RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 KLHL14Q9P2G3 628 aa5.83□□□□□ -1.48
SKP1-205ENST00000519054 NPHS1O60500 1241 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 PPP1R11O60927 126 aaPredicted RBP5.82□□□□□ -1.48
SKP1-205ENST00000519054 TSPAN15O95858 294 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 KRT1P04264 644 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 DBHP09172 617 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 C1QTNF9P0C862 333 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 RAP1GAPP47736 663 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 GFRA1P56159 465 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 YBX1P67809 324 aaKnown RBP5.82□□□□□ -1.48
SKP1-205ENST00000519054 SF3A1Q15459 793 aaKnown RBP5.82□□□□□ -1.48
SKP1-205ENST00000519054 INF2Q27J81 1249 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 RPTNQ6XPR3 784 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 ATG14Q6ZNE5 492 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 TMC6Q7Z403 805 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 TMEM145Q8NBT3 493 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 BHLHE22Q8NFJ8 381 aaPredicted RBP5.82□□□□□ -1.48
SKP1-205ENST00000519054 MMP19Q99542 508 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 SIRT5Q9NXA8 310 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 FBLN5Q9UBX5 448 aa5.82□□□□□ -1.48
SKP1-205ENST00000519054 TMEFF2Q9UIK5 374 aaPredicted RBP5.82□□□□□ -1.48
SKP1-205ENST00000519054 TEX51A0A1B0GUA7 166 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 ABLIM1O14639 778 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 SEMA7AO75326 666 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 SCG5P05408 212 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 YBX3P16989 372 aaKnown RBP eCLIP5.81□□□□□ -1.481e-12■■□□□ 13.5
SKP1-205ENST00000519054 DLG4P78352 724 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 NBPF6Q5VWK0 638 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 OLFML2BQ68BL8 750 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 CCDC103Q8IW40 242 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 LZTR1Q8N653 840 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 KREMEN2Q8NCW0 462 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 ST13P5Q8NFI4 369 aaPredicted RBP5.81□□□□□ -1.48
SKP1-205ENST00000519054 USP33Q8TEY7 942 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 ARMC5Q96C12 935 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 NBPF4Q96M43 638 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 CCDC140Q96MF4 163 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 IER2Q9BTL4 223 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 RXFP1Q9HBX9 757 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 BTG4Q9NY30 223 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 MBD1Q9UIS9 605 aaPredicted RBP5.81□□□□□ -1.48
SKP1-205ENST00000519054 MSRB2Q9Y3D2 182 aa5.81□□□□□ -1.48
SKP1-205ENST00000519054 IQCA1LA6NCM1 817 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 TCAF2A6NFQ2 919 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 HRKO00198 91 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 ARNTLO00327 626 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 PDPK1O15530 556 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 MEFVO15553 781 aaPredicted RBP5.8□□□□□ -1.48
SKP1-205ENST00000519054 SRGAP3O43295 1099 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 CPP00450 1065 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 FUCA1P04066 466 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 CAPNS1P04632 268 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 CYBBP04839 570 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 MED14OSP0DP75 135 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 GLDCP23378 1020 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 RBL2Q08999 1139 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 TMEM62Q0P6H9 643 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 HSP90AA2PQ14568 343 aaPredicted RBP5.8□□□□□ -1.48
SKP1-205ENST00000519054 CBX2Q14781 532 aaPredicted RBP5.8□□□□□ -1.48
SKP1-205ENST00000519054 PLEKHN1Q494U1 663 aaPredicted RBP5.8□□□□□ -1.48
SKP1-205ENST00000519054 PAQR3Q6TCH7 311 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 SPATC1Q76KD6 591 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 CABP7Q86V35 215 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 PPIL6Q8IXY8 311 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 PMFBP1Q8TBY8 1022 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 SREK1Q8WXA9 508 aaKnown RBP5.8□□□□□ -1.48
SKP1-205ENST00000519054 DPF3Q92784 378 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 DIO2Q92813 273 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 SGSM3Q96HU1 749 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 MTA3Q9BTC8 594 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 GCM1Q9NP62 436 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 MARCH2Q9P0N8 246 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 SIRPGQ9P1W8 387 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 PFDN2Q9UHV9 154 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 HCFC2Q9Y5Z7 792 aa5.8□□□□□ -1.48
SKP1-205ENST00000519054 ZC3H12DA2A288 527 aaKnown RBP5.79□□□□□ -1.48
SKP1-205ENST00000519054 F8W031 263 aaPredicted RBP5.79□□□□□ -1.48
SKP1-205ENST00000519054 GLI4P10075 376 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 MAPKAPK2P49137 400 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 EPHB3P54753 998 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 SERINC3Q13530 473 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 NR1I3Q14994 352 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 MTERF2Q49AM1 385 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 E4F1Q66K89 784 aaPredicted RBP5.79□□□□□ -1.48
SKP1-205ENST00000519054 IQCEQ6IPM2 695 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 DENND5AQ6IQ26 1287 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 ZC3H14Q6PJT7 736 aaKnown RBP5.79□□□□□ -1.48
SKP1-205ENST00000519054 ANKLE2Q86XL3 938 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 KCTD13Q8WZ19 329 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 C1orf159Q96HA4 380 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 DNAJC2Q99543 621 aaKnown RBP5.79□□□□□ -1.48
SKP1-205ENST00000519054 AARSD1Q9BTE6 412 aaKnown RBP5.79□□□□□ -1.48
SKP1-205ENST00000519054 CNTD2Q9H8S5 307 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 CD320Q9NPF0 282 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 ARHGEF4Q9NR80 690 aa5.79□□□□□ -1.48
SKP1-205ENST00000519054 DBR1Q9UK59 544 aaKnown RBP5.79□□□□□ -1.48
SKP1-205ENST00000519054 SMG5Q9UPR3 1016 aaKnown RBP5.79□□□□□ -1.48
SKP1-205ENST00000519054 NPIPB6E9PJ23 425 aa5.78□□□□□ -1.48
SKP1-205ENST00000519054 PRODHO43272 600 aa5.78□□□□□ -1.48
SKP1-205ENST00000519054 PRR5P85299 388 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms