q9Y5E8 787 aa30.62■■■□□ 2.49
PVT1-219ENST00000523427 MX1P20591 662 aa30.61■■■□□ 2.49
PVT1-219ENST00000523427 COL9A1P20849 921 aa30.61■■■□□ 2.49
PVT1-219ENST00000523427 ALDH5A1P51649 535 aaPredicted RBP30.61■■■□□ 2.49
PVT1-219ENST00000523427 DUSP28Q4G0W2 176 aa30.61■■■□□ 2.49
PVT1-219ENST00000523427 FAM47CQ5HY64 1035 aa30.61■■■□□ 2.49
PVT1-219ENST00000523427 SYDE2Q5VT97 1194 aa30.61■■■□□ 2.49
PVT1-219ENST00000523427 DCAF4Q8WV16 495 aa30.61■■■□□ 2.49
PVT1-219ENST00000523427 SEZ6LQ9BYH1 1024 aa30.61■■■□□ 2.49
PVT1-219ENST00000523427 LRRC37A2A6NM11 1700 aa30.6■■■□□ 2.49
PVT1-219ENST00000523427 CALML3P27482 149 aa30.6■■■□□ 2.49
PVT1-219ENST00000523427 OR6J1Q8NGC5 347 aa30.6■■■□□ 2.49
PVT1-219ENST00000523427 RANBP17Q9H2T7 1088 aaKnown RBP30.6■■■□□ 2.49
PVT1-219ENST00000523427 GPHNQ9NQX3 736 aaPredicted RBP30.6■■■□□ 2.49
PVT1-219ENST00000523427 TNKSO95271 1327 aa30.59■■■□□ 2.49
PVT1-219ENST00000523427 ATP2A2P16615 1042 aaKnown RBP30.59■■■□□ 2.49
PVT1-219ENST00000523427 TTLL4Q14679 1199 aa30.59■■■□□ 2.49
PVT1-219ENST00000523427 MORC4Q8TE76 937 aa30.59■■■□□ 2.49
PVT1-219ENST00000523427 POLR3EQ9NVU0 708 aa30.59■■■□□ 2.49
PVT1-219ENST00000523427 GBF1Q92538 1859 aa30.59■■■□□ 2.49
PVT1-219ENST00000523427 CHMP4BP1P59074 171 aa30.58■■■□□ 2.49
PVT1-219ENST00000523427 VWCEQ96DN2 955 aa30.58■■■□□ 2.49
PVT1-219ENST00000523427 UHRF1Q96T88 793 aaPredicted RBP30.58■■■□□ 2.49
PVT1-219ENST00000523427 CERS4Q9HA82 394 aa30.58■■■□□ 2.49
PVT1-219ENST00000523427 SUPT20HL2P0C7V6 817 aa30.57■■■□□ 2.48
PVT1-219ENST00000523427 PURAQ00577 322 aaKnown RBP30.57■■■□□ 2.48
PVT1-219ENST00000523427 SLC30A10Q6XR72 485 aa30.57■■■□□ 2.48
PVT1-219ENST00000523427 TMEM47Q9BQJ4 181 aa30.57■■■□□ 2.48
PVT1-219ENST00000523427 RAPGEFL1Q9UHV5 662 aa30.57■■■□□ 2.48
PVT1-219ENST00000523427 PCDHA11Q9Y5I1 949 aa30.57■■■□□ 2.48
PVT1-219ENST00000523427 RFXAPO00287 272 aa30.56■■■□□ 2.48
PVT1-219ENST00000523427 CPT1AP50416 773 aa30.56■■■□□ 2.48
PVT1-219ENST00000523427 SKIV2LQ15477 1246 aaKnown RBP30.56■■■□□ 2.48
PVT1-219ENST00000523427 MTG1Q9BT17 334 aaPredicted RBP30.56■■■□□ 2.48
PVT1-219ENST00000523427 TSPYL2Q9H2G4 693 aaPredicted RBP30.56■■■□□ 2.48
PVT1-219ENST00000523427 ZBTB47Q9UFB7 747 aaPredicted RBP30.56■■■□□ 2.48
PVT1-219ENST00000523427 ANAPC4Q9UJX5 808 aa30.56■■■□□ 2.48
PVT1-219ENST00000523427 ORC4O43929 436 aa30.55■■■□□ 2.48
PVT1-219ENST00000523427 TOP1P11387 765 aaKnown RBP30.55■■■□□ 2.48
PVT1-219ENST00000523427 PDE4DQ08499 809 aa30.55■■■□□ 2.48
PVT1-219ENST00000523427 RNF207Q6ZRF8 634 aa30.55■■■□□ 2.48
PVT1-219ENST00000523427 LCTP09848 1927 aa30.54■■■□□ 2.48
PVT1-219ENST00000523427 NBPF20Q3BBV1 942 aa30.54■■■□□ 2.48
PVT1-219ENST00000523427 BTNL9Q6UXG8 535 aa30.54■■■□□ 2.48
PVT1-219ENST00000523427 COPS5Q92905 334 aa30.54■■■□□ 2.48
PVT1-219ENST00000523427 CHD7Q9P2D1 2997 aa30.53■■■□□ 2.48
PVT1-219ENST00000523427 BRDTQ58F21 947 aaPredicted RBP30.53■■■□□ 2.48
PVT1-219ENST00000523427 TMEM67Q5HYA8 995 aa30.53■■■□□ 2.48
PVT1-219ENST00000523427 ANKRD45Q5TZF3 282 aa30.53■■■□□ 2.48
PVT1-219ENST00000523427 CLEC4DQ8WXI8 215 aa30.53■■■□□ 2.48
PVT1-219ENST00000523427 NECAB3Q96P71 396 aaPredicted RBP30.53■■■□□ 2.48
PVT1-219ENST00000523427 CA3P07451 260 aa30.52■■■□□ 2.48
PVT1-219ENST00000523427 NOVP48745 357 aa30.52■■■□□ 2.48
PVT1-219ENST00000523427 HAND2P61296 217 aa30.52■■■□□ 2.48
PVT1-219ENST00000523427 TFF2Q03403 129 aa30.52■■■□□ 2.48
PVT1-219ENST00000523427 PPP2R5BQ15173 497 aa30.52■■■□□ 2.48
PVT1-219ENST00000523427 FTOQ9C0B1 505 aaKnown RBP eCLIP30.52■■■□□ 2.48
PVT1-219ENST00000523427 FGAP02671 866 aa30.51■■■□□ 2.47
PVT1-219ENST00000523427 RPS6P62753 249 aaKnown RBP30.51■■■□□ 2.47
PVT1-219ENST00000523427 RETREG2Q8NC44 543 aa30.51■■■□□ 2.47
PVT1-219ENST00000523427 EVI5LQ96CN4 794 aa30.51■■■□□ 2.47
PVT1-219ENST00000523427 FAM227BQ96M60 508 aa30.51■■■□□ 2.47
PVT1-219ENST00000523427 MUC3AQ02505 3323 aa30.51■■■□□ 2.47
PVT1-219ENST00000523427 NCOR1O75376 2440 aa30.51■■■□□ 2.47
PVT1-219ENST00000523427 RBM47A0AV96 593 aaKnown RBP30.5■■■□□ 2.47
PVT1-219ENST00000523427 PFKMP08237 780 aa30.5■■■□□ 2.47
PVT1-219ENST00000523427 ACTN1P12814 892 aa30.5■■■□□ 2.47
PVT1-219ENST00000523427 HELLSQ9NRZ9 838 aa30.5■■■□□ 2.47
PVT1-219ENST00000523427 NOD1Q9Y239 953 aa30.5■■■□□ 2.47
PVT1-219ENST00000523427 FGRP09769 529 aa30.49■■■□□ 2.47
PVT1-219ENST00000523427 PDHBP11177 359 aa30.49■■■□□ 2.47
PVT1-219ENST00000523427 ALX1Q15699 326 aa30.49■■■□□ 2.47
PVT1-219ENST00000523427 USH1GQ495M9 461 aa30.49■■■□□ 2.47
PVT1-219ENST00000523427 MPHOSPH6Q99547 160 aaKnown RBP30.49■■■□□ 2.47
PVT1-219ENST00000523427 RAD50Q92878 1312 aa30.48■■■□□ 2.47
PVT1-219ENST00000523427 SCN5AQ14524 2016 aa30.48■■■□□ 2.47
PVT1-219ENST00000523427 A0A0D9SFI3 127 aa30.48■■■□□ 2.47
PVT1-219ENST00000523427 TXNP10599 105 aaKnown RBP30.48■■■□□ 2.47
PVT1-219ENST00000523427 SCFD2Q8WU76 684 aa30.48■■■□□ 2.47
PVT1-219ENST00000523427 TCF20Q9UGU0 1960 aaKnown RBP30.47■■■□□ 2.47
PVT1-219ENST00000523427 LOC102724159A0A0B4J2E5 919 aa30.47■■■□□ 2.47
PVT1-219ENST00000523427 GTPBP6O43824 516 aaPredicted RBP30.47■■■□□ 2.47
PVT1-219ENST00000523427 PWP2Q15269 919 aaKnown RBP30.47■■■□□ 2.47
PVT1-219ENST00000523427 KRT40Q6A162 431 aa30.47■■■□□ 2.47
PVT1-219ENST00000523427 ARNTL2Q8WYA1 636 aa30.47■■■□□ 2.47
PVT1-219ENST00000523427 SALL3Q9BXA9 1300 aa30.47■■■□□ 2.47
PVT1-219ENST00000523427 IQCF3P0C7M6 154 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms