RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 ACSS3Q9H6R3 686 aa7.97□□□□□ -1.13
LINC00534-203ENST00000523406 DCTPP1Q9H773 170 aa7.97□□□□□ -1.13
LINC00534-203ENST00000523406 DDX21Q9NR30 783 aaKnown RBP eCLIP7.97□□□□□ -1.13
LINC00534-203ENST00000523406 PPP1R1BQ9UD71 204 aaPredicted RBP7.97□□□□□ -1.13
LINC00534-203ENST00000523406 NHSL1Q5SYE7 1610 aa7.96□□□□□ -1.13
LINC00534-203ENST00000523406 KDM6AO15550 1401 aaPredicted RBP7.96□□□□□ -1.13
LINC00534-203ENST00000523406 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.96□□□□□ -1.14
LINC00534-203ENST00000523406 PRAMEF22A3QJZ6 481 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 MEIS3P2A8K0S8 358 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 C1QTNF9BB2RNN3 333 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 SART1O43290 800 aaKnown RBP7.96□□□□□ -1.14
LINC00534-203ENST00000523406 HCLS1P14317 486 aaPredicted RBP7.96□□□□□ -1.14
LINC00534-203ENST00000523406 GTF2F1P35269 517 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00534-203ENST00000523406 EIF6P56537 245 aaKnown RBP7.96□□□□□ -1.14
LINC00534-203ENST00000523406 ETF1P62495 437 aaKnown RBP7.96□□□□□ -1.14
LINC00534-203ENST00000523406 RBL2Q08999 1139 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 KCNMA1Q12791 1236 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 AIMP1Q12904 312 aaKnown RBP7.96□□□□□ -1.14
LINC00534-203ENST00000523406 KSR2Q6VAB6 950 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 ARMC10Q8N2F6 343 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 CPLX3Q8WVH0 158 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 ISL2Q96A47 359 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 ACSF2Q96CM8 615 aaPredicted RBP7.96□□□□□ -1.14
LINC00534-203ENST00000523406 ZNF496Q96IT1 587 aaPredicted RBP7.96□□□□□ -1.14
LINC00534-203ENST00000523406 SSBP4Q9BWG4 385 aaPredicted RBP7.96□□□□□ -1.14
LINC00534-203ENST00000523406 ZNF408Q9H9D4 720 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 PICK1Q9NRD5 415 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 TJP2Q9UDY2 1190 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 HEG1Q9ULI3 1381 aa7.96□□□□□ -1.14
LINC00534-203ENST00000523406 CRYBG1Q9Y4K1 1723 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 EXOC5O00471 708 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 DNAJA2O60884 412 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 ALDH1L1O75891 902 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 MYL6BP14649 208 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 ETFBP38117 255 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 ATP8B2P98198 1209 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 NEXNQ0ZGT2 675 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 PROSER3Q2NL68 480 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 LRRFIP1Q32MZ4 808 aaKnown RBP7.95□□□□□ -1.14
LINC00534-203ENST00000523406 CDPF1Q6NVV7 123 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 UBE3DQ7Z6J8 389 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 LSRQ86X29 649 aaPredicted RBP7.95□□□□□ -1.14
LINC00534-203ENST00000523406 HID1Q8IV36 788 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 OR6P1Q8NGX9 317 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 USP44Q9H0E7 712 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 ANTXR1Q9H6X2 564 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 FBRSQ9HAH7 460 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 PIDD1Q9HB75 910 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 TMOD3Q9NYL9 352 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 C9orf78Q9NZ63 289 aaPredicted RBP7.95□□□□□ -1.14
LINC00534-203ENST00000523406 MAP3K2Q9Y2U5 619 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 LRRFIP2Q9Y608 721 aaKnown RBP7.95□□□□□ -1.14
LINC00534-203ENST00000523406 MRVI1Q9Y6F6 885 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 ROBO1Q9Y6N7 1651 aa7.95□□□□□ -1.14
LINC00534-203ENST00000523406 PXDNLA1KZ92 1463 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 CACNA1FO60840 1977 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 AHDC1Q5TGY3 1603 aaPredicted RBP7.94□□□□□ -1.14
LINC00534-203ENST00000523406 LTBP4Q8N2S1 1624 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 SLC22A31A6NKX4 558 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 GAS2O43903 313 aaKnown RBP7.94□□□□□ -1.14
LINC00534-203ENST00000523406 CAP2P40123 477 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 SLBPQ14493 270 aaKnown RBP eCLIP7.94□□□□□ -1.14
LINC00534-203ENST00000523406 BEND3Q5T5X7 828 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 FBXW10Q5XX13 1052 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 MCATQ8IVS2 390 aaKnown RBP7.94□□□□□ -1.14
LINC00534-203ENST00000523406 MRPL41Q8IXM3 137 aaKnown RBP7.94□□□□□ -1.14
LINC00534-203ENST00000523406 SMYD4Q8IYR2 804 aaPredicted RBP7.94□□□□□ -1.14
LINC00534-203ENST00000523406 KCT2Q8NC54 265 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 XAGE3Q8WTP9 111 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 TMEM40Q8WWA1 233 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 EZH1Q92800 747 aaPredicted RBP7.94□□□□□ -1.14
LINC00534-203ENST00000523406 ANAPC16Q96DE5 110 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 MYRFLQ96LU7 910 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 GMIPQ9P107 970 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 KDM3BQ7LBC6 1761 aa7.94□□□□□ -1.14
LINC00534-203ENST00000523406 EIF5BO60841 1220 aaKnown RBP7.93□□□□□ -1.14
LINC00534-203ENST00000523406 RNGTTO60942 597 aaKnown RBP7.93□□□□□ -1.14
LINC00534-203ENST00000523406 STK10O94804 968 aaKnown RBP7.93□□□□□ -1.14
LINC00534-203ENST00000523406 USP11P51784 963 aa7.93□□□□□ -1.14
LINC00534-203ENST00000523406 RASSF7Q02833 373 aa7.93□□□□□ -1.14
LINC00534-203ENST00000523406 NKG7Q16617 165 aa7.93□□□□□ -1.14
LINC00534-203ENST00000523406 SGO2Q562F6 1265 aa7.93□□□□□ -1.14
LINC00534-203ENST00000523406 COPS6Q7L5N1 327 aa7.93□□□□□ -1.14
LINC00534-203ENST00000523406 FAM169BQ8N8A8 192 aa7.93□□□□□ -1.14
LINC00534-203ENST00000523406 LINS1Q8NG48 757 aa7.93□□□□□ -1.14
LINC00534-203ENST00000523406 TMEM87BQ96K49 555 aa7.93□□□□□ -1.14
LINC00534-203ENST00000523406 USP16Q9Y5T5 823 aa7.93□□□□□ -1.14
LINC00534-203ENST00000523406 ATP10DQ9P241 1426 aa7.93□□□□□ -1.14
LINC00534-203ENST00000523406 PARP4Q9UKK3 1724 aaKnown RBP7.92□□□□□ -1.14
LINC00534-203ENST00000523406 CHURC1-FNTBB4DL54 471 aa7.92□□□□□ -1.14
LINC00534-203ENST00000523406 SMARCA5O60264 1052 aaPredicted RBP7.92□□□□□ -1.14
LINC00534-203ENST00000523406 BMP3P12645 472 aa7.92□□□□□ -1.14
LINC00534-203ENST00000523406 RAB6AP20340 208 aa7.92□□□□□ -1.14
LINC00534-203ENST00000523406 HSP90AB4PQ58FF6 505 aa7.92□□□□□ -1.14
LINC00534-203ENST00000523406 BMP2KLQ5H9B9 411 aa7.92□□□□□ -1.14
LINC00534-203ENST00000523406 CDCP2Q5VXM1 449 aa7.92□□□□□ -1.14
LINC00534-203ENST00000523406 SLC6A19Q695T7 634 aa7.92□□□□□ -1.14
LINC00534-203ENST00000523406 OVOS1Q6IE37 1185 aa7.92□□□□□ -1.14
LINC00534-203ENST00000523406 CDC37L1Q7L3B6 337 aa7.92□□□□□ -1.14
LINC00534-203ENST00000523406 FAM20CQ8IXL6 584 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms