RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 CLEC10AQ8IUN9 316 aa10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 HERC6Q8IVU3 1022 aa10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 NEK9Q8TD19 979 aa10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 NOL10Q9BSC4 688 aaKnown RBP10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 RIPK3Q9Y572 518 aa10.86□□□□□ -0.67
TRAPPC9-212ENST00000521944 CHD8Q9HCK8 2581 aa10.85□□□□□ -0.67
TRAPPC9-212ENST00000521944 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC9-212ENST00000521944 PSMC6P62333 389 aa10.85□□□□□ -0.67
TRAPPC9-212ENST00000521944 TMCO2Q7Z6W1 182 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC9-212ENST00000521944 DEFB128Q7Z7B8 93 aa10.85□□□□□ -0.67
TRAPPC9-212ENST00000521944 PHOSPHO2Q8TCD6 241 aa10.85□□□□□ -0.67
TRAPPC9-212ENST00000521944 MFSD14AQ96MC6 490 aa10.85□□□□□ -0.67
TRAPPC9-212ENST00000521944 TMEM134Q9H6X4 195 aa10.85□□□□□ -0.67
TRAPPC9-212ENST00000521944 CABP5Q9NP86 173 aa10.85□□□□□ -0.67
TRAPPC9-212ENST00000521944 PIH1D3Q9NQM4 214 aaKnown RBP10.85□□□□□ -0.67
TRAPPC9-212ENST00000521944 AKAP2Q9Y2D5 859 aa10.85□□□□□ -0.67
TRAPPC9-212ENST00000521944 PTPRCP08575 1304 aa10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 PTPRSQ13332 1948 aa10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 EP300Q09472 2414 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 ZNF292O60281 2723 aa10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 VWA5AO00534 786 aa10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 GFRA3O60609 400 aa10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 CYP2C9P11712 490 aa10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 TMEM63BQ5T3F8 832 aa10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 SWT1Q5T5J6 900 aaKnown RBP10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 KRI1Q8N9T8 703 aaKnown RBP10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 MIGA1Q8NAN2 632 aa10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 SLC9A7Q96T83 725 aa10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 TRMT13Q9NUP7 481 aaKnown RBP10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 GNEQ9Y223 722 aaKnown RBP10.84□□□□□ -0.67
TRAPPC9-212ENST00000521944 H3BQ06 376 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 RNF40O75150 1001 aa10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 ZMYND10O75800 440 aa10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 PFKMP08237 780 aa10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 UBTFL1P0CB47 393 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 IRS1P35568 1242 aa10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 SSH1Q8WYL5 1049 aa10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 ALDH8A1Q9H2A2 487 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 ABHD16BQ9H3Z7 469 aa10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 VCPKMTQ9H867 229 aa10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 FAM86C1Q9NVL1 165 aa10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 TMX2Q9Y320 296 aa10.83□□□□□ -0.68
TRAPPC9-212ENST00000521944 DMXL1Q9Y485 3027 aa10.82□□□□□ -0.68
TRAPPC9-212ENST00000521944 ACACBO00763 2458 aa10.82□□□□□ -0.68
TRAPPC9-212ENST00000521944 CHD6Q8TD26 2715 aa10.82□□□□□ -0.68
TRAPPC9-212ENST00000521944 CYP7A1P22680 504 aa10.82□□□□□ -0.68
TRAPPC9-212ENST00000521944 GPNMBQ14956 572 aa10.82□□□□□ -0.68
TRAPPC9-212ENST00000521944 TTC6Q86TZ1 520 aa10.82□□□□□ -0.68
TRAPPC9-212ENST00000521944 SPC25Q9HBM1 224 aa10.82□□□□□ -0.68
TRAPPC9-212ENST00000521944 MUTYHQ9UIF7 546 aa10.82□□□□□ -0.68
TRAPPC9-212ENST00000521944 MTUS1Q9ULD2 1270 aa10.82□□□□□ -0.68
TRAPPC9-212ENST00000521944 ZNF536O15090 1300 aa10.82□□□□□ -0.68
TRAPPC9-212ENST00000521944 CFAP47Q6ZTR5 3102 aa10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 CABYRO75952 493 aa10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 UQCRFS1P1P0C7P4 283 aa10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 USP5P45974 858 aa10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 ERVK-21P61565 698 aa10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 COL19A1Q14993 1142 aa10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 FSCN1Q16658 493 aaKnown RBP10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 HERC4Q5GLZ8 1057 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 GORABQ5T7V8 394 aa10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 ARMCX2Q7L311 632 aa10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 BMP8AQ7Z5Y6 402 aa10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 MAGEB6Q8N7X4 407 aa10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 PPP1R9AQ9ULJ8 1098 aa10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 DDX49Q9Y6V7 483 aaKnown RBP10.81□□□□□ -0.68
TRAPPC9-212ENST00000521944 BAHCC1Q9P281 2608 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 KIF28PB7ZC32 967 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 MPHOSPH10O00566 681 aaKnown RBP10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 WDR46O15213 610 aaKnown RBP10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 KRT37O76014 449 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 RGS20O76081 388 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 IQCF3P0C7M6 154 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 SMPD1P17405 629 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 ZAP70P43403 619 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 TCTN1Q2MV58 587 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 ADHFE1Q8IWW8 467 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 CCDC144CPQ8IYA2 1237 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 MEIS3Q99687 375 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 PRR14Q9BWN1 585 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 PLXNA3P51805 1871 aa10.8□□□□□ -0.68
TRAPPC9-212ENST00000521944 SPTBN2O15020 2390 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 LINC01553A4QN01 128 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 CYP2D6P10635 497 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 AKR1B1P15121 316 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 LTBRP36941 435 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 DEFB103AP81534 67 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 TNFAIP2Q03169 654 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 PUS10Q3MIT2 529 aaKnown RBP10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 TMEM179Q6ZVK1 233 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 PPP1R13LQ8WUF5 828 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 EDAQ92838 391 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 DDX11Q96FC9 970 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 DBNDD2Q9BQY9 259 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 RIOK1Q9BRS2 568 aaKnown RBP10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 PRKAG3Q9UGI9 489 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 TNKSO95271 1327 aa10.79□□□□□ -0.68
TRAPPC9-212ENST00000521944 DYNC1LI2O43237 492 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 SRGAP3O43295 1099 aa10.78□□□□□ -0.68
TRAPPC9-212ENST00000521944 ACTN1P12814 892 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms