RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 RAVER2Q9HCJ3 691 aaKnown RBP10.39□□□□□ -0.75
CPNE4-213ENST00000515418 ZNF536O15090 1300 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 IQCA1LA6NCM1 817 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 TRAF5O00463 557 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 BIN1O00499 593 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 TECP42680 631 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 TXKP42681 527 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 PNOCQ13519 176 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 ARL6IP4Q66PJ3 421 aaKnown RBP10.39□□□□□ -0.75
CPNE4-213ENST00000515418 SASS6Q6UVJ0 657 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 KRBA2Q6ZNG9 492 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 CNNM3Q8NE01 707 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 DHX58Q96C10 678 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 ATG4CQ96DT6 458 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 ANO3Q9BYT9 981 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 RRAGCQ9HB90 399 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 HOMER2Q9NSB8 354 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 CCPG1Q9ULG6 757 aa10.39□□□□□ -0.75
CPNE4-213ENST00000515418 MORC2Q9Y6X9 1032 aaPredicted RBP10.39□□□□□ -0.75
CPNE4-213ENST00000515418 SCN4AP35499 1836 aa10.38□□□□□ -0.75
CPNE4-213ENST00000515418 C19orf81C9J6K1 198 aa10.38□□□□□ -0.75
CPNE4-213ENST00000515418 CTAGE5O15320 804 aa10.38□□□□□ -0.75
CPNE4-213ENST00000515418 ZRSR1Q15695 479 aaKnown RBP10.38□□□□□ -0.75
CPNE4-213ENST00000515418 ZFP91Q96JP5 570 aaPredicted RBP10.38□□□□□ -0.75
CPNE4-213ENST00000515418 TIGD1Q96MW7 591 aa10.38□□□□□ -0.75
CPNE4-213ENST00000515418 PLIN2Q99541 437 aa10.38□□□□□ -0.75
CPNE4-213ENST00000515418 GLT8D2Q9H1C3 349 aa10.38□□□□□ -0.75
CPNE4-213ENST00000515418 SLC38A10Q9HBR0 1119 aa10.38□□□□□ -0.75
CPNE4-213ENST00000515418 KIAA1468Q9P260 1216 aa10.38□□□□□ -0.75
CPNE4-213ENST00000515418 PPP1R9AQ9ULJ8 1098 aa10.38□□□□□ -0.75
CPNE4-213ENST00000515418 CSADQ9Y600 493 aa10.38□□□□□ -0.75
CPNE4-213ENST00000515418 ZC3H4Q9UPT8 1303 aaKnown RBP10.38□□□□□ -0.75
CPNE4-213ENST00000515418 SPDYE3A6NKU9 549 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 IRF6O14896 467 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 PEX10O60683 326 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 ICAM1P05362 532 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 OR52Z1P0C646 297 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 ALAS1P13196 640 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 IREB2P48200 963 aaKnown RBP10.37□□□□□ -0.75
CPNE4-213ENST00000515418 UBXN2AP68543 259 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 MDM2Q00987 491 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-213ENST00000515418 CALCRLQ16602 461 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 ANO6Q4KMQ2 910 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 PNMA8AQ86V59 439 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-213ENST00000515418 STAMQ92783 540 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 OTUD5Q96G74 571 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 MTMR9Q96QG7 549 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 DNAJC25Q9H1X3 360 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 ZNF408Q9H9D4 720 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 DDX25Q9UHL0 483 aaKnown RBP10.37□□□□□ -0.75
CPNE4-213ENST00000515418 RLFQ13129 1914 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 GCOM1H8Y6P7 765 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-213ENST00000515418 VWA5AO00534 786 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 NFIBO00712 420 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 ACTN4O43707 911 aaKnown RBP10.37□□□□□ -0.75
CPNE4-213ENST00000515418 POLR2MP0CAP2 368 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 CASP1P29466 404 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 NF2P35240 595 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 LONP1P36776 959 aaKnown RBP10.37□□□□□ -0.75
CPNE4-213ENST00000515418 ARHGAP4P98171 946 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 KARSQ15046 597 aaKnown RBP10.37□□□□□ -0.75
CPNE4-213ENST00000515418 MUM1L1Q5H9M0 696 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 TREML2Q5T2D2 321 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 CATSPERGQ6ZRH7 1159 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 CYP2W1Q8TAV3 490 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 ZNF526Q8TF50 670 aaPredicted RBP10.37□□□□□ -0.75
CPNE4-213ENST00000515418 TMOD4Q9NZQ9 345 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 MRPL11Q9Y3B7 192 aaKnown RBP10.37□□□□□ -0.75
CPNE4-213ENST00000515418 RIPK3Q9Y572 518 aa10.37□□□□□ -0.75
CPNE4-213ENST00000515418 OTOFQ9HC10 1997 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 COL11A1P12107 1806 aaPredicted RBP10.36□□□□□ -0.75
CPNE4-213ENST00000515418 PIK3CDO00329 1044 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 LAD1O00515 517 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 ZBED4O75132 1171 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 PRPHP41219 470 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 AFMP43652 599 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 COG2Q14746 738 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 PPP4R3AQ6IN85 833 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 CRYGNQ8WXF5 182 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 CLEC4DQ8WXI8 215 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 HAS1Q92839 578 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 CTDP1Q9Y5B0 961 aaPredicted RBP10.36□□□□□ -0.75
CPNE4-213ENST00000515418 ABCB11O95342 1321 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 PARP14Q460N5 1801 aa10.36□□□□□ -0.75
CPNE4-213ENST00000515418 FAM86B1E9PN63 330 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 FOSP01100 380 aaPredicted RBP10.35□□□□□ -0.75
CPNE4-213ENST00000515418 FAM86B2P0C5J1 330 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 SLFN14P0C7P3 912 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 DSG3P32926 999 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 UBA7P41226 1012 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 USP11P51784 963 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 AP3B2Q13367 1082 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 PRR16Q569H4 304 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 C11orf57Q6ZUT1 292 aaPredicted RBP10.35□□□□□ -0.75
CPNE4-213ENST00000515418 LUZP1Q86V48 1076 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 ANKRD13AQ8IZ07 590 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 C12orf42Q96LP6 360 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 PCDHA5Q9Y5H7 936 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 PTPRFP10586 1907 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms