RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 IKBKEQ14164 716 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 ZNF423Q2M1K9 1284 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 FAM117BQ6P1L5 589 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 PRR23CQ6ZRP0 262 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 CCDC129Q6ZRS4 1044 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 DNAJC10Q8IXB1 793 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 VGLL2Q8N8G2 317 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 C3orf58Q8NDZ4 430 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 DDX54Q8TDD1 881 aaKnown RBP5.39□□□□□ -1.55
PABPC1-212ENST00000519622 JAKMIP1Q96N16 626 aaKnown RBP5.39□□□□□ -1.55
PABPC1-212ENST00000519622 FUCA2Q9BTY2 467 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 AGXT2Q9BYV1 514 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 CLEC4MQ9H2X3 399 aaPredicted RBP5.39□□□□□ -1.55
PABPC1-212ENST00000519622 KCNK4Q9NYG8 393 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 ASAP1Q9ULH1 1129 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 LIMCH1Q9UPQ0 1083 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 AKAP2Q9Y2D5 859 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 MAST3O60307 1309 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 UBN2Q6ZU65 1347 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 CDHR2Q9BYE9 1310 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 SALL1Q9NSC2 1324 aa5.39□□□□□ -1.55
PABPC1-212ENST00000519622 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 EYA2O00167 538 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 DDX3YO15523 660 aaKnown RBP5.38□□□□□ -1.55
PABPC1-212ENST00000519622 ADAM11O75078 769 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 FBXO24O75426 580 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 WISP1O95388 367 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 F13A1P00488 732 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 ZSCAN22P10073 491 aaPredicted RBP5.38□□□□□ -1.55
PABPC1-212ENST00000519622 CYP19A1P11511 503 aaPredicted RBP5.38□□□□□ -1.55
PABPC1-212ENST00000519622 CASTP20810 708 aaKnown RBP5.38□□□□□ -1.55
PABPC1-212ENST00000519622 SYT1P21579 422 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 ADORA1P30542 326 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 ZNF157P51786 506 aaPredicted RBP5.38□□□□□ -1.55
PABPC1-212ENST00000519622 PIP4K2BP78356 416 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 FGD1P98174 961 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 NEXNQ0ZGT2 675 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 G3BP1Q13283 466 aaKnown RBP eCLIP5.38□□□□□ -1.551e-12■□□□□ 11.1
PABPC1-212ENST00000519622 OS9Q13438 667 aaPredicted RBP5.38□□□□□ -1.55
PABPC1-212ENST00000519622 LRP8Q14114 963 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 HLFQ16534 295 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 CAVIN1Q6NZI2 390 aaKnown RBP5.38□□□□□ -1.55
PABPC1-212ENST00000519622 TOM1L2Q6ZVM7 507 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 TTC5Q8N0Z6 440 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 SYNE4Q8N205 404 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 KBTBD3Q8NAB2 608 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 CCDC191Q8NCU4 936 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.38□□□□□ -1.55
PABPC1-212ENST00000519622 KLHDC7BQ96G42 594 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 TCEANC2Q96MN5 208 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 MRPL18Q9H0U6 180 aaKnown RBP5.38□□□□□ -1.55
PABPC1-212ENST00000519622 SEC31BQ9NQW1 1179 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 DIAPH3Q9NSV4 1193 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 CWC25Q9NXE8 425 aaPredicted RBP5.38□□□□□ -1.55
PABPC1-212ENST00000519622 FAM8A1Q9UBU6 413 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 ABCC12Q96J65 1359 aa5.38□□□□□ -1.55
PABPC1-212ENST00000519622 TNRC6CQ9HCJ0 1690 aaKnown RBP5.37□□□□□ -1.55
PABPC1-212ENST00000519622 SBF2Q86WG5 1849 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 M0R2C6 588 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 GIPC1O14908 333 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 CTDNEP1O95476 244 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 PCCAP05165 728 aaPredicted RBP5.37□□□□□ -1.55
PABPC1-212ENST00000519622 HSP90AA1P07900 732 aaKnown RBP5.37□□□□□ -1.55
PABPC1-212ENST00000519622 CYP21A2P08686 494 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 GSTT1P30711 240 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 NLRP12P59046 1061 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 EXOSC10Q01780 885 aaKnown RBP5.37□□□□□ -1.55
PABPC1-212ENST00000519622 RESTQ13127 1097 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 TCIRG1Q13488 830 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 LRSAM1Q6UWE0 723 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 Q6ZS46 218 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 DDX46Q7L014 1031 aaKnown RBP5.37□□□□□ -1.55
PABPC1-212ENST00000519622 TMC4Q7Z404 712 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 USP48Q86UV5 1035 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 CCDC83Q8IWF9 413 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 NECAB1Q8N987 351 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 GPATCH3Q96I76 525 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 FRMD6Q96NE9 622 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 UBL7Q96S82 380 aaPredicted RBP5.37□□□□□ -1.55
PABPC1-212ENST00000519622 FSD1Q9BTV5 496 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 SRA1Q9HD15 236 aaKnown RBP5.37□□□□□ -1.55
PABPC1-212ENST00000519622 PDRG1Q9NUG6 133 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 VTI1BQ9UEU0 232 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 GPN3Q9UHW5 284 aaPredicted RBP5.37□□□□□ -1.55
PABPC1-212ENST00000519622 HDAC5Q9UQL6 1122 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 CNPY2Q9Y2B0 182 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 ZBTB1Q9Y2K1 713 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 AK5Q9Y6K8 562 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 DDX49Q9Y6V7 483 aaKnown RBP5.37□□□□□ -1.55
PABPC1-212ENST00000519622 MAP3K15Q6ZN16 1313 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 WDR33Q9C0J8 1336 aaKnown RBP5.37□□□□□ -1.55
PABPC1-212ENST00000519622 COL1A1P02452 1464 aaPredicted RBP5.37□□□□□ -1.55
PABPC1-212ENST00000519622 NHSQ6T4R5 1651 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 CACNA1SQ13698 1873 aa5.37□□□□□ -1.55
PABPC1-212ENST00000519622 RBM47A0AV96 593 aaKnown RBP5.36□□□□□ -1.55
PABPC1-212ENST00000519622 HIP1O00291 1037 aa5.36□□□□□ -1.55
PABPC1-212ENST00000519622 AP5Z1O43299 807 aa5.36□□□□□ -1.55
PABPC1-212ENST00000519622 STX6O43752 255 aa5.36□□□□□ -1.55
PABPC1-212ENST00000519622 JAK2O60674 1132 aa5.36□□□□□ -1.55
PABPC1-212ENST00000519622 B3GALT4O96024 378 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms