RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 RGS22Q8NE09 1264 aa17.38■□□□□ 0.37
PDCD6-211ENST00000515587 CLEC4DQ8WXI8 215 aa17.38■□□□□ 0.37
PDCD6-211ENST00000515587 A1CFQ9NQ94 594 aaKnown RBP17.38■□□□□ 0.37
PDCD6-211ENST00000515587 GJD2Q9UKL4 321 aa17.38■□□□□ 0.37
PDCD6-211ENST00000515587 GABRQQ9UN88 632 aa17.38■□□□□ 0.37
PDCD6-211ENST00000515587 PTCH2Q9Y6C5 1203 aa17.38■□□□□ 0.37
PDCD6-211ENST00000515587 PTPDC1A2A3K4 754 aa17.37■□□□□ 0.37
PDCD6-211ENST00000515587 NFIBO00712 420 aa17.37■□□□□ 0.37
PDCD6-211ENST00000515587 DEXIO95424 95 aa17.37■□□□□ 0.37
PDCD6-211ENST00000515587 NAPAP54920 295 aa17.37■□□□□ 0.37
PDCD6-211ENST00000515587 IRF5Q13568 498 aa17.37■□□□□ 0.37
PDCD6-211ENST00000515587 PPP1R18Q6NYC8 613 aa17.37■□□□□ 0.37
PDCD6-211ENST00000515587 TRMT44Q8IYL2 757 aaKnown RBP17.37■□□□□ 0.37
PDCD6-211ENST00000515587 SAMD3Q8N6K7 520 aa17.37■□□□□ 0.37
PDCD6-211ENST00000515587 CCDC12Q8WUD4 166 aaPredicted RBP17.37■□□□□ 0.37
PDCD6-211ENST00000515587 WASF1Q92558 559 aa17.37■□□□□ 0.37
PDCD6-211ENST00000515587 GPKOWQ92917 476 aaPredicted RBP eCLIP17.37■□□□□ 0.37
PDCD6-211ENST00000515587 APBA2Q99767 749 aa17.37■□□□□ 0.37
PDCD6-211ENST00000515587 CYP39A1Q9NYL5 469 aa17.37■□□□□ 0.37
PDCD6-211ENST00000515587 POTEB2H3BUK9 544 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 PPFIA3O75145 1194 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 CD2BP2O95400 341 aaKnown RBP17.36■□□□□ 0.37
PDCD6-211ENST00000515587 PGK2P07205 417 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 XRCC5P13010 732 aaKnown RBP17.36■□□□□ 0.37
PDCD6-211ENST00000515587 CYP2B6P20813 491 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 SLC9C1Q4G0N8 1177 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 WWC2Q6AWC2 1192 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 USP6NLQ92738 828 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 CUL5Q93034 780 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 TMX3Q96JJ7 454 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 LLPHQ9BRT6 129 aaKnown RBP17.36■□□□□ 0.37
PDCD6-211ENST00000515587 PRO3102Q9H379 93 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 BARHL2Q9NY43 387 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 MAP3K20Q9NYL2 800 aaKnown RBP17.36■□□□□ 0.37
PDCD6-211ENST00000515587 STK36Q9NRP7 1315 aa17.36■□□□□ 0.37
PDCD6-211ENST00000515587 ADCY3O60266 1144 aa17.35■□□□□ 0.37
PDCD6-211ENST00000515587 CFBP00751 764 aa17.35■□□□□ 0.37
PDCD6-211ENST00000515587 HOXC6P09630 235 aa17.35■□□□□ 0.37
PDCD6-211ENST00000515587 CALML3P27482 149 aa17.35■□□□□ 0.37
PDCD6-211ENST00000515587 MNX1P50219 401 aaPredicted RBP17.35■□□□□ 0.37
PDCD6-211ENST00000515587 BAATQ14032 418 aaPredicted RBP17.35■□□□□ 0.37
PDCD6-211ENST00000515587 CCDC148Q8NFR7 591 aa17.35■□□□□ 0.37
PDCD6-211ENST00000515587 DPF3Q92784 378 aa17.35■□□□□ 0.37
PDCD6-211ENST00000515587 GLT8D2Q9H1C3 349 aa17.35■□□□□ 0.37
PDCD6-211ENST00000515587 ORC3Q9UBD5 711 aaPredicted RBP17.35■□□□□ 0.37
PDCD6-211ENST00000515587 DIS3Q9Y2L1 958 aaKnown RBP17.35■□□□□ 0.37
PDCD6-211ENST00000515587 DNAJC25-GNG10A0A024R161 153 aa17.34■□□□□ 0.37
PDCD6-211ENST00000515587 GCOM1H8Y6P7 765 aaPredicted RBP17.34■□□□□ 0.37
PDCD6-211ENST00000515587 STXBP3O00186 592 aa17.34■□□□□ 0.37
PDCD6-211ENST00000515587 SOX1O00570 391 aaPredicted RBP17.34■□□□□ 0.37
PDCD6-211ENST00000515587 CTDNEP1O95476 244 aa17.34■□□□□ 0.37
PDCD6-211ENST00000515587 POLR2MP0CAP2 368 aa17.34■□□□□ 0.37
PDCD6-211ENST00000515587 XBP1P17861 261 aa17.34■□□□□ 0.37
PDCD6-211ENST00000515587 MRPL12P52815 198 aaKnown RBP17.34■□□□□ 0.37
PDCD6-211ENST00000515587 RPS6P62753 249 aaKnown RBP17.34■□□□□ 0.37
PDCD6-211ENST00000515587 PKN1Q16512 942 aa17.34■□□□□ 0.37
PDCD6-211ENST00000515587 HSCBQ8IWL3 235 aa17.34■□□□□ 0.37
PDCD6-211ENST00000515587 SLAIN1Q8ND83 568 aa17.34■□□□□ 0.37
PDCD6-211ENST00000515587 NSUN7Q8NE18 718 aaKnown RBP17.34■□□□□ 0.37
PDCD6-211ENST00000515587 MPHOSPH6Q99547 160 aaKnown RBP17.34■□□□□ 0.37
PDCD6-211ENST00000515587 PSTPIP2Q9H939 334 aa17.34■□□□□ 0.37
PDCD6-211ENST00000515587 SH3GLB2Q9NR46 395 aa17.34■□□□□ 0.37
PDCD6-211ENST00000515587 ADD3Q9UEY8 706 aaKnown RBP17.34■□□□□ 0.37
PDCD6-211ENST00000515587 B4DLN1 442 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 COBLO75128 1261 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 GRK4P32298 578 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 ADCY7P51828 1080 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 HMGN5P82970 282 aaKnown RBP17.33■□□□□ 0.36
PDCD6-211ENST00000515587 ZNF792Q3KQV3 632 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 SLC30A10Q6XR72 485 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 TEX2Q8IWB9 1127 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 FAM177A1Q8N128 213 aaPredicted RBP17.33■□□□□ 0.36
PDCD6-211ENST00000515587 SMARCC2Q8TAQ2 1214 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 PXYLP1Q8TE99 480 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 SNX21Q969T3 373 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 C6orf50Q9HD87 102 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 BIN2Q9UBW5 565 aaPredicted RBP17.33■□□□□ 0.36
PDCD6-211ENST00000515587 LCTP09848 1927 aa17.33■□□□□ 0.36
PDCD6-211ENST00000515587 SMCO2A6NFE2 343 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 OPLAHO14841 1288 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 HSD17B4P51659 736 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 CNTN2Q02246 1040 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 ST3GAL1Q11201 340 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 OLFML2BQ68BL8 750 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 ZNF467Q7Z7K2 595 aaPredicted RBP17.32■□□□□ 0.36
PDCD6-211ENST00000515587 FAM133AQ8N9E0 248 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 FAM184AQ8NB25 1140 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 NPLOC4Q8TAT6 608 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 SH3TC2Q8TF17 1288 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 LRCH3Q96II8 777 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 MAML3Q96JK9 1138 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 KIF3AQ9Y496 699 aa17.32■□□□□ 0.36
PDCD6-211ENST00000515587 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.32■□□□□ 0.36
PDCD6-211ENST00000515587 K7ELQ4 463 aaPredicted RBP17.31■□□□□ 0.36
PDCD6-211ENST00000515587 JAK2O60674 1132 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 ELNP15502 786 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 GNA11P29992 359 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 GHRHRQ02643 423 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 TRIM29Q14134 588 aa17.31■□□□□ 0.36
PDCD6-211ENST00000515587 MFSD14CQ5VZR4 134 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms