RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 TBC1D5Q92609 795 aa17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 RAVER2Q9HCJ3 691 aaKnown RBP17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 CTAGE5O15320 804 aa17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 SLC37A4O43826 429 aa17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 CFBP00751 764 aa17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 ICAM1P05362 532 aa17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 FMR1Q06787 632 aaKnown RBP eCLIP17.54■□□□□ 0.41e-6■■■□□ 16.3
CTNNA1-236ENST00000522792 AP3B2Q13367 1082 aa17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 L1TD1Q5T7N2 865 aaKnown RBP17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 RNF214Q8ND24 703 aa17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 ATG4CQ96DT6 458 aa17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 WNK4Q96J92 1243 aa17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 RRAGCQ9HB90 399 aa17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 MRPL11Q9Y3B7 192 aaKnown RBP17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 SPDYE3A6NKU9 549 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 TRAF5O00463 557 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 POLR2DO15514 142 aaKnown RBP17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 OR52Z1P0C646 297 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 MRE11P49959 708 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 LONRF3Q496Y0 759 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 DTHD1Q6ZMT9 781 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 FCHSD1Q86WN1 690 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 ANKRD13AQ8IZ07 590 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 OTUD5Q96G74 571 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 ZNF408Q9H9D4 720 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 SLC38A10Q9HBR0 1119 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 CTDP1Q9Y5B0 961 aaPredicted RBP17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 ABCB11O95342 1321 aa17.53■□□□□ 0.4
CTNNA1-236ENST00000522792 CCDC192P0DO97 292 aa17.52■□□□□ 0.4
CTNNA1-236ENST00000522792 TYRO3Q06418 890 aa17.52■□□□□ 0.4
CTNNA1-236ENST00000522792 MYH7BA7E2Y1 1941 aa17.52■□□□□ 0.4
CTNNA1-236ENST00000522792 A0A087X0B3 334 aa17.52■□□□□ 0.39
CTNNA1-236ENST00000522792 LAD1O00515 517 aa17.52■□□□□ 0.39
CTNNA1-236ENST00000522792 SASS6Q6UVJ0 657 aa17.52■□□□□ 0.39
CTNNA1-236ENST00000522792 KRBA2Q6ZNG9 492 aa17.52■□□□□ 0.39
CTNNA1-236ENST00000522792 CNNM3Q8NE01 707 aa17.52■□□□□ 0.39
CTNNA1-236ENST00000522792 TIGD1Q96MW7 591 aa17.52■□□□□ 0.39
CTNNA1-236ENST00000522792 HOMER2Q9NSB8 354 aa17.52■□□□□ 0.39
CTNNA1-236ENST00000522792 PARP14Q460N5 1801 aa17.52■□□□□ 0.39
CTNNA1-236ENST00000522792 A0A087WWV3 80 aa17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 ZBED4O75132 1171 aa17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 XRCC6P12956 609 aaKnown RBP eCLIP17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 ALAS1P13196 640 aa17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 CDC25AP30304 524 aa17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 LONP1P36776 959 aaKnown RBP17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 ORC2Q13416 577 aaPredicted RBP17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 CALCRLQ16602 461 aa17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 RBM46Q8TBY0 533 aaKnown RBP17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 DHX58Q96C10 678 aa17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 DDX25Q9UHL0 483 aaKnown RBP17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 SERTAD1Q9UHV2 236 aa17.51■□□□□ 0.39
CTNNA1-236ENST00000522792 PP2D1A8MPX8 630 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 GCOM1H8Y6P7 765 aaPredicted RBP17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 PIK3CDO00329 1044 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 VWA5AO00534 786 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 POLR2MP0CAP2 368 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 PRPHP41219 470 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 ARHGAP4P98171 946 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 SH3D19Q5HYK7 790 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 MCTP2Q6DN12 878 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 PPP4R3AQ6IN85 833 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 ARMC9Q7Z3E5 817 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 IRF6O14896 467 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 FOSP01100 380 aaPredicted RBP17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 MYCNP04198 464 aaPredicted RBP17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 TXKP42681 527 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 TREML2Q5T2D2 321 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 CATSPERGQ6ZRH7 1159 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 ERO1BQ86YB8 467 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 ZNF526Q8TF50 670 aaPredicted RBP17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 UIMC1Q96RL1 719 aa17.5■□□□□ 0.39
CTNNA1-236ENST00000522792 NFIBO00712 420 aa17.49■□□□□ 0.39
CTNNA1-236ENST00000522792 FOXN1O15353 648 aa17.49■□□□□ 0.39
CTNNA1-236ENST00000522792 DSG3P32926 999 aa17.49■□□□□ 0.39
CTNNA1-236ENST00000522792 TECP42680 631 aa17.49■□□□□ 0.39
CTNNA1-236ENST00000522792 PPATQ06203 517 aa17.49■□□□□ 0.39
CTNNA1-236ENST00000522792 GADL1Q6ZQY3 521 aa17.49■□□□□ 0.39
CTNNA1-236ENST00000522792 MTMR9Q96QG7 549 aa17.49■□□□□ 0.39
CTNNA1-236ENST00000522792 RLFQ13129 1914 aa17.49■□□□□ 0.39
CTNNA1-236ENST00000522792 SPDYE5A6NIY4 337 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 GCFC2P16383 781 aaKnown RBP17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 SREBF1P36956 1147 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 USP11P51784 963 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 PNOCQ13519 176 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 COG2Q14746 738 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 MUM1L1Q5H9M0 696 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 CRYGNQ8WXF5 182 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 CLEC4DQ8WXI8 215 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 GJA10Q969M2 543 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 PTPRFP10586 1907 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 ACTN4O43707 911 aaKnown RBP17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 ANO6Q4KMQ2 910 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 GRAMD1CQ8IYS0 662 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 OPTNQ96CV9 577 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 KIAA1468Q9P260 1216 aa17.48■□□□□ 0.39
CTNNA1-236ENST00000522792 UBXN2AP68543 259 aa17.47■□□□□ 0.39
CTNNA1-236ENST00000522792 NAP1L4Q99733 375 aaKnown RBP17.47■□□□□ 0.39
CTNNA1-236ENST00000522792 NMRK2Q9NPI5 230 aa17.47■□□□□ 0.39
CTNNA1-236ENST00000522792 COL11A1P12107 1806 aaPredicted RBP17.47■□□□□ 0.39
CTNNA1-236ENST00000522792 BIN1O00499 593 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms