RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 PTPDC1A2A3K4 754 aa17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 SNHG28P0DPA3 235 aa17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 CYP2C18P33260 490 aa17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 CPT1AP50416 773 aa17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 HAND2P61296 217 aa17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 GPATCH4Q5T3I0 446 aaKnown RBP17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 ZNF365Q70YC5 407 aa17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 HERVK_113Q902F9 699 aa17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 ESR2Q92731 530 aa17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 DDX49Q9Y6V7 483 aaKnown RBP17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 RAD50Q92878 1312 aa17.16■□□□□ 0.34
SCARNA20.5-201ENST00000516991 RBM47A0AV96 593 aaKnown RBP17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 B4DLN1 442 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 MRPL12P52815 198 aaKnown RBP17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 GRIN2CQ14957 1233 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 RAB30Q15771 203 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 BRDTQ58F21 947 aaPredicted RBP17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 CCDC178Q5BJE1 867 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 SLC30A10Q6XR72 485 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 RNF207Q6ZRF8 634 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 TBC1D10CQ8IV04 446 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 SMC5Q8IY18 1101 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 CLEC4DQ8WXI8 215 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 RILPL2Q969X0 211 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 NOC4LQ9BVI4 516 aaKnown RBP17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 WDR11Q9BZH6 1224 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 GRIN2DO15399 1336 aa17.15■□□□□ 0.34
SCARNA20.5-201ENST00000516991 NKRFO15226 690 aaKnown RBP eCLIP17.14■□□□□ 0.33
SCARNA20.5-201ENST00000516991 B4GALT4O60513 344 aa17.14■□□□□ 0.33
SCARNA20.5-201ENST00000516991 ACRP10323 421 aa17.14■□□□□ 0.33
SCARNA20.5-201ENST00000516991 CALML3P27482 149 aa17.14■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PDE4DQ08499 809 aa17.14■□□□□ 0.33
SCARNA20.5-201ENST00000516991 DNERQ8NFT8 737 aa17.14■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PURBQ96QR8 312 aaKnown RBP17.14■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PBX4Q9BYU1 374 aa17.14■□□□□ 0.33
SCARNA20.5-201ENST00000516991 MAF1Q9H063 256 aa17.14■□□□□ 0.33
SCARNA20.5-201ENST00000516991 RWDD1Q9H446 243 aaPredicted RBP17.14■□□□□ 0.33
SCARNA20.5-201ENST00000516991 MSRAQ9UJ68 235 aa17.14■□□□□ 0.33
SCARNA20.5-201ENST00000516991 FGBP02675 491 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 SUPT20HL2P0C7V6 817 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 SDSP20132 328 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 EDNRBP24530 442 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PPP2R5BQ15173 497 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 IQCA1Q86XH1 822 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 DGKHQ86XP1 1220 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 OR6J1Q8NGC5 347 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 SCFD2Q8WU76 684 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 GAS2L1Q99501 681 aaPredicted RBP17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 TRPV6Q9H1D0 765 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 ALDH8A1Q9H2A2 487 aaPredicted RBP17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 OSBPL3Q9H4L5 887 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 GPHNQ9NQX3 736 aaPredicted RBP17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 MYO9BQ13459 2157 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 CDH23Q9H251 3354 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 NEDD4P46934 1319 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
SCARNA20.5-201ENST00000516991 HIP1O00291 1037 aa17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 ZNF213O14771 459 aa17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 KPNA6O60684 536 aa17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PFKMP08237 780 aa17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PTGS1P23219 599 aa17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PSMC6P62333 389 aa17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 RPS6P62753 249 aaKnown RBP17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PURAQ00577 322 aaKnown RBP17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 RPUSD2Q8IZ73 545 aaKnown RBP17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 RGS22Q8NE09 1264 aa17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 MTG1Q9BT17 334 aaPredicted RBP17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 DIAPH3Q9NSV4 1193 aa17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 EYSQ5T1H1 3165 aa17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 UMODL1Q5DID0 1318 aa17.12■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PRUNE2Q8WUY3 3088 aa17.11■□□□□ 0.33
SCARNA20.5-201ENST00000516991 CCL23P55773 120 aa17.11■□□□□ 0.33
SCARNA20.5-201ENST00000516991 TMEM63BQ5T3F8 832 aa17.11■□□□□ 0.33
SCARNA20.5-201ENST00000516991 CHD1LQ86WJ1 897 aa17.11■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PNMA1Q8ND90 353 aa17.11■□□□□ 0.33
SCARNA20.5-201ENST00000516991 SYMPKQ92797 1274 aaKnown RBP17.11■□□□□ 0.33
SCARNA20.5-201ENST00000516991 WNT8AQ9H1J5 351 aa17.11■□□□□ 0.33
SCARNA20.5-201ENST00000516991 TNKSO95271 1327 aa17.11■□□□□ 0.33
SCARNA20.5-201ENST00000516991 TTC28Q96AY4 2481 aa17.1■□□□□ 0.33
SCARNA20.5-201ENST00000516991 GBF1Q92538 1859 aa17.1■□□□□ 0.33
SCARNA20.5-201ENST00000516991 GRXCR1A8MXD5 290 aa17.1■□□□□ 0.33
SCARNA20.5-201ENST00000516991 MYL3P08590 195 aa17.1■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PBX2P40425 430 aa17.1■□□□□ 0.33
SCARNA20.5-201ENST00000516991 ASPRV1Q53RT3 343 aa17.1■□□□□ 0.33
SCARNA20.5-201ENST00000516991 PLEKHM2Q8IWE5 1019 aa17.1■□□□□ 0.33
SCARNA20.5-201ENST00000516991 KAT14Q9H8E8 782 aa17.1■□□□□ 0.33
SCARNA20.5-201ENST00000516991 ABCB11O95342 1321 aa17.1■□□□□ 0.33
SCARNA20.5-201ENST00000516991 NUCB1Q02818 461 aa17.09■□□□□ 0.33
SCARNA20.5-201ENST00000516991 USH1GQ495M9 461 aa17.09■□□□□ 0.33
SCARNA20.5-201ENST00000516991 B4GALNT3Q6L9W6 998 aa17.09■□□□□ 0.33
SCARNA20.5-201ENST00000516991 NFRKBQ6P4R8 1299 aa17.09■□□□□ 0.33
SCARNA20.5-201ENST00000516991 OTOP2Q7RTS6 562 aa17.09■□□□□ 0.33
SCARNA20.5-201ENST00000516991 ZKSCAN3Q9BRR0 538 aa17.09■□□□□ 0.33
SCARNA20.5-201ENST00000516991 DSCC1Q9BVC3 393 aa17.09■□□□□ 0.33
SCARNA20.5-201ENST00000516991 CXXC1Q9P0U4 656 aaPredicted RBP17.09■□□□□ 0.33
SCARNA20.5-201ENST00000516991 SLC4A7Q9Y6M7 1214 aa17.09■□□□□ 0.33
SCARNA20.5-201ENST00000516991 TANC1Q9C0D5 1861 aa17.09■□□□□ 0.33
SCARNA20.5-201ENST00000516991 MYH6P13533 1939 aa17.09■□□□□ 0.33
SCARNA20.5-201ENST00000516991 A6NJR5 290 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms