RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.39□□□□□ -1.71
SCARNA16.2-201ENST00000516520 SUGT1Q9Y2Z0 365 aa4.39□□□□□ -1.71
SCARNA16.2-201ENST00000516520 OTOL1A6NHN0 477 aaPredicted RBP4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 STXBP3O00186 592 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 GLI4P10075 376 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 PAMP19021 973 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 LIMS1P48059 325 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 NASPP49321 788 aaPredicted RBP4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 PRR5P85299 388 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 SLC9A5Q14940 896 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 PPP2R5EQ16537 467 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 VMACQ2NL98 169 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 NT5DC4Q86YG4 428 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 ARHGEF39Q8N4T4 335 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 LZTR1Q8N653 840 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 NETO2Q8NC67 525 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 FEZF2Q8TBJ5 459 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 ALG3Q92685 438 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 TSPAN17Q96FV3 270 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 PEX11GQ96HA9 241 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 SEC16BQ96JE7 1060 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 TEPSINQ96N21 525 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 PMF1-BGLAPU3KQ54 211 aa4.38□□□□□ -1.71
SCARNA16.2-201ENST00000516520 ANKRD34BA5PLL1 514 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 C2orf71A6NGG8 1288 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 ZBTB7AO95365 584 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 KCNC1P48547 511 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 ZNF143P52747 638 aaPredicted RBP4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 CASP7P55210 303 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 FOXO4P98177 505 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 DPY19L1Q2PZI1 675 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 POMZP3Q6PJE2 187 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 FRMD5Q7Z6J6 570 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 KLHL6Q8WZ60 621 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 SHDQ96IW2 340 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 FGD4Q96M96 766 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 MCMBPQ9BTE3 642 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 SUSD2Q9UGT4 822 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 PCDHB10Q9UN67 800 aa4.37□□□□□ -1.71
SCARNA16.2-201ENST00000516520 NPHP3-ACAD11A0A0J9YXS1 232 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 FFAR3O14843 346 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 NPHS1O60500 1241 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 VAMP4O75379 141 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 CELA3BP08861 270 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 HDLBPQ00341 1268 aaKnown RBP4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 KIAA1211LQ6NV74 962 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 VHLLQ6RSH7 139 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 B3GNT8Q7Z7M8 397 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 TP53I13Q8NBR0 393 aaPredicted RBP4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 FNIP1Q8TF40 1166 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 RWDD3Q9Y3V2 267 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 HCFC2Q9Y5Z7 792 aa4.36□□□□□ -1.71
SCARNA16.2-201ENST00000516520 SH3D21A4FU49 640 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 ASGR2P07307 311 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 ATF2P15336 505 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 SLURP1P55000 103 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 HTRA3P83110 453 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 NCAPHQ15003 741 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 VWA3BQ502W6 1294 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 WWC2Q6AWC2 1192 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 LIPIQ6XZB0 460 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 SAPCD2Q86UD0 394 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 ZDHHC14Q8IZN3 488 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 SYT8Q8NBV8 401 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 USP33Q8TEY7 942 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 CPA5Q8WXQ8 436 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 MRRFQ96E11 262 aaKnown RBP4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 APBA2Q99767 749 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 MTA3Q9BTC8 594 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 TGIF2Q9GZN2 237 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 USP40Q9NVE5 1235 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 AKT3Q9Y243 479 aa4.35□□□□□ -1.71
SCARNA16.2-201ENST00000516520 NOP56O00567 594 aaKnown RBP4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 PLA2G1BP04054 148 aaKnown RBP4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 PMLP29590 882 aa4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 CPNE8Q86YQ8 564 aa4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 DCP2Q8IU60 420 aaKnown RBP4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 BVESQ8NE79 360 aa4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 BORCS6Q96GS4 357 aa4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 MMP19Q99542 508 aa4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 CCSER2Q9H7U1 834 aa4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 PCDH18Q9HCL0 1135 aa4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 GULP1Q9UBP9 304 aa4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 INPP5FQ9Y2H2 1132 aa4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 EMC9Q9Y3B6 208 aa4.34□□□□□ -1.71
SCARNA16.2-201ENST00000516520 C7orf72A4D263 438 aa4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 KCNH1O95259 989 aa4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 MC3RP41968 323 aa4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 CACNB2Q08289 660 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SCRN1Q12765 414 aa4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 SKOR2Q2VWA4 1001 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 DBX2Q6ZNG2 339 aa4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 PRRT2Q7Z6L0 340 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 ZNF513Q8N8E2 541 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.2-201ENST00000516520 COPS5Q92905 334 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms