RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 PDGFCQ9NRA1 345 aa18.93■□□□□ 0.62
CLN8-206ENST00000523237 Q9Y3F1 56 aa18.93■□□□□ 0.62
CLN8-206ENST00000523237 RBM8AQ9Y5S9 174 aaKnown RBP18.93■□□□□ 0.62
CLN8-206ENST00000523237 B4DLN1 442 aa18.92■□□□□ 0.62
CLN8-206ENST00000523237 SOX1O00570 391 aaPredicted RBP18.92■□□□□ 0.62
CLN8-206ENST00000523237 SMPD1P17405 629 aa18.92■□□□□ 0.62
CLN8-206ENST00000523237 MRPL12P52815 198 aaKnown RBP18.92■□□□□ 0.62
CLN8-206ENST00000523237 QRICH1Q2TAL8 776 aa18.92■□□□□ 0.62
CLN8-206ENST00000523237 ANKRD33Q7Z3H0 272 aa18.92■□□□□ 0.62
CLN8-206ENST00000523237 SH3RF1Q7Z6J0 888 aa18.92■□□□□ 0.62
CLN8-206ENST00000523237 FBXO11Q86XK2 927 aa18.92■□□□□ 0.62
CLN8-206ENST00000523237 VTI1AQ96AJ9 217 aa18.92■□□□□ 0.62
CLN8-206ENST00000523237 JMJD4Q9H9V9 463 aa18.92■□□□□ 0.62
CLN8-206ENST00000523237 VAT1LQ9HCJ6 419 aa18.92■□□□□ 0.62
CLN8-206ENST00000523237 TAF6LQ9Y6J9 622 aa18.92■□□□□ 0.62
CLN8-206ENST00000523237 MROH7Q68CQ1 1323 aa18.92■□□□□ 0.62
CLN8-206ENST00000523237 TRIM43BA6NCK2 446 aa18.91■□□□□ 0.62
CLN8-206ENST00000523237 DCDC2CA8MYV0 355 aa18.91■□□□□ 0.62
CLN8-206ENST00000523237 KLRF2D3W0D1 207 aa18.91■□□□□ 0.62
CLN8-206ENST00000523237 CTAGE5O15320 804 aa18.91■□□□□ 0.62
CLN8-206ENST00000523237 BEX3Q00994 111 aa18.91■□□□□ 0.62
CLN8-206ENST00000523237 PDE4DQ08499 809 aa18.91■□□□□ 0.62
CLN8-206ENST00000523237 WTAPQ15007 396 aa18.91■□□□□ 0.62
CLN8-206ENST00000523237 STOX1Q6ZVD7 989 aa18.91■□□□□ 0.62
CLN8-206ENST00000523237 MCF2L2Q86YR7 1114 aa18.91■□□□□ 0.62
CLN8-206ENST00000523237 STAG2Q8N3U4 1231 aa18.91■□□□□ 0.62
CLN8-206ENST00000523237 TRIM43Q96BQ3 446 aaPredicted RBP18.91■□□□□ 0.62
CLN8-206ENST00000523237 LRCH3Q96II8 777 aa18.91■□□□□ 0.62
CLN8-206ENST00000523237 MRPL11Q9Y3B7 192 aaKnown RBP18.91■□□□□ 0.62
CLN8-206ENST00000523237 A0A0U1RQG5 324 aaPredicted RBP18.9■□□□□ 0.62
CLN8-206ENST00000523237 DYNC1LI2O43237 492 aaPredicted RBP18.9■□□□□ 0.62
CLN8-206ENST00000523237 ZEB2O60315 1214 aa18.9■□□□□ 0.62
CLN8-206ENST00000523237 FSCN1Q16658 493 aaKnown RBP18.9■□□□□ 0.62
CLN8-206ENST00000523237 DUSP28Q4G0W2 176 aa18.9■□□□□ 0.62
CLN8-206ENST00000523237 BMP2KLQ5H9B9 411 aa18.9■□□□□ 0.62
CLN8-206ENST00000523237 BADQ92934 168 aa18.9■□□□□ 0.62
CLN8-206ENST00000523237 ESYT1Q9BSJ8 1104 aa18.9■□□□□ 0.62
CLN8-206ENST00000523237 MAD2L2Q9UI95 211 aa18.9■□□□□ 0.62
CLN8-206ENST00000523237 PALM3A6NDB9 673 aaPredicted RBP18.89■□□□□ 0.61
CLN8-206ENST00000523237 KIAA0355O15063 1070 aa18.89■□□□□ 0.61
CLN8-206ENST00000523237 CABYRO75952 493 aa18.89■□□□□ 0.61
CLN8-206ENST00000523237 EDNRBP24530 442 aa18.89■□□□□ 0.61
CLN8-206ENST00000523237 GRM4Q14833 912 aa18.89■□□□□ 0.61
CLN8-206ENST00000523237 TMEM67Q5HYA8 995 aa18.89■□□□□ 0.61
CLN8-206ENST00000523237 CHST3Q7LGC8 479 aa18.89■□□□□ 0.61
CLN8-206ENST00000523237 AMNQ9BXJ7 453 aa18.89■□□□□ 0.61
CLN8-206ENST00000523237 WDR11Q9BZH6 1224 aa18.89■□□□□ 0.61
CLN8-206ENST00000523237 LSG1Q9H089 658 aaKnown RBP18.89■□□□□ 0.61
CLN8-206ENST00000523237 TMEM39AQ9NV64 488 aa18.89■□□□□ 0.61
CLN8-206ENST00000523237 RBM47A0AV96 593 aaKnown RBP18.88■□□□□ 0.61
CLN8-206ENST00000523237 ARVCFO00192 962 aa18.88■□□□□ 0.61
CLN8-206ENST00000523237 RAG1P15918 1043 aa18.88■□□□□ 0.61
CLN8-206ENST00000523237 CDK7P50613 346 aa18.88■□□□□ 0.61
CLN8-206ENST00000523237 FAAP100Q0VG06 881 aa18.88■□□□□ 0.61
CLN8-206ENST00000523237 GPR153Q6NV75 609 aa18.88■□□□□ 0.61
CLN8-206ENST00000523237 CATIPQ7Z7H3 387 aa18.88■□□□□ 0.61
CLN8-206ENST00000523237 MB21D2Q8IYB1 491 aaPredicted RBP18.88■□□□□ 0.61
CLN8-206ENST00000523237 ZBTB5O15062 677 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 PTGS1P23219 599 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 ANTXR2P58335 489 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 TMEM63BQ5T3F8 832 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 KIAA1217Q5T5P2 1943 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 CXCL17Q6UXB2 119 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 SYTL5Q8TDW5 730 aaPredicted RBP18.87■□□□□ 0.61
CLN8-206ENST00000523237 IGDCC4Q8TDY8 1250 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 NSUN6Q8TEA1 469 aaKnown RBP18.87■□□□□ 0.61
CLN8-206ENST00000523237 SCFD2Q8WU76 684 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 TBC1D5Q92609 795 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 MTMR8Q96EF0 704 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 MTA3Q9BTC8 594 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 SENP2Q9HC62 589 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 ANO2Q9NQ90 1003 aa18.87■□□□□ 0.61
CLN8-206ENST00000523237 NKRFO15226 690 aaKnown RBP eCLIP18.86■□□□□ 0.61
CLN8-206ENST00000523237 TLR3O15455 904 aaKnown RBP18.86■□□□□ 0.61
CLN8-206ENST00000523237 ITGB8P26012 769 aa18.86■□□□□ 0.61
CLN8-206ENST00000523237 TROAPQ12815 778 aa18.86■□□□□ 0.61
CLN8-206ENST00000523237 TRAF1Q13077 416 aa18.86■□□□□ 0.61
CLN8-206ENST00000523237 PPP2R5BQ15173 497 aa18.86■□□□□ 0.61
CLN8-206ENST00000523237 CASC1Q6TDU7 716 aa18.86■□□□□ 0.61
CLN8-206ENST00000523237 SKAP1Q86WV1 359 aa18.86■□□□□ 0.61
CLN8-206ENST00000523237 SEZ6LQ9BYH1 1024 aa18.86■□□□□ 0.61
CLN8-206ENST00000523237 PCDHA1Q9Y5I3 950 aa18.86■□□□□ 0.61
CLN8-206ENST00000523237 SZT2Q5T011 3432 aa18.86■□□□□ 0.61
CLN8-206ENST00000523237 SLC27A2O14975 620 aa18.85■□□□□ 0.61
CLN8-206ENST00000523237 CFBP00751 764 aa18.85■□□□□ 0.61
CLN8-206ENST00000523237 CPT1AP50416 773 aa18.85■□□□□ 0.61
CLN8-206ENST00000523237 HOMER1Q86YM7 354 aa18.85■□□□□ 0.61
CLN8-206ENST00000523237 FAM126BQ8IXS8 530 aa18.85■□□□□ 0.61
CLN8-206ENST00000523237 OR6J1Q8NGC5 347 aa18.85■□□□□ 0.61
CLN8-206ENST00000523237 TAAR1Q96RJ0 339 aa18.85■□□□□ 0.61
CLN8-206ENST00000523237 IWS1Q96ST2 819 aa18.85■□□□□ 0.61
CLN8-206ENST00000523237 RMDN3Q96TC7 470 aa18.85■□□□□ 0.61
CLN8-206ENST00000523237 RIOX1Q9H6W3 641 aa18.85■□□□□ 0.61
CLN8-206ENST00000523237 TBX21Q9UL17 535 aa18.85■□□□□ 0.61
CLN8-206ENST00000523237 BAZ2BQ9UIF8 2168 aaKnown RBP18.85■□□□□ 0.61
CLN8-206ENST00000523237 PRC1O43663 620 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 PPP1R11O60927 126 aaPredicted RBP18.84■□□□□ 0.61
CLN8-206ENST00000523237 TXNP10599 105 aaKnown RBP18.84■□□□□ 0.61
CLN8-206ENST00000523237 MCM5P33992 734 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 FPGSQ05932 587 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms