RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 CTU1Q7Z7A3 348 aaKnown RBP8.22□□□□□ -1.09
SMAD1-213ENST00000514778 LAPTM4BQ86VI4 370 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 MICU3Q86XE3 530 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 DDX12PQ92771 950 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 RRP36Q96EU6 259 aaKnown RBP8.22□□□□□ -1.09
SMAD1-213ENST00000514778 TRIM47Q96LD4 638 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 ZSCAN31Q96LW9 406 aaPredicted RBP8.22□□□□□ -1.09
SMAD1-213ENST00000514778 TCEANC2Q96MN5 208 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 AMNQ9BXJ7 453 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 LRRC2Q9BYS8 371 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 EFCC1Q9HA90 598 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 SRRDQ9UH36 339 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 HPS5Q9UPZ3 1129 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 MTMR7Q9Y216 660 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 DIS3Q9Y2L1 958 aaKnown RBP8.22□□□□□ -1.09
SMAD1-213ENST00000514778 IVNS1ABPQ9Y6Y0 642 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 RLFQ13129 1914 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 ABCB11O95342 1321 aa8.22□□□□□ -1.09
SMAD1-213ENST00000514778 GOLGA8AA7E2F4 631 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 CYTH3O43739 400 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 PFKFB2O60825 505 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 CDKL5O76039 1030 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 FCER1AP12319 257 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 IFNAR1P17181 557 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 ERCC3P19447 782 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 SLC16A2P36021 539 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 GHRHRQ02643 423 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 GRB14Q14449 540 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 PLS1Q14651 629 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 KCTD2Q14681 263 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 CDC37Q16543 378 aaPredicted RBP8.21□□□□□ -1.1
SMAD1-213ENST00000514778 MORN1Q5T089 497 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 SNRNP48Q6IEG0 339 aaKnown RBP8.21□□□□□ -1.1
SMAD1-213ENST00000514778 OTOP1Q7RTM1 612 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 GPR142Q7Z601 462 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 FBXO11Q86XK2 927 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 MCF2L2Q86YR7 1114 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 SRBD1Q8N5C6 995 aaKnown RBP8.21□□□□□ -1.1
SMAD1-213ENST00000514778 MSL3Q8N5Y2 521 aaKnown RBP8.21□□□□□ -1.1
SMAD1-213ENST00000514778 CD99L2Q8TCZ2 262 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 PXYLP1Q8TE99 480 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 USP6NLQ92738 828 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 NUDT12Q9BQG2 462 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 UBA5Q9GZZ9 404 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 ACAD9Q9H845 621 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 RAVER2Q9HCJ3 691 aaKnown RBP8.21□□□□□ -1.1
SMAD1-213ENST00000514778 SH2B1Q9NRF2 756 aaPredicted RBP8.21□□□□□ -1.1
SMAD1-213ENST00000514778 FAM217BQ9NTX9 383 aaPredicted RBP8.21□□□□□ -1.1
SMAD1-213ENST00000514778 SEC63Q9UGP8 760 aaKnown RBP8.21□□□□□ -1.1
SMAD1-213ENST00000514778 TSKSQ9UJT2 592 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 GJD2Q9UKL4 321 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 CCPG1Q9ULG6 757 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 LIMCH1Q9UPQ0 1083 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 MRPL11Q9Y3B7 192 aaKnown RBP8.21□□□□□ -1.1
SMAD1-213ENST00000514778 PARP14Q460N5 1801 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 PFASO15067 1338 aa8.21□□□□□ -1.1
SMAD1-213ENST00000514778 PRPF3O43395 683 aaKnown RBP8.2□□□□□ -1.1
SMAD1-213ENST00000514778 CAPN2P17655 700 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 RGS2P41220 211 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 AK2P54819 239 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 FUT2Q10981 343 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 MAP2K5Q13163 448 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 QRICH1Q2TAL8 776 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 MCTP2Q6DN12 878 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 FBXO46Q6PJ61 603 aaPredicted RBP8.2□□□□□ -1.1
SMAD1-213ENST00000514778 RASGRP2Q7LDG7 609 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 NCAPG2Q86XI2 1143 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 TRIM22Q8IYM9 498 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 CPXCR1Q8N123 301 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 AGBL1Q96MI9 1066 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 TRERF1Q96PN7 1200 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 MYL10Q9BUA6 226 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 RNF26Q9BY78 433 aaPredicted RBP8.2□□□□□ -1.1
SMAD1-213ENST00000514778 GLT8D2Q9H1C3 349 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 PORCNQ9H237 461 aa8.2□□□□□ -1.1
SMAD1-213ENST00000514778 SLKQ9H2G2 1235 aaPredicted RBP8.2□□□□□ -1.1
SMAD1-213ENST00000514778 CWC22Q9HCG8 908 aaKnown RBP8.2□□□□□ -1.1
SMAD1-213ENST00000514778 ZNF236Q9UL36 1845 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 DNAJC25-GNG10A0A024R161 153 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 B4DLN1 442 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 CPLX1O14810 134 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 PLEKHA8P1O95397 391 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 CTGFP29279 349 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 CDC27P30260 824 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 ADD1P35611 737 aaKnown RBP8.19□□□□□ -1.1
SMAD1-213ENST00000514778 MRPL12P52815 198 aaKnown RBP8.19□□□□□ -1.1
SMAD1-213ENST00000514778 AKAP17AQ02040 695 aaKnown RBP8.19□□□□□ -1.1
SMAD1-213ENST00000514778 NBR1Q14596 966 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 NTRK3Q16288 839 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 IFFO2Q5TF58 517 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 PPP1R18Q6NYC8 613 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 CCDC174Q6PII3 467 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 NBPF11Q86T75 865 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 DPP9Q86TI2 863 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 ANKRD35Q8N283 1001 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 ANKK1Q8NFD2 765 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 CCDC12Q8WUD4 166 aaPredicted RBP8.19□□□□□ -1.1
SMAD1-213ENST00000514778 PIGSQ96S52 555 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 MMP19Q99542 508 aa8.19□□□□□ -1.1
SMAD1-213ENST00000514778 APBA2Q99767 749 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms