RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 EEPD1Q7L9B9 569 aa20.6■□□□□ 0.89
DDR1-272ENST00000513243 MCF2L2Q86YR7 1114 aa20.6■□□□□ 0.89
DDR1-272ENST00000513243 RAB11FIP4Q86YS3 637 aa20.6■□□□□ 0.89
DDR1-272ENST00000513243 MAF1Q9H063 256 aa20.6■□□□□ 0.89
DDR1-272ENST00000513243 PDGFCQ9NRA1 345 aa20.6■□□□□ 0.89
DDR1-272ENST00000513243 SYNRGQ9UMZ2 1314 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 ALPK3Q96L96 1907 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 PNMA6FA0A0J9YX94 578 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.59■□□□□ 0.89
DDR1-272ENST00000513243 OPLAHO14841 1288 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 HMGB1P09429 215 aaKnown RBP20.59■□□□□ 0.89
DDR1-272ENST00000513243 CALM1P0DP23 149 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 CALM2P0DP24 149 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 CALM3P0DP25 149 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 CPA1P15085 419 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 ADCYAP1R1P41586 468 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 TAPT1Q6NXT6 567 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 RNF180Q86T96 592 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 FBXO16Q8IX29 292 aaPredicted RBP20.59■□□□□ 0.89
DDR1-272ENST00000513243 DNERQ8NFT8 737 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 SYTL5Q8TDW5 730 aaPredicted RBP20.59■□□□□ 0.89
DDR1-272ENST00000513243 PIBF1Q8WXW3 757 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 SPZ1Q9BXG8 430 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 COL20A1Q9P218 1284 aa20.59■□□□□ 0.89
DDR1-272ENST00000513243 BAZ2BQ9UIF8 2168 aaKnown RBP20.58■□□□□ 0.89
DDR1-272ENST00000513243 PLEKHA8P1O95397 391 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 SMARCA1P28370 1054 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 GNAQP50148 359 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 IRX5P78411 483 aaPredicted RBP20.58■□□□□ 0.89
DDR1-272ENST00000513243 TNFAIP2Q03169 654 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 C7orf61Q8IZ16 206 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 SRBD1Q8N5C6 995 aaKnown RBP20.58■□□□□ 0.89
DDR1-272ENST00000513243 FANCBQ8NB91 859 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 KLHDC9Q8NEP7 349 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 JAKMIP1Q96N16 626 aaKnown RBP20.58■□□□□ 0.89
DDR1-272ENST00000513243 TAAR1Q96RJ0 339 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 LZTS2Q9BRK4 669 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 VTA1Q9NP79 307 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 BRPF3Q9ULD4 1205 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 PHF24Q9UPV7 400 aa20.58■□□□□ 0.89
DDR1-272ENST00000513243 MYH6P13533 1939 aa20.58■□□□□ 0.88
DDR1-272ENST00000513243 MYADML2A6NDP7 307 aa20.57■□□□□ 0.88
DDR1-272ENST00000513243 EPB41L2O43491 1005 aaKnown RBP20.57■□□□□ 0.88
DDR1-272ENST00000513243 CFBP00751 764 aa20.57■□□□□ 0.88
DDR1-272ENST00000513243 EDNRBP24530 442 aa20.57■□□□□ 0.88
DDR1-272ENST00000513243 ATN1P54259 1190 aaPredicted RBP20.57■□□□□ 0.88
DDR1-272ENST00000513243 APOA5Q6Q788 366 aa20.57■□□□□ 0.88
DDR1-272ENST00000513243 MICU3Q86XE3 530 aa20.57■□□□□ 0.88
DDR1-272ENST00000513243 CMTR1Q8N1G2 835 aaKnown RBP20.57■□□□□ 0.88
DDR1-272ENST00000513243 FERMT2Q96AC1 680 aa20.57■□□□□ 0.88
DDR1-272ENST00000513243 USP26Q9BXU7 913 aa20.57■□□□□ 0.88
DDR1-272ENST00000513243 UPF3AQ9H1J1 476 aaKnown RBP20.57■□□□□ 0.88
DDR1-272ENST00000513243 LRRC37A2A6NM11 1700 aa20.56■□□□□ 0.88
DDR1-272ENST00000513243 SMPD1P17405 629 aa20.56■□□□□ 0.88
DDR1-272ENST00000513243 HSD17B4P51659 736 aa20.56■□□□□ 0.88
DDR1-272ENST00000513243 GHRHRQ02643 423 aa20.56■□□□□ 0.88
DDR1-272ENST00000513243 PDE4DQ08499 809 aa20.56■□□□□ 0.88
DDR1-272ENST00000513243 TRAF1Q13077 416 aa20.56■□□□□ 0.88
DDR1-272ENST00000513243 TMEM63BQ5T3F8 832 aa20.56■□□□□ 0.88
DDR1-272ENST00000513243 IQSEC1Q6DN90 963 aa20.56■□□□□ 0.88
DDR1-272ENST00000513243 CCSAPQ6IQ19 270 aaPredicted RBP20.56■□□□□ 0.88
DDR1-272ENST00000513243 SYNE3Q6ZMZ3 975 aa20.56■□□□□ 0.88
DDR1-272ENST00000513243 NOL8Q76FK4 1167 aaKnown RBP20.56■□□□□ 0.88
DDR1-272ENST00000513243 RRP36Q96EU6 259 aaKnown RBP20.56■□□□□ 0.88
DDR1-272ENST00000513243 GNEQ9Y223 722 aaKnown RBP20.56■□□□□ 0.88
DDR1-272ENST00000513243 C6orf222P0C671 652 aaPredicted RBP20.55■□□□□ 0.88
DDR1-272ENST00000513243 PTGS1P23219 599 aa20.55■□□□□ 0.88
DDR1-272ENST00000513243 GJA9P57773 515 aa20.55■□□□□ 0.88
DDR1-272ENST00000513243 BLOC1S2Q6QNY1 142 aa20.55■□□□□ 0.88
DDR1-272ENST00000513243 SLC39A5Q6ZMH5 540 aa20.55■□□□□ 0.88
DDR1-272ENST00000513243 NSUN6Q8TEA1 469 aaKnown RBP20.55■□□□□ 0.88
DDR1-272ENST00000513243 MPHOSPH6Q99547 160 aaKnown RBP20.55■□□□□ 0.88
DDR1-272ENST00000513243 TSEN34Q9BSV6 310 aaKnown RBP20.55■□□□□ 0.88
DDR1-272ENST00000513243 B4DLN1 442 aa20.54■□□□□ 0.88
DDR1-272ENST00000513243 CTAGE5O15320 804 aa20.54■□□□□ 0.88
DDR1-272ENST00000513243 CST5P28325 142 aaPredicted RBP20.54■□□□□ 0.88
DDR1-272ENST00000513243 MRPL12P52815 198 aaKnown RBP20.54■□□□□ 0.88
DDR1-272ENST00000513243 ACLYP53396 1101 aa20.54■□□□□ 0.88
DDR1-272ENST00000513243 NKX3-2P78367 333 aa20.54■□□□□ 0.88
DDR1-272ENST00000513243 KCNA10Q16322 511 aa20.54■□□□□ 0.88
DDR1-272ENST00000513243 TMTC3Q6ZXV5 915 aa20.54■□□□□ 0.88
DDR1-272ENST00000513243 CCDC82Q8N4S0 544 aa20.54■□□□□ 0.88
DDR1-272ENST00000513243 RMDN3Q96TC7 470 aa20.54■□□□□ 0.88
DDR1-272ENST00000513243 SPC25Q9HBM1 224 aa20.54■□□□□ 0.88
DDR1-272ENST00000513243 KLF18A0A0U1RQI7 1052 aa20.53■□□□□ 0.88
DDR1-272ENST00000513243 RBM47A0AV96 593 aaKnown RBP20.53■□□□□ 0.88
DDR1-272ENST00000513243 ZBTB43O43298 467 aa20.53■□□□□ 0.88
DDR1-272ENST00000513243 RPS6KB1P23443 525 aa20.53■□□□□ 0.88
DDR1-272ENST00000513243 HOXA13P31271 388 aaPredicted RBP20.53■□□□□ 0.88
DDR1-272ENST00000513243 FGD1P98174 961 aa20.53■□□□□ 0.88
DDR1-272ENST00000513243 GNASQ5JWF2 1037 aa20.53■□□□□ 0.88
DDR1-272ENST00000513243 Q6ZUG5 572 aa20.53■□□□□ 0.88
DDR1-272ENST00000513243 SAMD3Q8N6K7 520 aa20.53■□□□□ 0.88
DDR1-272ENST00000513243 WDR11Q9BZH6 1224 aa20.53■□□□□ 0.88
DDR1-272ENST00000513243 MAP3K20Q9NYL2 800 aaKnown RBP20.53■□□□□ 0.88
DDR1-272ENST00000513243 ZMYND8Q9ULU4 1186 aaPredicted RBP20.53■□□□□ 0.88
DDR1-272ENST00000513243 CEP290O15078 2479 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 A0A1W2PQ45 241 aaPredicted RBP20.52■□□□□ 0.88
DDR1-272ENST00000513243 A0A1W2PQY0 241 aa20.52■□□□□ 0.88
DDR1-272ENST00000513243 MOXD2PA6NHM9 499 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms