RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 NEUROD6Q96NK8 337 aa14.4□□□□□ -0.1
SFXN1-210ENST00000513725 SEMA4AQ9H3S1 761 aa14.4□□□□□ -0.1
SFXN1-210ENST00000513725 IGFLR1Q9H665 355 aa14.4□□□□□ -0.1
SFXN1-210ENST00000513725 GPHNQ9NQX3 736 aaPredicted RBP14.4□□□□□ -0.1
SFXN1-210ENST00000513725 ARID4AP29374 1257 aaPredicted RBP14.39□□□□□ -0.11
SFXN1-210ENST00000513725 SLC4A3P48751 1232 aa14.39□□□□□ -0.11
SFXN1-210ENST00000513725 DYNLL1P63167 89 aaKnown RBP14.39□□□□□ -0.11
SFXN1-210ENST00000513725 HTRA4P83105 476 aaPredicted RBP14.39□□□□□ -0.11
SFXN1-210ENST00000513725 EXOSC9Q06265 439 aaKnown RBP14.39□□□□□ -0.11
SFXN1-210ENST00000513725 NFRKBQ6P4R8 1299 aa14.39□□□□□ -0.11
SFXN1-210ENST00000513725 FBXO11Q86XK2 927 aa14.39□□□□□ -0.11
SFXN1-210ENST00000513725 TMEM192Q8IY95 271 aa14.39□□□□□ -0.11
SFXN1-210ENST00000513725 RPGRIP1Q96KN7 1286 aa14.39□□□□□ -0.11
SFXN1-210ENST00000513725 MTG1Q9BT17 334 aaPredicted RBP14.39□□□□□ -0.11
SFXN1-210ENST00000513725 PHF7Q9BWX1 381 aaPredicted RBP14.39□□□□□ -0.11
SFXN1-210ENST00000513725 LMAN2LQ9H0V9 348 aa14.39□□□□□ -0.11
SFXN1-210ENST00000513725 RIPK3Q9Y572 518 aa14.39□□□□□ -0.11
SFXN1-210ENST00000513725 MYO7AQ13402 2215 aa14.39□□□□□ -0.11
SFXN1-210ENST00000513725 CXCL10P02778 98 aa14.38□□□□□ -0.11
SFXN1-210ENST00000513725 MYL3P08590 195 aa14.38□□□□□ -0.11
SFXN1-210ENST00000513725 PTGS1P23219 599 aa14.38□□□□□ -0.11
SFXN1-210ENST00000513725 PLCD1P51178 756 aa14.38□□□□□ -0.11
SFXN1-210ENST00000513725 PURAQ00577 322 aaKnown RBP14.38□□□□□ -0.11
SFXN1-210ENST00000513725 PTPN11Q06124 597 aaPredicted RBP14.38□□□□□ -0.11
SFXN1-210ENST00000513725 GPNMBQ14956 572 aa14.38□□□□□ -0.11
SFXN1-210ENST00000513725 MSLNLQ96KJ4 702 aa14.38□□□□□ -0.11
SFXN1-210ENST00000513725 HINFPQ9BQA5 517 aa14.38□□□□□ -0.11
SFXN1-210ENST00000513725 FBXO40Q9UH90 709 aa14.38□□□□□ -0.11
SFXN1-210ENST00000513725 PA2G4Q9UQ80 394 aaKnown RBP14.38□□□□□ -0.11
SFXN1-210ENST00000513725 PCDHGC5Q9Y5F6 944 aa14.38□□□□□ -0.11
SFXN1-210ENST00000513725 SPTBN2O15020 2390 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 ASB14A6NK59 587 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 IGSF3O75054 1194 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 AMHP03971 560 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 POLR3DP05423 398 aaPredicted RBP14.37□□□□□ -0.11
SFXN1-210ENST00000513725 UQCRFS1P1P0C7P4 283 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 SELPP16109 830 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 CPT1AP50416 773 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 RRP1P56182 461 aaKnown RBP14.37□□□□□ -0.11
SFXN1-210ENST00000513725 ICA1Q05084 483 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 ADAM15Q13444 863 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 RSPO4Q2I0M5 234 aaPredicted RBP14.37□□□□□ -0.11
SFXN1-210ENST00000513725 KIAA0319Q5VV43 1072 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 ASTLQ6HA08 431 aaPredicted RBP14.37□□□□□ -0.11
SFXN1-210ENST00000513725 LRRC8DQ7L1W4 858 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.37□□□□□ -0.11
SFXN1-210ENST00000513725 SMRP1Q8NCR6 262 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 INCENPQ9NQS7 918 aa14.37□□□□□ -0.11
SFXN1-210ENST00000513725 SH2B1Q9NRF2 756 aaPredicted RBP14.37□□□□□ -0.11
SFXN1-210ENST00000513725 TRIP12Q14669 1992 aaPredicted RBP14.36□□□□□ -0.11
SFXN1-210ENST00000513725 FRYLO94915 3013 aa14.36□□□□□ -0.11
SFXN1-210ENST00000513725 LINC01565O15544 149 aa14.36□□□□□ -0.11
SFXN1-210ENST00000513725 SDHBP21912 280 aa14.36□□□□□ -0.11
SFXN1-210ENST00000513725 GABPAQ06546 454 aa14.36□□□□□ -0.11
SFXN1-210ENST00000513725 SIAH1Q8IUQ4 282 aa14.36□□□□□ -0.11
SFXN1-210ENST00000513725 YME1L1Q96TA2 773 aa14.36□□□□□ -0.11
SFXN1-210ENST00000513725 CTDP1Q9Y5B0 961 aaPredicted RBP14.36□□□□□ -0.11
SFXN1-210ENST00000513725 SETXQ7Z333 2677 aaKnown RBP14.35□□□□□ -0.11
SFXN1-210ENST00000513725 NBNO60934 754 aa14.35□□□□□ -0.11
SFXN1-210ENST00000513725 GTF2F1P35269 517 aaKnown RBP eCLIP14.35□□□□□ -0.11
SFXN1-210ENST00000513725 TFCP2Q12800 502 aa14.35□□□□□ -0.11
SFXN1-210ENST00000513725 COASYQ13057 564 aa14.35□□□□□ -0.11
SFXN1-210ENST00000513725 BRDTQ58F21 947 aaPredicted RBP14.35□□□□□ -0.11
SFXN1-210ENST00000513725 MYOCDQ8IZQ8 938 aa14.35□□□□□ -0.11
SFXN1-210ENST00000513725 CHST13Q8NET6 341 aa14.35□□□□□ -0.11
SFXN1-210ENST00000513725 PPP2R3CQ969Q6 453 aa14.35□□□□□ -0.11
SFXN1-210ENST00000513725 HAUS7Q99871 368 aa14.35□□□□□ -0.11
SFXN1-210ENST00000513725 SLF1Q9BQI6 1058 aa14.35□□□□□ -0.11
SFXN1-210ENST00000513725 GOPCQ9HD26 462 aa14.35□□□□□ -0.11
SFXN1-210ENST00000513725 COPRSQ9NQ92 184 aa14.35□□□□□ -0.11
SFXN1-210ENST00000513725 PDGFCQ9NRA1 345 aa14.35□□□□□ -0.11
SFXN1-210ENST00000513725 USP15Q9Y4E8 981 aaPredicted RBP14.35□□□□□ -0.11
SFXN1-210ENST00000513725 USP17L12C9JPN9 530 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 USP17L21D6R901 530 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 ATP2A1O14983 1001 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 RAD21O60216 631 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 CYP7A1P22680 504 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 CLCN5P51795 746 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 CNTN2Q02246 1040 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 PTGISQ16647 500 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 TCTN1Q2MV58 587 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 FAM83BQ5T0W9 1011 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 TAPT1Q6NXT6 567 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.34□□□□□ -0.116e-7■■■■□ 19.3
SFXN1-210ENST00000513725 CLEC10AQ8IUN9 316 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 UBALD2Q8IYN6 164 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 CPXCR1Q8N123 301 aa14.34□□□□□ -0.11
SFXN1-210ENST00000513725 NLRC5Q86WI3 1866 aa14.33□□□□□ -0.11
SFXN1-210ENST00000513725 GPR179Q6PRD1 2367 aa14.33□□□□□ -0.11
SFXN1-210ENST00000513725 ZBED4O75132 1171 aa14.33□□□□□ -0.12
SFXN1-210ENST00000513725 RB1P06400 928 aa14.33□□□□□ -0.12
SFXN1-210ENST00000513725 KIAA1211Q6ZU35 1233 aa14.33□□□□□ -0.12
SFXN1-210ENST00000513725 FAM133AQ8N9E0 248 aa14.33□□□□□ -0.12
SFXN1-210ENST00000513725 MIGA1Q8NAN2 632 aa14.33□□□□□ -0.12
SFXN1-210ENST00000513725 PPP1R13LQ8WUF5 828 aa14.33□□□□□ -0.12
SFXN1-210ENST00000513725 C11orf84Q9BUA3 381 aaPredicted RBP14.33□□□□□ -0.12
SFXN1-210ENST00000513725 MFSD1Q9H3U5 465 aa14.33□□□□□ -0.12
SFXN1-210ENST00000513725 SNRKQ9NRH2 765 aa14.33□□□□□ -0.12
SFXN1-210ENST00000513725 SCN10AQ9Y5Y9 1956 aa14.33□□□□□ -0.12
SFXN1-210ENST00000513725 RALGAPA2Q2PPJ7 1873 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms