RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SPZ1Q9BXG8 430 aa23.96■■□□□ 1.43
TRIM35-203ENST00000521253 USP26Q9BXU7 913 aa23.96■■□□□ 1.43
TRIM35-203ENST00000521253 LCTP09848 1927 aa23.96■■□□□ 1.43
TRIM35-203ENST00000521253 CEP290O15078 2479 aa23.95■■□□□ 1.43
TRIM35-203ENST00000521253 MCM3APO60318 1980 aa23.95■■□□□ 1.42
TRIM35-203ENST00000521253 LOC102724159A0A0B4J2E5 919 aa23.95■■□□□ 1.42
TRIM35-203ENST00000521253 PNMA6FA0A0J9YX94 578 aa23.95■■□□□ 1.42
TRIM35-203ENST00000521253 OPLAHO14841 1288 aa23.95■■□□□ 1.42
TRIM35-203ENST00000521253 GNAQP50148 359 aa23.95■■□□□ 1.42
TRIM35-203ENST00000521253 PWP2Q15269 919 aaKnown RBP23.95■■□□□ 1.42
TRIM35-203ENST00000521253 EEPD1Q7L9B9 569 aa23.95■■□□□ 1.42
TRIM35-203ENST00000521253 MICU3Q86XE3 530 aa23.95■■□□□ 1.42
TRIM35-203ENST00000521253 FBXO16Q8IX29 292 aaPredicted RBP23.95■■□□□ 1.42
TRIM35-203ENST00000521253 FANCBQ8NB91 859 aa23.95■■□□□ 1.42
TRIM35-203ENST00000521253 SYTL5Q8TDW5 730 aaPredicted RBP23.95■■□□□ 1.42
TRIM35-203ENST00000521253 PIBF1Q8WXW3 757 aa23.95■■□□□ 1.42
TRIM35-203ENST00000521253 LZTS2Q9BRK4 669 aa23.95■■□□□ 1.42
TRIM35-203ENST00000521253 SENP6Q9GZR1 1112 aaPredicted RBP23.95■■□□□ 1.42
TRIM35-203ENST00000521253 BRPF3Q9ULD4 1205 aa23.95■■□□□ 1.42
TRIM35-203ENST00000521253 KBTBD13C9JR72 458 aa23.94■■□□□ 1.42
TRIM35-203ENST00000521253 EVI5O60447 810 aa23.94■■□□□ 1.42
TRIM35-203ENST00000521253 DUSP11O75319 330 aaKnown RBP23.94■■□□□ 1.42
TRIM35-203ENST00000521253 SMARCA1P28370 1054 aa23.94■■□□□ 1.42
TRIM35-203ENST00000521253 APOA5Q6Q788 366 aa23.94■■□□□ 1.42
TRIM35-203ENST00000521253 SYNE3Q6ZMZ3 975 aa23.94■■□□□ 1.42
TRIM35-203ENST00000521253 CMTR1Q8N1G2 835 aaKnown RBP23.94■■□□□ 1.42
TRIM35-203ENST00000521253 SRBD1Q8N5C6 995 aaKnown RBP23.94■■□□□ 1.42
TRIM35-203ENST00000521253 DNERQ8NFT8 737 aa23.94■■□□□ 1.42
TRIM35-203ENST00000521253 COL20A1Q9P218 1284 aa23.94■■□□□ 1.42
TRIM35-203ENST00000521253 SYNRGQ9UMZ2 1314 aa23.93■■□□□ 1.42
TRIM35-203ENST00000521253 H0YGN5 161 aa23.93■■□□□ 1.42
TRIM35-203ENST00000521253 ADAMTS4O75173 837 aa23.93■■□□□ 1.42
TRIM35-203ENST00000521253 ADCYAP1R1P41586 468 aa23.93■■□□□ 1.42
TRIM35-203ENST00000521253 TRAF1Q13077 416 aa23.93■■□□□ 1.42
TRIM35-203ENST00000521253 BLOC1S2Q6QNY1 142 aa23.93■■□□□ 1.42
TRIM35-203ENST00000521253 RNF180Q86T96 592 aa23.93■■□□□ 1.42
TRIM35-203ENST00000521253 VTA1Q9NP79 307 aa23.93■■□□□ 1.42
TRIM35-203ENST00000521253 PDGFCQ9NRA1 345 aa23.93■■□□□ 1.42
TRIM35-203ENST00000521253 BAZ2BQ9UIF8 2168 aaKnown RBP23.93■■□□□ 1.42
TRIM35-203ENST00000521253 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.92■■□□□ 1.42
TRIM35-203ENST00000521253 CFBP00751 764 aa23.92■■□□□ 1.42
TRIM35-203ENST00000521253 EDNRBP24530 442 aa23.92■■□□□ 1.42
TRIM35-203ENST00000521253 TAPT1Q6NXT6 567 aa23.92■■□□□ 1.42
TRIM35-203ENST00000521253 TMTC3Q6ZXV5 915 aa23.92■■□□□ 1.42
TRIM35-203ENST00000521253 RRP36Q96EU6 259 aaKnown RBP23.92■■□□□ 1.42
TRIM35-203ENST00000521253 TAAR1Q96RJ0 339 aa23.92■■□□□ 1.42
TRIM35-203ENST00000521253 NR2E3Q9Y5X4 410 aa23.92■■□□□ 1.42
TRIM35-203ENST00000521253 KLF18A0A0U1RQI7 1052 aa23.91■■□□□ 1.42
TRIM35-203ENST00000521253 RPS6KB1P23443 525 aa23.91■■□□□ 1.42
TRIM35-203ENST00000521253 HSD17B4P51659 736 aa23.91■■□□□ 1.42
TRIM35-203ENST00000521253 FGD1P98174 961 aa23.91■■□□□ 1.42
TRIM35-203ENST00000521253 GHRHRQ02643 423 aa23.91■■□□□ 1.42
TRIM35-203ENST00000521253 TNFAIP2Q03169 654 aa23.91■■□□□ 1.42
TRIM35-203ENST00000521253 LRRC26Q2I0M4 334 aa23.91■■□□□ 1.42
TRIM35-203ENST00000521253 Q6ZUG5 572 aa23.91■■□□□ 1.42
TRIM35-203ENST00000521253 MPHOSPH6Q99547 160 aaKnown RBP23.91■■□□□ 1.42
TRIM35-203ENST00000521253 ZBTB43O43298 467 aa23.9■■□□□ 1.42
TRIM35-203ENST00000521253 CASTP20810 708 aaKnown RBP23.9■■□□□ 1.42
TRIM35-203ENST00000521253 PSMA5P28066 241 aa23.9■■□□□ 1.42
TRIM35-203ENST00000521253 PDE4DQ08499 809 aa23.9■■□□□ 1.42
TRIM35-203ENST00000521253 CCDC82Q8N4S0 544 aa23.9■■□□□ 1.42
TRIM35-203ENST00000521253 KLHDC9Q8NEP7 349 aa23.9■■□□□ 1.42
TRIM35-203ENST00000521253 RMDN3Q96TC7 470 aa23.9■■□□□ 1.42
TRIM35-203ENST00000521253 PHF24Q9UPV7 400 aa23.9■■□□□ 1.42
TRIM35-203ENST00000521253 LRRC37A2A6NM11 1700 aa23.9■■□□□ 1.42
TRIM35-203ENST00000521253 MYH6P13533 1939 aa23.89■■□□□ 1.42
TRIM35-203ENST00000521253 MYADML2A6NDP7 307 aa23.89■■□□□ 1.41
TRIM35-203ENST00000521253 SMPD1P17405 629 aa23.89■■□□□ 1.41
TRIM35-203ENST00000521253 ATN1P54259 1190 aaPredicted RBP23.89■■□□□ 1.41
TRIM35-203ENST00000521253 GJA9P57773 515 aa23.89■■□□□ 1.41
TRIM35-203ENST00000521253 IRX5P78411 483 aaPredicted RBP23.89■■□□□ 1.41
TRIM35-203ENST00000521253 RTN1Q16799 776 aa23.89■■□□□ 1.41
TRIM35-203ENST00000521253 TMEM63BQ5T3F8 832 aa23.89■■□□□ 1.41
TRIM35-203ENST00000521253 IQSEC1Q6DN90 963 aa23.89■■□□□ 1.41
TRIM35-203ENST00000521253 NOL8Q76FK4 1167 aaKnown RBP23.89■■□□□ 1.41
TRIM35-203ENST00000521253 C7orf61Q8IZ16 206 aa23.89■■□□□ 1.41
TRIM35-203ENST00000521253 NSUN6Q8TEA1 469 aaKnown RBP23.89■■□□□ 1.41
TRIM35-203ENST00000521253 BRF1Q92994 677 aa23.89■■□□□ 1.41
TRIM35-203ENST00000521253 FERMT2Q96AC1 680 aa23.89■■□□□ 1.41
TRIM35-203ENST00000521253 UPF3AQ9H1J1 476 aaKnown RBP23.89■■□□□ 1.41
TRIM35-203ENST00000521253 SEC63Q9UGP8 760 aaKnown RBP23.89■■□□□ 1.41
TRIM35-203ENST00000521253 GNEQ9Y223 722 aaKnown RBP23.89■■□□□ 1.41
TRIM35-203ENST00000521253 B4DLN1 442 aa23.88■■□□□ 1.41
TRIM35-203ENST00000521253 C6orf222P0C671 652 aaPredicted RBP23.88■■□□□ 1.41
TRIM35-203ENST00000521253 PTGS1P23219 599 aa23.88■■□□□ 1.41
TRIM35-203ENST00000521253 HOXA13P31271 388 aaPredicted RBP23.88■■□□□ 1.41
TRIM35-203ENST00000521253 MRPL12P52815 198 aaKnown RBP23.88■■□□□ 1.41
TRIM35-203ENST00000521253 APOBRQ0VD83 1088 aa23.88■■□□□ 1.41
TRIM35-203ENST00000521253 CCSAPQ6IQ19 270 aaPredicted RBP23.88■■□□□ 1.41
TRIM35-203ENST00000521253 SPC25Q9HBM1 224 aa23.88■■□□□ 1.41
TRIM35-203ENST00000521253 RBM28Q9NW13 759 aaKnown RBP23.88■■□□□ 1.41
TRIM35-203ENST00000521253 MAP3K20Q9NYL2 800 aaKnown RBP23.88■■□□□ 1.41
TRIM35-203ENST00000521253 ALPK3Q96L96 1907 aa23.87■■□□□ 1.41
TRIM35-203ENST00000521253 hCG_1642624A0A1W2PR95 340 aa23.87■■□□□ 1.41
TRIM35-203ENST00000521253 GOLGA8AA7E2F4 631 aa23.87■■□□□ 1.41
TRIM35-203ENST00000521253 GOLGA8BA8MQT2 603 aa23.87■■□□□ 1.41
TRIM35-203ENST00000521253 GCOM1H8Y6P7 765 aaPredicted RBP23.87■■□□□ 1.41
TRIM35-203ENST00000521253 POLR2MP0CAP2 368 aa23.87■■□□□ 1.41
TRIM35-203ENST00000521253 CST5P28325 142 aaPredicted RBP23.87■■□□□ 1.41
TRIM35-203ENST00000521253 RCAN1P53805 252 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms