RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 PSMA7O14818 248 aa28.89■■■□□ 2.22
COL13A1-213ENST00000520267 ASIC1P78348 528 aa28.89■■■□□ 2.22
COL13A1-213ENST00000520267 PDE4DQ08499 809 aa28.89■■■□□ 2.22
COL13A1-213ENST00000520267 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.89■■■□□ 2.22
COL13A1-213ENST00000520267 MYH7BA7E2Y1 1941 aa28.89■■■□□ 2.21
COL13A1-213ENST00000520267 ZNF772Q68DY9 489 aaPredicted RBP28.89■■■□□ 2.21
COL13A1-213ENST00000520267 TTI2Q6NXR4 508 aa28.89■■■□□ 2.21
COL13A1-213ENST00000520267 LRRN4CLQ8ND94 238 aa28.89■■■□□ 2.21
COL13A1-213ENST00000520267 SRRTQ9BXP5 876 aaKnown RBP28.89■■■□□ 2.21
COL13A1-213ENST00000520267 EEF2P13639 858 aaKnown RBP28.88■■■□□ 2.21
COL13A1-213ENST00000520267 HDLBPQ00341 1268 aaKnown RBP28.88■■■□□ 2.21
COL13A1-213ENST00000520267 CNGA4Q8IV77 575 aa28.88■■■□□ 2.21
COL13A1-213ENST00000520267 TRIM47Q96LD4 638 aa28.88■■■□□ 2.21
COL13A1-213ENST00000520267 PNMA5Q96PV4 448 aa28.88■■■□□ 2.21
COL13A1-213ENST00000520267 EXOC1Q9NV70 894 aa28.88■■■□□ 2.21
COL13A1-213ENST00000520267 PI4KBQ9UBF8 816 aa28.88■■■□□ 2.21
COL13A1-213ENST00000520267 RNF225M0QZC1 329 aaPredicted RBP28.87■■■□□ 2.21
COL13A1-213ENST00000520267 CERKLQ49MI3 558 aaPredicted RBP28.87■■■□□ 2.21
COL13A1-213ENST00000520267 ZSCAN29Q8IWY8 852 aaPredicted RBP28.87■■■□□ 2.21
COL13A1-213ENST00000520267 CUL5Q93034 780 aa28.87■■■□□ 2.21
COL13A1-213ENST00000520267 MRPL44Q9H9J2 332 aaKnown RBP28.87■■■□□ 2.21
COL13A1-213ENST00000520267 RAD21O60216 631 aa28.87■■■□□ 2.21
COL13A1-213ENST00000520267 STK4Q13043 487 aa28.87■■■□□ 2.21
COL13A1-213ENST00000520267 DHTKD1Q96HY7 919 aaPredicted RBP28.87■■■□□ 2.21
COL13A1-213ENST00000520267 THAP9Q9H5L6 903 aa28.87■■■□□ 2.21
COL13A1-213ENST00000520267 BLOC1S4Q9NUP1 217 aa28.87■■■□□ 2.21
COL13A1-213ENST00000520267 AOC3Q16853 763 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 TMEM266Q2M3C6 531 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 MKL1Q969V6 931 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 CCDC47Q96A33 483 aaKnown RBP28.86■■■□□ 2.21
COL13A1-213ENST00000520267 CCDC51Q96ER9 411 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 DUSP9Q99956 384 aaKnown RBP28.86■■■□□ 2.21
COL13A1-213ENST00000520267 POTEMA6NI47 508 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 FCER1AP12319 257 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 AMPD3Q01432 767 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 UBXN1Q04323 297 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 ELF2Q15723 593 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 PPP4R3AQ6IN85 833 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 WDR24Q96S15 920 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 ADGRG1Q9Y653 693 aa28.86■■■□□ 2.21
COL13A1-213ENST00000520267 TPM1P09493 284 aa28.85■■■□□ 2.21
COL13A1-213ENST00000520267 FECHP22830 423 aa28.85■■■□□ 2.21
COL13A1-213ENST00000520267 MRPL12P52815 198 aaKnown RBP28.85■■■□□ 2.21
COL13A1-213ENST00000520267 GNG11P61952 73 aa28.85■■■□□ 2.21
COL13A1-213ENST00000520267 PSTPIP2Q9H939 334 aa28.85■■■□□ 2.21
COL13A1-213ENST00000520267 NYAP2Q9P242 653 aa28.85■■■□□ 2.21
COL13A1-213ENST00000520267 URI1O94763 535 aaPredicted RBP28.85■■■□□ 2.21
COL13A1-213ENST00000520267 CCDC175P0C221 793 aa28.85■■■□□ 2.21
COL13A1-213ENST00000520267 EEF1GP26641 437 aaKnown RBP28.85■■■□□ 2.21
COL13A1-213ENST00000520267 MCM6Q14566 821 aa28.85■■■□□ 2.21
COL13A1-213ENST00000520267 SIAH1Q8IUQ4 282 aa28.85■■■□□ 2.21
COL13A1-213ENST00000520267 NUDT12Q9BQG2 462 aa28.85■■■□□ 2.21
COL13A1-213ENST00000520267 CGNQ9P2M7 1197 aaKnown RBP28.85■■■□□ 2.21
COL13A1-213ENST00000520267 PDIA5Q14554 519 aa28.84■■■□□ 2.21
COL13A1-213ENST00000520267 SEPT2Q15019 361 aa28.84■■■□□ 2.21
COL13A1-213ENST00000520267 TATDN1Q6P1N9 297 aa28.84■■■□□ 2.21
COL13A1-213ENST00000520267 SV2BQ7L1I2 683 aa28.84■■■□□ 2.21
COL13A1-213ENST00000520267 P2RX5Q93086 422 aa28.84■■■□□ 2.21
COL13A1-213ENST00000520267 KANSL2Q9H9L4 492 aa28.84■■■□□ 2.21
COL13A1-213ENST00000520267 ABHD10Q9NUJ1 306 aa28.84■■■□□ 2.21
COL13A1-213ENST00000520267 SERPINA10Q9UK55 444 aa28.84■■■□□ 2.21
COL13A1-213ENST00000520267 TNS1Q9HBL0 1735 aaKnown RBP28.84■■■□□ 2.21
COL13A1-213ENST00000520267 QRICH1Q2TAL8 776 aa28.83■■■□□ 2.21
COL13A1-213ENST00000520267 SLFN13Q68D06 897 aa28.83■■■□□ 2.21
COL13A1-213ENST00000520267 HPS3Q969F9 1004 aa28.83■■■□□ 2.21
COL13A1-213ENST00000520267 NUP88Q99567 741 aaPredicted RBP28.83■■■□□ 2.21
COL13A1-213ENST00000520267 DDX25Q9UHL0 483 aaKnown RBP28.83■■■□□ 2.21
COL13A1-213ENST00000520267 ARFGEF1Q9Y6D6 1849 aa28.83■■■□□ 2.21
COL13A1-213ENST00000520267 MYMKA6NI61 221 aa28.83■■■□□ 2.21
COL13A1-213ENST00000520267 CCNE1P24864 410 aa28.83■■■□□ 2.21
COL13A1-213ENST00000520267 SLC1A4P43007 532 aa28.83■■■□□ 2.21
COL13A1-213ENST00000520267 ANKRD40Q6AI12 368 aa28.83■■■□□ 2.21
COL13A1-213ENST00000520267 MB21D1Q8N884 522 aa28.83■■■□□ 2.21
COL13A1-213ENST00000520267 C7orf43Q8WVR3 580 aa28.83■■■□□ 2.21
COL13A1-213ENST00000520267 STK17AQ9UEE5 414 aa28.83■■■□□ 2.21
COL13A1-213ENST00000520267 LGALS16A8MUM7 142 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 TRIM14Q14142 442 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 CSGALNACT2Q8N6G5 542 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 DCAF4Q8WV16 495 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 HAS1Q92839 578 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 TRIM34Q9BYJ4 488 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 RAB34Q9BZG1 259 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 ATF5Q9Y2D1 282 aaPredicted RBP28.82■■■□□ 2.2
COL13A1-213ENST00000520267 A0A0U1RQJ8 604 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 CASQ1P31415 396 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 ERVK-24P63145 666 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 KIAA0895Q8NCT3 520 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 ZNF507Q8TCN5 953 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 SNX29Q8TEQ0 813 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 NOC3LQ8WTT2 800 aaKnown RBP28.82■■■□□ 2.2
COL13A1-213ENST00000520267 ATRIPQ8WXE1 791 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 CNKSR1Q969H4 720 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 GJA10Q969M2 543 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 CDK5RAP3Q96JB5 506 aa28.82■■■□□ 2.2
COL13A1-213ENST00000520267 TDRD3Q9H7E2 651 aaKnown RBP28.82■■■□□ 2.2
COL13A1-213ENST00000520267 GDF11O95390 407 aa28.81■■■□□ 2.2
COL13A1-213ENST00000520267 LARP4BQ92615 738 aaKnown RBP28.81■■■□□ 2.2
COL13A1-213ENST00000520267 EEF2KMTQ96G04 330 aa28.81■■■□□ 2.2
COL13A1-213ENST00000520267 MAGEC2Q9UBF1 373 aaPredicted RBP28.81■■■□□ 2.2
COL13A1-213ENST00000520267 NPM3O75607 178 aaKnown RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms