RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 DHTKD1Q96HY7 919 aaPredicted RBP15.19■□□□□ 0.02
SYNPO-205ENST00000522122 AXIN2Q9Y2T1 843 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 MRRFQ96E11 262 aaKnown RBP15.19■□□□□ 0.02
SYNPO-205ENST00000522122 PPANQ9NQ55 473 aaKnown RBP15.19■□□□□ 0.02
SYNPO-205ENST00000522122 UBN2Q6ZU65 1347 aa15.19■□□□□ 0.02
SYNPO-205ENST00000522122 GAS7O60861 476 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 COBLO75128 1261 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 GAS8O95995 478 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 FDPSP14324 419 aaKnown RBP15.18■□□□□ 0.02
SYNPO-205ENST00000522122 CDC27P30260 824 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 ADAM9Q13443 819 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 PNMA8AQ86V59 439 aaPredicted RBP15.18■□□□□ 0.02
SYNPO-205ENST00000522122 METTL16Q86W50 562 aaKnown RBP15.18■□□□□ 0.02
SYNPO-205ENST00000522122 VSIG1Q86XK7 387 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 BCAS4Q8TDM0 211 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 DPF2Q92785 391 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 METTL14Q9HCE5 456 aaKnown RBP15.18■□□□□ 0.02
SYNPO-205ENST00000522122 PARP2Q9UGN5 583 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 DLG5Q8TDM6 1919 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 MROH7-TTC4A0A0A0MT08 1334 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 FRMPD2Q68DX3 1309 aaPredicted RBP15.18■□□□□ 0.02
SYNPO-205ENST00000522122 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 TRPC3Q13507 836 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 STAG1Q8WVM7 1258 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 STRBPQ96SI9 672 aaKnown RBP15.18■□□□□ 0.02
SYNPO-205ENST00000522122 A0A1B0GUA9 196 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 CYP27B1O15528 508 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 ATP11AP98196 1134 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 PRR16Q569H4 304 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 CARD10Q9BWT7 1032 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 L2HGDHQ9H9P8 463 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 ABCB6Q9NP58 842 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 ENC1O14682 589 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 PRKAB2O43741 272 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 DCUN1D2Q6PH85 259 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 LCORLQ8N3X6 602 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 MAIP1Q8WWC4 291 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 TEKT1Q969V4 418 aa15.18■□□□□ 0.02
SYNPO-205ENST00000522122 NAA25Q14CX7 972 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 FYB2Q5VWT5 728 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 LRRC47Q8N1G4 583 aaKnown RBP15.17■□□□□ 0.02
SYNPO-205ENST00000522122 AK8Q96MA6 479 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 CAPS2Q9BXY5 557 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 CYP2J2P51589 502 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 SLFN12Q8IYM2 578 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 IWS1Q96ST2 819 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 DDX25Q9UHL0 483 aaKnown RBP15.17■□□□□ 0.02
SYNPO-205ENST00000522122 PCDHA4Q9UN74 947 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 LOC102724428A0A0B4J2F2 783 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 RGS16O15492 202 aaPredicted RBP15.17■□□□□ 0.02
SYNPO-205ENST00000522122 CHGBP05060 677 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 SIK1P57059 783 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 ALX1Q15699 326 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 NSMFQ6X4W1 530 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 NLRP10Q86W26 655 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 USTQ9Y2C2 406 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 RNF40O75150 1001 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 CYP2C19P33261 490 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 KAZALD1Q96I82 304 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 THAP9Q9H5L6 903 aa15.17■□□□□ 0.02
SYNPO-205ENST00000522122 HGSO14964 777 aaPredicted RBP15.16■□□□□ 0.02
SYNPO-205ENST00000522122 MYL1P05976 194 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 BTDP43251 543 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 CASP8Q14790 479 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 KRT31Q15323 416 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 CCDC14Q49A88 953 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 TCP11X2Q5H9J9 407 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 SGMS1Q86VZ5 419 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 RASGRP4Q8TDF6 673 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 P2RX5Q93086 422 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 ATP1A2P50993 1020 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 CHURC1Q8WUH1 139 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 STMN2Q93045 179 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 MTA3Q9BTC8 594 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 PRDM4Q9UKN5 801 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 COL4A3BPQ9Y5P4 624 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 ZNF804BA4D1E1 1349 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 ATP2B4P23634 1241 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
SYNPO-205ENST00000522122 SPATA24Q86W54 205 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.16■□□□□ 0.02
SYNPO-205ENST00000522122 CDHR2Q9BYE9 1310 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 ZNF354CQ86Y25 554 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 ELOA2Q8IYF1 753 aaPredicted RBP15.16■□□□□ 0.02
SYNPO-205ENST00000522122 WDR17Q8IZU2 1322 aa15.16■□□□□ 0.02
SYNPO-205ENST00000522122 LARP4BQ92615 738 aaKnown RBP15.15■□□□□ 0.02
SYNPO-205ENST00000522122 EPSTI1Q96J88 318 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 HINFPQ9BQA5 517 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 LMTK3Q96Q04 1460 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 NDUFA10O95299 355 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 KRT15P19012 456 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 DYNLL1P63167 89 aaKnown RBP15.15■□□□□ 0.02
SYNPO-205ENST00000522122 EHHADHQ08426 723 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 HHATQ5VTY9 493 aa15.15■□□□□ 0.02
SYNPO-205ENST00000522122 AKAP12Q02952 1782 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms