RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 ZNF609O15014 1411 aa9.71□□□□□ -0.86
SFXN1-211ENST00000515736 TLR3O15455 904 aaKnown RBP9.7□□□□□ -0.86
SFXN1-211ENST00000515736 GIPRP48546 466 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 GPLD1P80108 840 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 KRT32Q14532 448 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 ANKRD1Q15327 319 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 CWC27Q6UX04 472 aaKnown RBP9.7□□□□□ -0.86
SFXN1-211ENST00000515736 FAM169BQ8N8A8 192 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 TRPM4Q8TD43 1214 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 GATAD2BQ8WXI9 593 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 PBX4Q9BYU1 374 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 ALDH8A1Q9H2A2 487 aaPredicted RBP9.7□□□□□ -0.86
SFXN1-211ENST00000515736 RASSF4Q9H2L5 321 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 SH2B1Q9NRF2 756 aaPredicted RBP9.7□□□□□ -0.86
SFXN1-211ENST00000515736 TMEM39AQ9NV64 488 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 MSRB2Q9Y3D2 182 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.7□□□□□ -0.86
SFXN1-211ENST00000515736 PCDHB5Q9Y5E4 795 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 MAP3K15Q6ZN16 1313 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 FER1L6Q2WGJ9 1857 aa9.7□□□□□ -0.86
SFXN1-211ENST00000515736 FAM221AA4D161 298 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 FAM187AA6NFU0 413 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 GLTPD2A6NH11 291 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 ZBTB42B2RXF5 422 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 EYA2O00167 538 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 VEGFAP15692 232 aaPredicted RBP9.69□□□□□ -0.86
SFXN1-211ENST00000515736 PDE6BP35913 854 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 IL6STP40189 918 aaPredicted RBP9.69□□□□□ -0.86
SFXN1-211ENST00000515736 EIF6P56537 245 aaKnown RBP9.69□□□□□ -0.86
SFXN1-211ENST00000515736 MPP2Q14168 576 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 EPHA10Q5JZY3 1008 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 VPS53Q5VIR6 699 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 TBC1D9BQ66K14 1250 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 LMBR1LQ6UX01 489 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 ZBTB38Q8NAP3 1195 aaPredicted RBP9.69□□□□□ -0.86
SFXN1-211ENST00000515736 SH3TC1Q8TE82 1336 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 MAP4K1Q92918 833 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 HAUS7Q99871 368 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 FSD1Q9BTV5 496 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 CCDC113Q9H0I3 377 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 MUC3BQ9H195 1237 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 MIR1-1HGQ9H1L0 117 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 SNX14Q9Y5W7 946 aa9.69□□□□□ -0.86
SFXN1-211ENST00000515736 LAMA4Q16363 1823 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 RPAP1Q9BWH6 1393 aaPredicted RBP9.68□□□□□ -0.86
SFXN1-211ENST00000515736 SLC35F4A4IF30 521 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 BAG4O95429 457 aaKnown RBP9.68□□□□□ -0.86
SFXN1-211ENST00000515736 A1BGP04217 495 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 CD33P20138 364 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 BMP6P22004 513 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 PRELPP51888 382 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 EIF5P55010 431 aaKnown RBP9.68□□□□□ -0.86
SFXN1-211ENST00000515736 NECTIN1Q15223 517 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 DBN1Q16643 649 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 KLHL40Q2TBA0 621 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 PLEKHG4Q58EX7 1191 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 RNF187Q5TA31 235 aaPredicted RBP9.68□□□□□ -0.86
SFXN1-211ENST00000515736 RASIP1Q5U651 963 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 TTLL7Q6ZT98 887 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 CELF2-AS1Q8N7Q2 184 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 CHMP4CQ96CF2 233 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 ABHD17AQ96GS6 310 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 TTC14Q96N46 770 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 BRINP2Q9C0B6 783 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 SIL1Q9H173 461 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 DBNLQ9UJU6 430 aaKnown RBP9.68□□□□□ -0.86
SFXN1-211ENST00000515736 PALD1Q9ULE6 856 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 LIMCH1Q9UPQ0 1083 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 ATP6V1DQ9Y5K8 247 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 CYP46A1Q9Y6A2 500 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 SLX4Q8IY92 1834 aa9.68□□□□□ -0.86
SFXN1-211ENST00000515736 WDR33Q9C0J8 1336 aaKnown RBP9.67□□□□□ -0.86
SFXN1-211ENST00000515736 CCDC85CA6NKD9 419 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 J3QW42 95 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 MAN1A2O60476 641 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 CSF1RP07333 972 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 ZNF157P51786 506 aaPredicted RBP9.67□□□□□ -0.86
SFXN1-211ENST00000515736 ST5P78524 1137 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 ATP11AP98196 1134 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 PPP2R3AQ06190 1150 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 TFCP2Q12800 502 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 CCDC57Q2TAC2 916 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 CNBD1Q8NA66 436 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 KBTBD3Q8NAB2 608 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 JARID2Q92833 1246 aaPredicted RBP9.67□□□□□ -0.86
SFXN1-211ENST00000515736 PLD4Q96BZ4 506 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 CCDC8Q9H0W5 538 aaPredicted RBP9.67□□□□□ -0.86
SFXN1-211ENST00000515736 SAMM50Q9Y512 469 aa9.67□□□□□ -0.86
SFXN1-211ENST00000515736 DDX60Q8IY21 1712 aaKnown RBP9.66□□□□□ -0.86
SFXN1-211ENST00000515736 hCG_2014768A0A024R1R8 64 aa9.66□□□□□ -0.86
SFXN1-211ENST00000515736 FSD2A1L4K1 749 aa9.66□□□□□ -0.86
SFXN1-211ENST00000515736 GOLGA6L3A6NEY3 463 aa9.66□□□□□ -0.86
SFXN1-211ENST00000515736 CILPO75339 1184 aa9.66□□□□□ -0.86
SFXN1-211ENST00000515736 MAP4K4O95819 1239 aaPredicted RBP9.66□□□□□ -0.86
SFXN1-211ENST00000515736 MBD3O95983 291 aa9.66□□□□□ -0.86
SFXN1-211ENST00000515736 ZFYP08048 801 aaPredicted RBP9.66□□□□□ -0.86
SFXN1-211ENST00000515736 KCNJ4P48050 445 aa9.66□□□□□ -0.86
SFXN1-211ENST00000515736 ZNF165P49910 485 aa9.66□□□□□ -0.86
SFXN1-211ENST00000515736 MRE11P49959 708 aa9.66□□□□□ -0.86
SFXN1-211ENST00000515736 IGBP1P78318 339 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms