RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 PCDHA11Q9Y5I1 949 aa26.92■■□□□ 1.9
PVT1-218ENST00000523328 TCF20Q9UGU0 1960 aaKnown RBP26.91■■□□□ 1.9
PVT1-218ENST00000523328 SCN10AQ9Y5Y9 1956 aa26.91■■□□□ 1.9
PVT1-218ENST00000523328 ERC2O15083 957 aa26.91■■□□□ 1.9
PVT1-218ENST00000523328 PPP2R2DQ66LE6 453 aa26.91■■□□□ 1.9
PVT1-218ENST00000523328 DIEXFQ68CQ4 756 aaKnown RBP26.91■■□□□ 1.9
PVT1-218ENST00000523328 OTUD7AQ8TE49 926 aaPredicted RBP26.91■■□□□ 1.9
PVT1-218ENST00000523328 RANBP17Q9H2T7 1088 aaKnown RBP26.91■■□□□ 1.9
PVT1-218ENST00000523328 BDP1A6H8Y1 2624 aa26.91■■□□□ 1.9
PVT1-218ENST00000523328 UHRF1Q96T88 793 aaPredicted RBP26.9■■□□□ 1.9
PVT1-218ENST00000523328 TRMT13Q9NUP7 481 aaKnown RBP26.9■■□□□ 1.9
PVT1-218ENST00000523328 PRRC2BQ5JSZ5 2229 aaKnown RBP26.89■■□□□ 1.9
PVT1-218ENST00000523328 TRANK1O15050 2925 aa26.89■■□□□ 1.9
PVT1-218ENST00000523328 XIRP2A4UGR9 3374 aa26.89■■□□□ 1.9
PVT1-218ENST00000523328 ALDH5A1P51649 535 aaPredicted RBP26.89■■□□□ 1.9
PVT1-218ENST00000523328 PURAQ00577 322 aaKnown RBP26.89■■□□□ 1.9
PVT1-218ENST00000523328 BAATQ14032 418 aaPredicted RBP26.89■■□□□ 1.9
PVT1-218ENST00000523328 MTMR7Q9Y216 660 aa26.89■■□□□ 1.9
PVT1-218ENST00000523328 ZBBXA8MT70 800 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 NFIBO00712 420 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 CYP2C9P11712 490 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 ATP2A2P16615 1042 aaKnown RBP26.88■■□□□ 1.89
PVT1-218ENST00000523328 TTLL4Q14679 1199 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 CCDC96Q2M329 555 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 TTBK2Q6IQ55 1244 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 BTNL9Q6UXG8 535 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 DCAF4Q8WV16 495 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 WDR11Q9BZH6 1224 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 POLR3EQ9NVU0 708 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 ADD3Q9UEY8 706 aaKnown RBP26.88■■□□□ 1.89
PVT1-218ENST00000523328 ANAPC4Q9UJX5 808 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 TNKSO95271 1327 aa26.88■■□□□ 1.89
PVT1-218ENST00000523328 LOC102724159A0A0B4J2E5 919 aa26.87■■□□□ 1.89
PVT1-218ENST00000523328 RBM47A0AV96 593 aaKnown RBP26.87■■□□□ 1.89
PVT1-218ENST00000523328 RANBP6O60518 1105 aaKnown RBP26.87■■□□□ 1.89
PVT1-218ENST00000523328 PFKMP08237 780 aa26.87■■□□□ 1.89
PVT1-218ENST00000523328 SUPT20HL2P0C7V6 817 aa26.87■■□□□ 1.89
PVT1-218ENST00000523328 SLC16A2P36021 539 aa26.87■■□□□ 1.89
PVT1-218ENST00000523328 PWP2Q15269 919 aaKnown RBP26.87■■□□□ 1.89
PVT1-218ENST00000523328 RAPGEFL1Q9UHV5 662 aa26.87■■□□□ 1.89
PVT1-218ENST00000523328 TANC1Q9C0D5 1861 aa26.86■■□□□ 1.89
PVT1-218ENST00000523328 ORC4O43929 436 aa26.85■■□□□ 1.89
PVT1-218ENST00000523328 FGRP09769 529 aa26.85■■□□□ 1.89
PVT1-218ENST00000523328 CPT1AP50416 773 aa26.85■■□□□ 1.89
PVT1-218ENST00000523328 VPS53Q5VIR6 699 aa26.85■■□□□ 1.89
PVT1-218ENST00000523328 DEFB128Q7Z7B8 93 aa26.85■■□□□ 1.89
PVT1-218ENST00000523328 TET1Q8NFU7 2136 aa26.84■■□□□ 1.89
PVT1-218ENST00000523328 MYL3P08590 195 aa26.84■■□□□ 1.89
PVT1-218ENST00000523328 BMP1P13497 986 aa26.84■■□□□ 1.89
PVT1-218ENST00000523328 SYDE2Q5VT97 1194 aa26.84■■□□□ 1.89
PVT1-218ENST00000523328 MICALL1Q8N3F8 863 aa26.84■■□□□ 1.89
PVT1-218ENST00000523328 IL27Q8NEV9 243 aa26.84■■□□□ 1.89
PVT1-218ENST00000523328 TSPYL2Q9H2G4 693 aaPredicted RBP26.84■■□□□ 1.89
PVT1-218ENST00000523328 PTPDC1A2A3K4 754 aa26.83■■□□□ 1.89
PVT1-218ENST00000523328 MX1P20591 662 aa26.83■■□□□ 1.89
PVT1-218ENST00000523328 TFF2Q03403 129 aa26.83■■□□□ 1.89
PVT1-218ENST00000523328 TMEM67Q5HYA8 995 aa26.83■■□□□ 1.89
PVT1-218ENST00000523328 SLC30A10Q6XR72 485 aa26.83■■□□□ 1.89
PVT1-218ENST00000523328 OR6J1Q8NGC5 347 aa26.83■■□□□ 1.89
PVT1-218ENST00000523328 CLEC4DQ8WXI8 215 aa26.83■■□□□ 1.89
PVT1-218ENST00000523328 MTG1Q9BT17 334 aaPredicted RBP26.83■■□□□ 1.89
PVT1-218ENST00000523328 CA3P07451 260 aa26.82■■□□□ 1.88
PVT1-218ENST00000523328 POU3F3P20264 500 aaPredicted RBP26.82■■□□□ 1.88
PVT1-218ENST00000523328 NBPF20Q3BBV1 942 aa26.82■■□□□ 1.88
PVT1-218ENST00000523328 NECAB3Q96P71 396 aaPredicted RBP26.82■■□□□ 1.88
PVT1-218ENST00000523328 TMEM47Q9BQJ4 181 aa26.82■■□□□ 1.88
PVT1-218ENST00000523328 PCDHB15Q9Y5E8 787 aa26.82■■□□□ 1.88
PVT1-218ENST00000523328 SALL3Q9BXA9 1300 aa26.82■■□□□ 1.88
PVT1-218ENST00000523328 TRIP12Q14669 1992 aaPredicted RBP26.82■■□□□ 1.88
PVT1-218ENST00000523328 RFXAPO00287 272 aa26.81■■□□□ 1.88
PVT1-218ENST00000523328 TOP1P11387 765 aaKnown RBP26.81■■□□□ 1.88
PVT1-218ENST00000523328 ALX1Q15699 326 aa26.81■■□□□ 1.88
PVT1-218ENST00000523328 GPHNQ9NQX3 736 aaPredicted RBP26.81■■□□□ 1.88
PVT1-218ENST00000523328 MTCH2Q9Y6C9 303 aa26.81■■□□□ 1.88
PVT1-218ENST00000523328 FRMPD2Q68DX3 1309 aaPredicted RBP26.81■■□□□ 1.88
PVT1-218ENST00000523328 EDNRBP24530 442 aa26.8■■□□□ 1.88
PVT1-218ENST00000523328 CALML3P27482 149 aa26.8■■□□□ 1.88
PVT1-218ENST00000523328 NFRKBQ6P4R8 1299 aa26.8■■□□□ 1.88
PVT1-218ENST00000523328 PPP1R13LQ8WUF5 828 aa26.8■■□□□ 1.88
PVT1-218ENST00000523328 SLC9A7Q96T83 725 aa26.8■■□□□ 1.88
PVT1-218ENST00000523328 GPCPD1Q9NPB8 672 aa26.8■■□□□ 1.88
PVT1-218ENST00000523328 PTPRSQ13332 1948 aa26.8■■□□□ 1.88
PVT1-218ENST00000523328 EPOPA6NHQ4 379 aa26.79■■□□□ 1.88
PVT1-218ENST00000523328 A6NJR5 290 aa26.79■■□□□ 1.88
PVT1-218ENST00000523328 PITPNM1O00562 1244 aa26.79■■□□□ 1.88
PVT1-218ENST00000523328 NKRFO15226 690 aaKnown RBP eCLIP26.79■■□□□ 1.888e-7■■□□□ 12.5
PVT1-218ENST00000523328 IQCF3P0C7M6 154 aa26.79■■□□□ 1.88
PVT1-218ENST00000523328 ACTN1P12814 892 aa26.79■■□□□ 1.88
PVT1-218ENST00000523328 RFC2P35250 354 aa26.79■■□□□ 1.88
PVT1-218ENST00000523328 PPP2R5BQ15173 497 aa26.79■■□□□ 1.88
PVT1-218ENST00000523328 FAM47CQ5HY64 1035 aa26.79■■□□□ 1.88
PVT1-218ENST00000523328 RNF207Q6ZRF8 634 aa26.79■■□□□ 1.88
PVT1-218ENST00000523328 TCP11L1Q9NUJ3 509 aa26.79■■□□□ 1.88
PVT1-218ENST00000523328 ARHGEF15O94989 841 aa26.78■■□□□ 1.88
PVT1-218ENST00000523328 PDHBP11177 359 aa26.78■■□□□ 1.88
PVT1-218ENST00000523328 KCNQ1P51787 676 aa26.78■■□□□ 1.88
PVT1-218ENST00000523328 RPS6P62753 249 aaKnown RBP26.78■■□□□ 1.88
PVT1-218ENST00000523328 PHOSPHO2Q8TCD6 241 aa26.78■■□□□ 1.88
PVT1-218ENST00000523328 SCFD2Q8WU76 684 aa26.78■■□□□ 1.88
PVT1-218ENST00000523328 COPS5Q92905 334 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms