RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SOWAHBA6NEL2 793 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 SMCO2A6NFE2 343 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 CDKL5O76039 1030 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 ELNP15502 786 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 RPS6P62753 249 aaKnown RBP13.05□□□□□ -0.32
HTT-213ENST00000513806 UBXN2AP68543 259 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 TRIM32Q13049 653 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 CUL4AQ13619 759 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 KCTD2Q14681 263 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 RNF207Q6ZRF8 634 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 DPP9Q86TI2 863 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 FCHSD1Q86WN1 690 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 RASGRP4Q8TDF6 673 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 USP6NLQ92738 828 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 ZFP91Q96JP5 570 aaPredicted RBP13.05□□□□□ -0.32
HTT-213ENST00000513806 TAAR1Q96RJ0 339 aa13.05□□□□□ -0.32
HTT-213ENST00000513806 SLC15A5A6NIM6 579 aa13.04□□□□□ -0.32
HTT-213ENST00000513806 GJB2P29033 226 aa13.04□□□□□ -0.32
HTT-213ENST00000513806 COPB2P35606 906 aa13.04□□□□□ -0.32
HTT-213ENST00000513806 MAP2K5Q13163 448 aa13.04□□□□□ -0.32
HTT-213ENST00000513806 SYTL5Q8TDW5 730 aaPredicted RBP13.04□□□□□ -0.32
HTT-213ENST00000513806 NUDT12Q9BQG2 462 aa13.04□□□□□ -0.32
HTT-213ENST00000513806 BIN2Q9UBW5 565 aaPredicted RBP13.04□□□□□ -0.32
HTT-213ENST00000513806 FBXO40Q9UH90 709 aa13.04□□□□□ -0.32
HTT-213ENST00000513806 DNAJC25-GNG10A0A024R161 153 aa13.03□□□□□ -0.32
HTT-213ENST00000513806 POTEB2H3BUK9 544 aa13.03□□□□□ -0.32
HTT-213ENST00000513806 MEIS2O14770 477 aa13.03□□□□□ -0.32
HTT-213ENST00000513806 MYCP01106 439 aaPredicted RBP13.03□□□□□ -0.32
HTT-213ENST00000513806 ADCY7P51828 1080 aa13.03□□□□□ -0.32
HTT-213ENST00000513806 ZNF792Q3KQV3 632 aa13.03□□□□□ -0.32
HTT-213ENST00000513806 JAKMIP3Q5VZ66 844 aa13.03□□□□□ -0.32
HTT-213ENST00000513806 CTU1Q7Z7A3 348 aaKnown RBP13.03□□□□□ -0.32
HTT-213ENST00000513806 FAM133AQ8N9E0 248 aa13.03□□□□□ -0.32
HTT-213ENST00000513806 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
HTT-213ENST00000513806 LLPHQ9BRT6 129 aaKnown RBP13.03□□□□□ -0.32
HTT-213ENST00000513806 PSTPIP2Q9H939 334 aa13.03□□□□□ -0.32
HTT-213ENST00000513806 SMC3Q9UQE7 1217 aa13.03□□□□□ -0.32
HTT-213ENST00000513806 GCOM1H8Y6P7 765 aaPredicted RBP13.02□□□□□ -0.33
HTT-213ENST00000513806 STRNO43815 780 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 POLR2MP0CAP2 368 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 EIF2AK2P19525 551 aaKnown RBP13.02□□□□□ -0.33
HTT-213ENST00000513806 RGS2P41220 211 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 HSD17B4P51659 736 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 NLRP5P59047 1200 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 NPY5RQ15761 445 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 PRAMEF19Q5SWL8 479 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.02□□□□□ -0.33
HTT-213ENST00000513806 MCF2L2Q86YR7 1114 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 FAM184AQ8NB25 1140 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 IL31RAQ8NI17 732 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 RAET1EQ8TD07 263 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 SOCS4Q8WXH5 440 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 TRIB2Q92519 343 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 MAML3Q96JK9 1138 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 RIC8AQ9NPQ8 531 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 PTPN22Q9Y2R2 807 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 PFASO15067 1338 aa13.02□□□□□ -0.33
HTT-213ENST00000513806 FAM205CA6NFA0 338 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 ADCY3O60266 1144 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 HOXD10P28358 340 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 CYP2C19P33261 490 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 ALDH5A1P51649 535 aaPredicted RBP13.01□□□□□ -0.33
HTT-213ENST00000513806 KRT40Q6A162 431 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 EEPD1Q7L9B9 569 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 ABRAQ8N0Z2 381 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 CUL5Q93034 780 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 APBA2Q99767 749 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 PHF20Q9BVI0 1012 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 ZMYND12Q9H0C1 365 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 RBM27Q9P2N5 1060 aaKnown RBP13.01□□□□□ -0.33
HTT-213ENST00000513806 PNMA2Q9UL42 364 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 FRMPD3Q5JV73 1810 aa13.01□□□□□ -0.33
HTT-213ENST00000513806 hCG_1984214I3L0E3 225 aa13□□□□□ -0.33
HTT-213ENST00000513806 PTGS1P23219 599 aa13□□□□□ -0.33
HTT-213ENST00000513806 HMGN5P82970 282 aaKnown RBP13□□□□□ -0.33
HTT-213ENST00000513806 NR5A1Q13285 461 aa13□□□□□ -0.33
HTT-213ENST00000513806 EARS2Q5JPH6 523 aaKnown RBP13□□□□□ -0.33
HTT-213ENST00000513806 COL13A1Q5TAT6 717 aaPredicted RBP13□□□□□ -0.33
HTT-213ENST00000513806 ZNF713Q8N859 430 aaPredicted RBP13□□□□□ -0.33
HTT-213ENST00000513806 IL27Q8NEV9 243 aa13□□□□□ -0.33
HTT-213ENST00000513806 C8orf76Q96K31 380 aa13□□□□□ -0.33
HTT-213ENST00000513806 RMDN3Q96TC7 470 aa13□□□□□ -0.33
HTT-213ENST00000513806 MCOLN1Q9GZU1 580 aa13□□□□□ -0.33
HTT-213ENST00000513806 PXMP2Q9NR77 195 aa13□□□□□ -0.33
HTT-213ENST00000513806 PCDHA6Q9UN73 950 aa13□□□□□ -0.33
HTT-213ENST00000513806 ZSCAN21Q9Y5A6 473 aaPredicted RBP13□□□□□ -0.33
HTT-213ENST00000513806 PCDHA8Q9Y5H6 950 aa13□□□□□ -0.33
HTT-213ENST00000513806 MYH15Q9Y2K3 1946 aa13□□□□□ -0.33
HTT-213ENST00000513806 ESYT2A0FGR8 921 aa12.99□□□□□ -0.33
HTT-213ENST00000513806 KIF28PB7ZC32 967 aa12.99□□□□□ -0.33
HTT-213ENST00000513806 HOXC6P09630 235 aa12.99□□□□□ -0.33
HTT-213ENST00000513806 MYCLP12524 364 aaPredicted RBP12.99□□□□□ -0.33
HTT-213ENST00000513806 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
HTT-213ENST00000513806 MRPL12P52815 198 aaKnown RBP12.99□□□□□ -0.33
HTT-213ENST00000513806 GHRHRQ02643 423 aa12.99□□□□□ -0.33
HTT-213ENST00000513806 TRAF1Q13077 416 aa12.99□□□□□ -0.33
HTT-213ENST00000513806 TMEM63BQ5T3F8 832 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms