RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 NACAP1Q9BZK3 213 aa11.04□□□□□ -0.64
CTNNA1-221ENST00000520339 ZNF287Q9HBT7 754 aa11.04□□□□□ -0.64
CTNNA1-221ENST00000520339 MTMR4Q9NYA4 1195 aa11.04□□□□□ -0.64
CTNNA1-221ENST00000520339 NRBP1Q9UHY1 535 aa11.04□□□□□ -0.64
CTNNA1-221ENST00000520339 SALL3Q9BXA9 1300 aa11.04□□□□□ -0.64
CTNNA1-221ENST00000520339 ATP2A1O14983 1001 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 FOXP2O15409 715 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 MX1P20591 662 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 KCTD2Q14681 263 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 LRIT3Q3SXY7 679 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 PRPF38AQ8NAV1 312 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 CRBNQ96SW2 442 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 TINF2Q9BSI4 451 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 FSD1Q9BTV5 496 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 TRAIPQ9BWF2 469 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 TEX13BQ9BXU2 312 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 UBE2OQ9C0C9 1292 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 IL21Q9HBE4 155 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 SYNPO2Q9UMS6 1093 aa11.03□□□□□ -0.64
CTNNA1-221ENST00000520339 TTLL1O95922 423 aa11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 ZNF865P0CJ78 1059 aaPredicted RBP11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 TAL1P17542 331 aaPredicted RBP11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 RTP1P59025 263 aa11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 PTK2Q05397 1052 aa11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 PPARAQ07869 468 aa11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 HDAC1Q13547 482 aaPredicted RBP11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 LRRC41Q15345 812 aa11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 ANKRD45Q5TZF3 282 aa11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 SLC39A5Q6ZMH5 540 aa11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 TDHQ8IZJ6 230 aa11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 GMCL1P1Q8NEA9 526 aa11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 SLC6A16Q9GZN6 736 aa11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 RIPK3Q9Y572 518 aa11.02□□□□□ -0.65
CTNNA1-221ENST00000520339 DNAJC25-GNG10A0A024R161 153 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 KBTBD13C9JR72 458 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 ZBED4O75132 1171 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 TFAP4Q01664 338 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 PDE4BQ07343 736 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 SNX17Q15036 470 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 FAM47AQ5JRC9 791 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 SLFN13Q68D06 897 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 SNRNP48Q6IEG0 339 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 PDXDC2PQ6P474 469 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 CCDC129Q6ZRS4 1044 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 LRRC47Q8N1G4 583 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 MSL3Q8N5Y2 521 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 KIFC2Q96AC6 838 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 NAPBQ9H115 298 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 SLC38A10Q9HBR0 1119 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 FEM1BQ9UK73 627 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 PLIN4Q96Q06 1357 aa11.01□□□□□ -0.65
CTNNA1-221ENST00000520339 NAV1Q8NEY1 1877 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 SNAI1O95863 264 aaPredicted RBP11□□□□□ -0.65
CTNNA1-221ENST00000520339 SLC3A2P08195 630 aaKnown RBP11□□□□□ -0.65
CTNNA1-221ENST00000520339 TSPY3P0CV98 308 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 TSPY8P0CW00 308 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 RARBP10826 455 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 ADCYAP1R1P41586 468 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 PDE1AP54750 535 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 PTCRAQ6ISU1 281 aaPredicted RBP11□□□□□ -0.65
CTNNA1-221ENST00000520339 POTEGQ6S5H5 508 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 CPXCR1Q8N123 301 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 GPKOWQ92917 476 aaPredicted RBP eCLIP11□□□□□ -0.65
CTNNA1-221ENST00000520339 EVI5LQ96CN4 794 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 RAVER2Q9HCJ3 691 aaKnown RBP11□□□□□ -0.65
CTNNA1-221ENST00000520339 XPNPEP3Q9NQH7 507 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 INCENPQ9NQS7 918 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 PHF24Q9UPV7 400 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 GPSM3Q9Y4H4 160 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 MAFBQ9Y5Q3 323 aaPredicted RBP11□□□□□ -0.65
CTNNA1-221ENST00000520339 TACC3Q9Y6A5 838 aa11□□□□□ -0.65
CTNNA1-221ENST00000520339 SZT2Q5T011 3432 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 PGK1P00558 417 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 BMP3P12645 472 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 NOVP48745 357 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 OAZ1P54368 228 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 ALX1Q15699 326 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 TRIM60Q495X7 471 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 VPS53Q5VIR6 699 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 C1orf53Q5VUE5 145 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 MAMDC4Q6UXC1 1216 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 CHST13Q8NET6 341 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 FERMT2Q96AC1 680 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 DDX11Q96FC9 970 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 GMCL1Q96IK5 515 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 LBHD1Q9BQE6 289 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 IL17RBQ9NRM6 502 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 ANAPC4Q9UJX5 808 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 ATP11BQ9Y2G3 1177 aa10.99□□□□□ -0.65
CTNNA1-221ENST00000520339 RLFQ13129 1914 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 TMEM232C9JQI7 657 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 ATP9BO43861 1147 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 PLA2G6O60733 806 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 ADAMTS4O75173 837 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 FGRP09769 529 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 AKR1A1P14550 325 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 RNF180Q86T96 592 aa10.98□□□□□ -0.65
CTNNA1-221ENST00000520339 TICAM2Q86XR7 235 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms