RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 KIAA1024Q9UPX6 916 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 ABCB11O95342 1321 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 GCOM1H8Y6P7 765 aaPredicted RBP11□□□□□ -0.65
EFCAB13-203ENST00000517484 POLR2MP0CAP2 368 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 PLCG1P19174 1290 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 TPM4P67936 248 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 IRX3P78415 501 aaPredicted RBP11□□□□□ -0.65
EFCAB13-203ENST00000517484 PABPC4Q13310 644 aaKnown RBP eCLIP11□□□□□ -0.65
EFCAB13-203ENST00000517484 MCM6Q14566 821 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 SNRNP48Q6IEG0 339 aaKnown RBP11□□□□□ -0.65
EFCAB13-203ENST00000517484 ENGASEQ8NFI3 743 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 ZMYND12Q9H0C1 365 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 RGL1Q9NZL6 768 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 BCORQ6W2J9 1755 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 DCAF8L1A6NGE4 600 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 PPP6R2O75170 966 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 VCAM1P19320 739 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 ARHGAP4P98171 946 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 RESP18Q5W5W9 173 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 SMCR8Q8TEV9 937 aaPredicted RBP11□□□□□ -0.65
EFCAB13-203ENST00000517484 DPF2Q92785 391 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 SLC39A2Q9NP94 309 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 GDAQ9Y2T3 454 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 TMX2Q9Y320 296 aa11□□□□□ -0.65
EFCAB13-203ENST00000517484 LRP5O75197 1615 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 ZBED4O75132 1171 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 ARID5BQ14865 1188 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 ENOX2Q16206 610 aaKnown RBP10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 CCDC186Q7Z3E2 898 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 NELFCDQ8IXH7 590 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 ANKRD35Q8N283 1001 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 ZNF280CQ8ND82 737 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 DCAF4Q8WV16 495 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 ZNF592Q92610 1267 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 TMX1Q9H3N1 280 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 FANCLQ9NW38 375 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 CTAGE5O15320 804 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 AP5Z1O43299 807 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 RPS12P25398 132 aaKnown RBP10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 CTTNQ14247 550 aaKnown RBP10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 FAM177A1Q8N128 213 aaPredicted RBP10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 NPHP3-ACAD11A0A0J9YXS1 232 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 A0A1W2PQ27 194 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 A0A1W2PQ64 194 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 A0A1W2PQD8 194 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 E9PMD0 336 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 IRF6O14896 467 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 VGLL4Q14135 290 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 FAM83AQ86UY5 434 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 PLA2G4DQ86XP0 818 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 SLF1Q9BQI6 1058 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 MRIQ9BWK5 157 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.99□□□□□ -0.657e-8■■■■■ 186.3
EFCAB13-203ENST00000517484 CTNND2Q9UQB3 1225 aa10.99□□□□□ -0.65
EFCAB13-203ENST00000517484 CEP350Q5VT06 3117 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 POTEB3A0JP26 581 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 POTECB2RU33 542 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 ZBTB39O15060 712 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 PTGS1P23219 599 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 RCAN1P53805 252 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 TMED8Q6PL24 325 aaPredicted RBP10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 POTEBQ6S5H4 581 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 TMC6Q7Z403 805 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 PRPF38AQ8NAV1 312 aaKnown RBP10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 ANKS1AQ92625 1134 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 MMRN2Q9H8L6 949 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 TRMT1Q9NXH9 659 aaKnown RBP10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 RIPK3Q9Y572 518 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 SCN9AQ15858 1988 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 LAMB2P55268 1798 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 COL4A5P29400 1685 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 CCDC173Q0VFZ6 552 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 LRMPQ12912 555 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 BAATQ14032 418 aaPredicted RBP10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 MUM1L1Q5H9M0 696 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 APOBEC3FQ8IUX4 373 aaKnown RBP10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 FERMT2Q96AC1 680 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 PAGE5Q96GU1 130 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 TEPSINQ96N21 525 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 TRERF1Q96PN7 1200 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 ADARB2Q9NS39 739 aaKnown RBP10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 NFE2L3Q9Y4A8 694 aa10.98□□□□□ -0.65
EFCAB13-203ENST00000517484 POTEFA5A3E0 1075 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 PTPRAP18433 802 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 FKBP1AP62942 108 aaKnown RBP10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 ATP2C1P98194 919 aaPredicted RBP10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 PDE4DQ08499 809 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 POTEGQ6S5H5 508 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 POTEEQ6S8J3 1075 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 SAMSN1Q9NSI8 373 aaKnown RBP10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 DUOX1Q9NRD9 1551 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 IGKV6D-41A0A0C4DH26 115 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 PPP4R3BQ5MIZ7 849 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 ARHGEF16Q5VV41 709 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 SEPT14Q6ZU15 432 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 VPS16Q9H269 839 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 NMRK2Q9NPI5 230 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 EMILIN3Q9NT22 766 aa10.97□□□□□ -0.65
EFCAB13-203ENST00000517484 MAN1B1Q9UKM7 699 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms