RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	SEPT14	Q6ZU15	432 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	CPLX4	Q7Z7G2	160 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	MAP7D3	Q8IWC1	876 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	TPH2	Q8IWU9	490 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	PARD3B	Q8TEW8	1205 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	RABGGTA	Q92696	567 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	CCDC42	Q96M95	316 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	PA2G4	Q9UQ80	394 aa	Known RBP	11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	AFG3L2	Q9Y4W6	797 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	MED7	O43513	233 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	SKI	P12755	728 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	VAV2	P52735	878 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	RAD51	Q06609	339 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	UBE3C	Q15386	1083 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	TSHZ3	Q63HK5	1081 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	DSTYK	Q6XUX3	929 aa		11.32	□□□□□ -0.6
TCF7-223	ENST00000522653	EFCAB8	A8MWE9	144 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	USP17L12	C9JPN9	530 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	USP17L21	D6R901	530 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	TXK	P42681	527 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	KRT33B	Q14525	404 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	SLFN12L	Q6IEE8	588 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	CEP85	Q6P2H3	762 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	NKX2-3	Q8TAU0	364 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	SMC6	Q96SB8	1091 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	METTL14	Q9HCE5	456 aa	Known RBP	11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	HERC5	Q9UII4	1024 aa	Known RBP	11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	EIF3CL	B5ME19	914 aa	Known RBP	11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	STXBP3	O00186	592 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	RARB	P10826	455 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	GBP1	P32455	592 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	PHKA2	P46019	1235 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	GEN1	Q17RS7	908 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	C8orf58	Q8NAV2	365 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	EIF3C	Q99613	913 aa	Known RBP	11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	JRKL	Q9Y4A0	524 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	LRRIQ4	A6NIV6	560 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	SPATS2	Q86XZ4	545 aa	Known RBP	11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	POLR3E	Q9NVU0	708 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	ABCB11	O95342	1321 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	MKRN3	Q13064	507 aa	Known RBP	11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	DRP2	Q13474	957 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	NUDT12	Q9BQG2	462 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	C2orf40	Q9H1Z8	148 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	LCMT1	Q9UIC8	334 aa		11.31	□□□□□ -0.6
TCF7-223	ENST00000522653	CHL1	O00533	1208 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	STAM2	O75886	525 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	CELF2	O95319	508 aa	Known RBP	11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	GCNT3	O95395	438 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	RGS2	P41220	211 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	DNA2	P51530	1060 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	PTPA	Q15257	358 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	AP1AR	Q63HQ0	302 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	RYBP	Q8N488	228 aa	Predicted RBP	11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	CCDC24	Q8N4L8	307 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	TRIM11	Q96F44	468 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	DYRK4	Q9NR20	520 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	PTPRT	O14522	1441 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	MANSC4	A6NHS7	340 aa	Predicted RBP	11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	ARHGAP6	O43182	974 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	SPOP	O43791	374 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	ZNF18	P17022	549 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	MYL5	Q02045	173 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	FAM160A1	Q05DH4	1040 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	ARHGAP15	Q53QZ3	475 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	SESTD1	Q86VW0	696 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	FBF1	Q8TES7	1133 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	RAB23	Q9ULC3	237 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	PCDHB8	Q9UN66	801 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653		V9GY48	417 aa	Predicted RBP	11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	SHROOM2	Q13796	1616 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	SETSIP	P0DME0	302 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	HSPD1	P10809	573 aa	Known RBP	11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	LACTB	P83111	547 aa	Predicted RBP	11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	MECOM	Q03112	1051 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	PPP1R7	Q15435	360 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	SLC15A2	Q16348	729 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	SYCE1	Q8N0S2	351 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	SECISBP2L	Q93073	1101 aa	Known RBP	11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	NAPG	Q99747	312 aa	Predicted RBP	11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	PYCARD	Q9ULZ3	195 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	ERBB3	P21860	1342 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	SUPT20HL2	P0C7V6	817 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	ATP5J	P18859	108 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	BFSP2	Q13515	415 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	RAB42	Q8N4Z0	105 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	SH3TC2	Q8TF17	1288 aa		11.3	□□□□□ -0.6
TCF7-223	ENST00000522653	TSPOAP1	O95153	1857 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	HEG1	Q9ULI3	1381 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	BUB1B	O60566	1050 aa	Predicted RBP	11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	KPNA6	O60684	536 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	CYBB	P04839	570 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	DDX5	P17844	614 aa	Known RBP	11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	NR1H3	Q13133	447 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	ICE2	Q659A1	982 aa		11.29	□□□□□ -0.6
TCF7-223	ENST00000522653	CREB3L3	Q68CJ9	461 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms