RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 NAT1P18440 290 aa6.55□□□□□ -1.36
SQLE-202ENST00000518604 NR0B2Q15466 257 aa6.55□□□□□ -1.36
SQLE-202ENST00000518604 PRSS53Q2L4Q9 553 aa6.55□□□□□ -1.36
SQLE-202ENST00000518604 RALGPS1Q5JS13 557 aa6.55□□□□□ -1.36
SQLE-202ENST00000518604 DENND5AQ6IQ26 1287 aa6.55□□□□□ -1.36
SQLE-202ENST00000518604 STYK1Q6J9G0 422 aa6.55□□□□□ -1.36
SQLE-202ENST00000518604 ZPBP2Q6X784 338 aa6.55□□□□□ -1.36
SQLE-202ENST00000518604 USP53Q70EK8 1073 aa6.55□□□□□ -1.36
SQLE-202ENST00000518604 NLGN2Q8NFZ4 835 aa6.55□□□□□ -1.36
SQLE-202ENST00000518604 HHIPL1Q96JK4 782 aa6.55□□□□□ -1.36
SQLE-202ENST00000518604 SLKQ9H2G2 1235 aaPredicted RBP6.55□□□□□ -1.36
SQLE-202ENST00000518604 PLAAQ9Y263 795 aa6.55□□□□□ -1.36
SQLE-202ENST00000518604 FITM1A5D6W6 292 aa6.54□□□□□ -1.36
SQLE-202ENST00000518604 WTIPA6NIX2 430 aaPredicted RBP6.54□□□□□ -1.36
SQLE-202ENST00000518604 AQP7O14520 342 aa6.54□□□□□ -1.36
SQLE-202ENST00000518604 APPP05067 770 aa6.54□□□□□ -1.36
SQLE-202ENST00000518604 C6orf222P0C671 652 aaPredicted RBP6.54□□□□□ -1.36
SQLE-202ENST00000518604 GTF2A2P52657 109 aa6.54□□□□□ -1.36
SQLE-202ENST00000518604 NTRK3Q16288 839 aa6.54□□□□□ -1.36
SQLE-202ENST00000518604 JAMLQ86YT9 394 aa6.54□□□□□ -1.36
SQLE-202ENST00000518604 FAM177A1Q8N128 213 aaPredicted RBP6.54□□□□□ -1.36
SQLE-202ENST00000518604 ZFP64Q9NPA5 681 aa6.54□□□□□ -1.36
SQLE-202ENST00000518604 MBNL3Q9NUK0 354 aaKnown RBP6.54□□□□□ -1.36
SQLE-202ENST00000518604 SCO2A0A1W2PP80 73 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 PPP1R12AO14974 1030 aaPredicted RBP6.53□□□□□ -1.36
SQLE-202ENST00000518604 NPHS1O60500 1241 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 HPXP02790 462 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 RAC2P15153 192 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 CEBPAP49715 358 aaPredicted RBP6.53□□□□□ -1.36
SQLE-202ENST00000518604 CORO7P57737 925 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 RTP1P59025 263 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 SNX17Q15036 470 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 SLC14A2Q15849 920 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 ZNF792Q3KQV3 632 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 GALNT18Q6P9A2 607 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 SLCO6A1Q86UG4 719 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 LILRA2Q8N149 483 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 EBF1Q9UH73 591 aa6.53□□□□□ -1.36
SQLE-202ENST00000518604 ARNTLO00327 626 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 MYO1BO43795 1136 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 NRDCO43847 1150 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 RNASE1P07998 156 aaKnown RBP6.52□□□□□ -1.37
SQLE-202ENST00000518604 HK2P52789 917 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 GP2P55259 537 aaKnown RBP6.52□□□□□ -1.37
SQLE-202ENST00000518604 GPR85P60893 370 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 LAPTM5Q13571 262 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 CEP128Q6ZU80 1094 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 CCDC103Q8IW40 242 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 IFNL3Q8IZI9 196 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 GSTCDQ8NEC7 633 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.52□□□□□ -1.37
SQLE-202ENST00000518604 ASIC4Q96FT7 647 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 PHF20Q9BVI0 1012 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 PRDM7Q9NQW5 492 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 INTS7Q9NVH2 962 aaKnown RBP6.52□□□□□ -1.37
SQLE-202ENST00000518604 SFMBT1Q9UHJ3 866 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 TMEFF2Q9UIK5 374 aaPredicted RBP6.52□□□□□ -1.37
SQLE-202ENST00000518604 ADAMTS6Q9UKP5 1117 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 PRKAB1Q9Y478 270 aa6.52□□□□□ -1.37
SQLE-202ENST00000518604 TIMM13Q9Y5L4 95 aaPredicted RBP6.52□□□□□ -1.37
SQLE-202ENST00000518604 C7orf72A4D263 438 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 TKFCQ3LXA3 575 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 CPNE8Q86YQ8 564 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 RCBTB1Q8NDN9 531 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 NINJ1Q92982 152 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 JMJD8Q96S16 334 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 KRTAP9-9Q9BYP9 154 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 KRTAP9-4Q9BYQ2 154 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 C19orf73Q9NVV2 129 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 CTNND2Q9UQB3 1225 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 CD2APQ9Y5K6 639 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 TAF6LQ9Y6J9 622 aa6.51□□□□□ -1.37
SQLE-202ENST00000518604 SBNO2Q9Y2G9 1366 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 BLACEA4D250 179 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 USP2O75604 605 aaPredicted RBP6.5□□□□□ -1.37
SQLE-202ENST00000518604 RAPGEF3O95398 923 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 AFMP43652 599 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 GYS2P54840 703 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 RPL11P62913 178 aaKnown RBP6.5□□□□□ -1.37
SQLE-202ENST00000518604 PABPC4Q13310 644 aaKnown RBP eCLIP6.5□□□□□ -1.378e-8■□□□□ 8.2
SQLE-202ENST00000518604 INF2Q27J81 1249 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 HSF5Q4G112 596 aaPredicted RBP6.5□□□□□ -1.37
SQLE-202ENST00000518604 DALRD3Q5D0E6 543 aaKnown RBP6.5□□□□□ -1.37
SQLE-202ENST00000518604 LBX2Q6XYB7 198 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 FLAD1Q8NFF5 587 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 SLC7A14Q8TBB6 771 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 MAGEB10Q96LZ2 347 aaPredicted RBP6.5□□□□□ -1.37
SQLE-202ENST00000518604 SLC52A2Q9HAB3 445 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 SP110Q9HB58 689 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 RC3H2Q9HBD1 1191 aaKnown RBP6.5□□□□□ -1.37
SQLE-202ENST00000518604 NDOR1Q9UHB4 597 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 ACSL6Q9UKU0 697 aa6.5□□□□□ -1.37
SQLE-202ENST00000518604 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.49□□□□□ -1.37
SQLE-202ENST00000518604 A0A1W2PQ27 194 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 A0A1W2PQ64 194 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 A0A1W2PQC6 194 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 A0A1W2PQD8 194 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 LSAMPQ13449 338 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 CBX2Q14781 532 aaPredicted RBP6.49□□□□□ -1.37
SQLE-202ENST00000518604 KIZQ2M2Z5 673 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms