RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 ZNF292O60281 2723 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 KMT2BQ9UMN6 2715 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-209ENST00000520630 FRYLO94915 3013 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 LINC01553A4QN01 128 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 F5H6K3 240 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 SSTR3P32745 418 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-209ENST00000520630 IRS1P35568 1242 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 WDR5P61964 334 aaKnown RBP9.6□□□□□ -0.87
CSMD1-209ENST00000520630 PURAQ00577 322 aaKnown RBP9.6□□□□□ -0.87
CSMD1-209ENST00000520630 KLRC3Q07444 240 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 TCF15Q12870 199 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 COL19A1Q14993 1142 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 SLC9C2Q5TAH2 1124 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 FBXO16Q8IX29 292 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-209ENST00000520630 ANKRD35Q8N283 1001 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 PRPF38AQ8NAV1 312 aaKnown RBP9.6□□□□□ -0.87
CSMD1-209ENST00000520630 CCDC17Q96LX7 622 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 SEZ6LQ9BYH1 1024 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 KANSL2Q9H9L4 492 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 A1CFQ9NQ94 594 aaKnown RBP9.6□□□□□ -0.87
CSMD1-209ENST00000520630 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
CSMD1-209ENST00000520630 CACNA1BQ00975 2339 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 IGKV6D-41A0A0C4DH26 115 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 USP17L12C9JPN9 530 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 USP17L21D6R901 530 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 H3BQ06 376 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-209ENST00000520630 SURF6O75683 361 aaKnown RBP9.59□□□□□ -0.87
CSMD1-209ENST00000520630 LTBRP36941 435 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 CSPP1Q1MSJ5 1256 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 TMED8Q6PL24 325 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-209ENST00000520630 EEPD1Q7L9B9 569 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 ITPRIPQ8IWB1 547 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 CHST13Q8NET6 341 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 MORC4Q8TE76 937 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 GOPCQ9HD26 462 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 DDX19BQ9UMR2 479 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 Q9Y3F1 56 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 TTC3P53804 2025 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 FANCMQ8IYD8 2048 aa9.59□□□□□ -0.87
CSMD1-209ENST00000520630 PITPNM1O00562 1244 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 RAD21O60216 631 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 ST18O60284 1047 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 ACTN1P12814 892 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 RASA1P20936 1047 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 RFC2P35250 354 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 MKRN4PQ13434 485 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-209ENST00000520630 AAMPQ13685 434 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 NBPF20Q3BBV1 942 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 IQSEC1Q6DN90 963 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 B4GALNT3Q6L9W6 998 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 CTR9Q6PD62 1173 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 NOL8Q76FK4 1167 aaKnown RBP9.58□□□□□ -0.88
CSMD1-209ENST00000520630 DHX38Q92620 1227 aaKnown RBP9.58□□□□□ -0.88
CSMD1-209ENST00000520630 C17orf80Q9BSJ5 609 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 AP5M1Q9H0R1 490 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 C1orf115Q9H7X2 142 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 HOMER2Q9NSB8 354 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 ZBTB40Q9NUA8 1239 aa9.58□□□□□ -0.88
CSMD1-209ENST00000520630 FNDC1Q4ZHG4 1894 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-209ENST00000520630 NBNO60934 754 aa9.57□□□□□ -0.88
CSMD1-209ENST00000520630 BAIAP3O94812 1187 aa9.57□□□□□ -0.88
CSMD1-209ENST00000520630 MBD4O95243 580 aa9.57□□□□□ -0.88
CSMD1-209ENST00000520630 GJB5O95377 273 aa9.57□□□□□ -0.88
CSMD1-209ENST00000520630 DUSP28Q4G0W2 176 aa9.57□□□□□ -0.88
CSMD1-209ENST00000520630 MUM1L1Q5H9M0 696 aa9.57□□□□□ -0.88
CSMD1-209ENST00000520630 TRAF7Q6Q0C0 670 aa9.57□□□□□ -0.88
CSMD1-209ENST00000520630 PIAS4Q8N2W9 510 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-209ENST00000520630 KIFC2Q96AC6 838 aa9.57□□□□□ -0.88
CSMD1-209ENST00000520630 ATP8A2Q9NTI2 1148 aa9.57□□□□□ -0.88
CSMD1-209ENST00000520630 NYAP2Q9P242 653 aa9.57□□□□□ -0.88
CSMD1-209ENST00000520630 MUTYHQ9UIF7 546 aa9.57□□□□□ -0.88
CSMD1-209ENST00000520630 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
CSMD1-209ENST00000520630 KIF28PB7ZC32 967 aa9.56□□□□□ -0.88
CSMD1-209ENST00000520630 ZBED4O75132 1171 aa9.56□□□□□ -0.88
CSMD1-209ENST00000520630 CXCL10P02778 98 aa9.56□□□□□ -0.88
CSMD1-209ENST00000520630 SUPT20HL2P0C7V6 817 aa9.56□□□□□ -0.88
CSMD1-209ENST00000520630 ADD2P35612 726 aa9.56□□□□□ -0.88
CSMD1-209ENST00000520630 OAZ1P54368 228 aa9.56□□□□□ -0.88
CSMD1-209ENST00000520630 DLX2Q07687 328 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-209ENST00000520630 OS9Q13438 667 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-209ENST00000520630 HERC4Q5GLZ8 1057 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-209ENST00000520630 MKL1Q969V6 931 aa9.56□□□□□ -0.88
CSMD1-209ENST00000520630 TGS1Q96RS0 853 aaKnown RBP9.56□□□□□ -0.88
CSMD1-209ENST00000520630 FTOQ9C0B1 505 aaKnown RBP eCLIP9.56□□□□□ -0.88
CSMD1-209ENST00000520630 FAM86C1Q9NVL1 165 aa9.56□□□□□ -0.88
CSMD1-209ENST00000520630 CYP39A1Q9NYL5 469 aa9.56□□□□□ -0.88
CSMD1-209ENST00000520630 FBXO40Q9UH90 709 aa9.56□□□□□ -0.88
CSMD1-209ENST00000520630 PCDHB15Q9Y5E8 787 aa9.56□□□□□ -0.88
CSMD1-209ENST00000520630 GVINP1Q7Z2Y8 2422 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 ASB14A6NK59 587 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 GOLIM4O00461 696 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 ZEB2O60315 1214 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 MYL3P08590 195 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 SNAP25P60880 206 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 MBTPS1Q14703 1052 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 TCEAL5Q5H9L2 206 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 NFRKBQ6P4R8 1299 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.55□□□□□ -0.88
CSMD1-209ENST00000520630 KIAA1211Q6ZU35 1233 aa9.55□□□□□ -0.88
CSMD1-209ENST00000520630 RASGRP2Q7LDG7 609 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms