RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 NOL8Q76FK4 1167 aaKnown RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 ARHGAP22Q7Z5H3 698 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 YTHDF3Q7Z739 585 aaKnown RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCNJLQ8IV13 435 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 IQCF2Q8IXL9 164 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 TMEM87AQ8NBN3 555 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCHCR1Q8TD31 782 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 RABGGTAQ92696 567 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCDC47Q96A33 483 aaKnown RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCDC74AQ96AQ1 378 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCDC114Q96M63 670 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 ALS2CR12Q96Q35 445 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 TCF12Q99081 682 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 NAP1L3Q99457 506 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 METTL22Q9BUU2 404 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 DNAJC25Q9H1X3 360 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 TMOD4Q9NZQ9 345 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 ORC3Q9UBD5 711 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 ACTL7BQ9Y614 415 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 TTC41PQ6P2S7 1318 aa5.44□□□□□ -1.54
HMGB1P19-201ENST00000517578 EPRSP07814 1512 aaKnown RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 A0A096LPE4 126 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 A0A1W2PPZ6 126 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 FAM170BA6NMN3 283 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 ENO4A6NNW6 628 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZSCAN9O15535 394 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 HMMRO75330 724 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 FSBPO95073 299 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 SKILP12757 684 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 PAX3P23760 479 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 MAPK8P45983 427 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 RAB27AP51159 221 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCNHP51946 323 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 PCDH1Q08174 1060 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 PRPF4BQ13523 1007 aaKnown RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 SNW1Q13573 536 aaKnown RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 NAA25Q14CX7 972 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 KIAA0753Q2KHM9 967 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 KBTBD12Q3ZCT8 623 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 CEP85LQ5SZL2 805 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 NUGGCQ68CJ6 796 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 ISM2Q6H9L7 571 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZSCAN25Q6NSZ9 544 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 CC2D1AQ6P1N0 951 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 VSIG10LQ86VR7 867 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 ANKRD13BQ86YJ7 626 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZSCAN29Q8IWY8 852 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 STK11IPQ8N1F8 1099 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCDC150Q8NCX0 1101 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 TRIM58Q8NG06 486 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 EPS8L3Q8TE67 593 aaKnown RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 ALKBH8Q96BT7 664 aaKnown RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 ARPC5LQ9BPX5 153 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 CLEC4MQ9H2X3 399 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 JADE2Q9NQC1 790 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 IMPACTQ9P2X3 320 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 FAN1Q9Y2M0 1017 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 ARHGAP35Q9NRY4 1499 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 PHLPP2Q6ZVD8 1323 aa5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 WDR33Q9C0J8 1336 aaKnown RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZNF644Q9H582 1327 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P19-201ENST00000517578 SAMD9Q5K651 1589 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 PNMA6FA0A0J9YX94 578 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 GOLGA6L4A6NEF3 574 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 TMEM232C9JQI7 657 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 ABLIM1O14639 778 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 MAP2K7O14733 419 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 NPHP1O15259 732 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 CYP26A1O43174 497 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 ECEL1O95672 775 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 FAM200BP0CF97 657 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 MAOBP27338 520 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 PAPOLAP51003 745 aaKnown RBP5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 APOBRQ0VD83 1088 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 CUL3Q13618 768 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 KRT72Q14CN4 511 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 POSTNQ15063 836 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 SNCBQ16143 134 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 ERCC6LQ2NKX8 1250 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 TSNAXIP1Q2TAA8 658 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 LONRF3Q496Y0 759 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 CCDC93Q567U6 631 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 KIAA0319Q5VV43 1072 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 CAPRIN2Q6IMN6 1127 aaKnown RBP5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 CEP57Q86XR8 500 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 NME8Q8N427 588 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 TEX9Q8N6V9 391 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 ATL2Q8NHH9 583 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 ANKRD24Q8TF21 1146 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 P3H4Q92791 437 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 KCNB2Q92953 911 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 ZKSCAN4Q969J2 545 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 SPDL1Q96EA4 605 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 THOC1Q96FV9 657 aaKnown RBP5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 FBXL18Q96ME1 805 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 MPHOSPH8Q99549 860 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 TRIM56Q9BRZ2 755 aaKnown RBP5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 YIPF2Q9BWQ6 316 aa5.42□□□□□ -1.54
HMGB1P19-201ENST00000517578 MAK16Q9BXY0 300 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms