RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 CXCL17Q6UXB2 119 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 TMEM192Q8IY95 271 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 EFHBQ8N7U6 833 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 PCSK9Q8NBP7 692 aaKnown RBP3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 FEZF2Q8TBJ5 459 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 NETO1Q8TDF5 533 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 KCNG4Q8TDN1 519 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 ZNF594Q96JF6 807 aaPredicted RBP3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 RPGRIP1Q96KN7 1286 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 RTP3Q9BQQ7 232 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 SEZ6LQ9BYH1 1024 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 OSBPL7Q9BZF2 842 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 SPATC1LQ9H0A9 340 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 FZD8Q9H461 694 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 INCENPQ9NQS7 918 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 TRMT13Q9NUP7 481 aaKnown RBP3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 TMOD2Q9NZR1 351 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 ZBTB47Q9UFB7 747 aaPredicted RBP3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 CDH22Q9UJ99 828 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 CDV3Q9UKY7 258 aaKnown RBP3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 IQSEC3Q9UPP2 1182 aaPredicted RBP3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 KIF26AQ9ULI4 1882 aaPredicted RBP3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 CACNA1DQ01668 2161 aa3.04□□□□□ -1.92
RNU1-48P-201ENST00000516400 CREBBPQ92793 2442 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 MTCL1Q9Y4B5 1905 aaKnown RBP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 URB1O60287 2271 aaKnown RBP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 NEURL1BA8MQ27 555 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 USP17L15C9J2P7 530 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 USP17L10C9JJH3 530 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 USP17L13C9JLJ4 530 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 USP17L11C9JVI0 530 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 USP17L18D6R9N7 530 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 USP17L22D6RA61 530 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 USP17L17D6RBQ6 530 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 USP17L19D6RCP7 530 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 USP17L20D6RJB6 530 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 KCNK5O95279 499 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 PGK2P07205 417 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 HOXB7P09629 217 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 NCLP19338 710 aaKnown RBP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 SPINK2P20155 84 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 GUCY1A2P33402 732 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 LIMK1P53667 647 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 PSMC6P62333 389 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 CCNA1P78396 465 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 BEX3Q00994 111 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 RBL2Q08999 1139 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 USP17L24Q0WX57 530 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 GCKRQ14397 625 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 PTPROQ16827 1216 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 CWF19L2Q2TBE0 894 aaKnown RBP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 KRTAP21-3Q3LHN1 58 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 CCDC144BQ3MJ40 725 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 GNASQ5JWF2 1037 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 FAM117BQ6P1L5 589 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 PCSK4Q6UW60 755 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 FBXO11Q86XK2 927 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 PROSER1Q86XN7 944 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 SIAH1Q8IUQ4 282 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 C1orf210Q8IVY1 113 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 ZNF843Q8N446 348 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 REPS2Q8NFH8 660 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 RIN2Q8WYP3 895 aaPredicted RBP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 DHX38Q92620 1227 aaKnown RBP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 CLP1Q92989 425 aaKnown RBP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 TOP1MTQ969P6 601 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 KAZALD1Q96I82 304 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 SAMD11Q96NU1 681 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 MPHOSPH8Q99549 860 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 SLC4A5Q9BY07 1137 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 PUS3Q9BZE2 481 aaKnown RBP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 LMAN2LQ9H0V9 348 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 ERVK-5Q9HDB9 667 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 HYPKQ9NX55 129 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 KCNK4Q9NYG8 393 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 BARX2Q9UMQ3 279 aaPredicted RBP3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 INSL6Q9Y581 213 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 PTPRQQ9UMZ3 2332 aa3.03□□□□□ -1.92
RNU1-48P-201ENST00000516400 SDK1Q7Z5N4 2213 aa3.03□□□□□ -1.93
RNU1-48P-201ENST00000516400 NOTCH2Q04721 2471 aa3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 HIVEP1P15822 2718 aa3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 IL16Q14005 1332 aa3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 MYH8P13535 1937 aa3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 GREB1LQ9C091 1923 aaPredicted RBP3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 GPR75-ASB3A0A0A6YYF3 556 aa3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 ABHD14A-ACY1A0A1B0GW23 586 aa3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 SHISA7A6NL88 538 aa3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 C2CD4DB7Z1M9 353 aa3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 TK2O00142 265 aa3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 MAFO75444 373 aaPredicted RBP3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 MMP1P03956 469 aa3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 ASGR2P07307 311 aa3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 C6orf222P0C671 652 aaPredicted RBP3.02□□□□□ -1.93
RNU1-48P-201ENST00000516400 ACTN1P12814 892 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms