RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 PDZRN4Q6ZMN7 1036 aaPredicted RBP19■□□□□ 0.63
HMGCL-209ENST00000513148 ABRAQ8N0Z2 381 aa19■□□□□ 0.63
HMGCL-209ENST00000513148 APBA2Q99767 749 aa19■□□□□ 0.63
HMGCL-209ENST00000513148 IFNAR1P17181 557 aa18.99■□□□□ 0.63
HMGCL-209ENST00000513148 PKN2Q16513 984 aaKnown RBP18.99■□□□□ 0.63
HMGCL-209ENST00000513148 CCL14Q16627 93 aa18.99■□□□□ 0.63
HMGCL-209ENST00000513148 NPLOC4Q8TAT6 608 aa18.99■□□□□ 0.63
HMGCL-209ENST00000513148 USP6NLQ92738 828 aa18.99■□□□□ 0.63
HMGCL-209ENST00000513148 GTF3C6Q969F1 213 aa18.99■□□□□ 0.63
HMGCL-209ENST00000513148 MRPL11Q9Y3B7 192 aaKnown RBP18.99■□□□□ 0.63
HMGCL-209ENST00000513148 ADCY3O60266 1144 aa18.98■□□□□ 0.63
HMGCL-209ENST00000513148 DDIT3P35638 169 aa18.98■□□□□ 0.63
HMGCL-209ENST00000513148 AKAP17AQ02040 695 aaKnown RBP18.98■□□□□ 0.63
HMGCL-209ENST00000513148 CPLX2Q6PUV4 134 aaKnown RBP18.98■□□□□ 0.63
HMGCL-209ENST00000513148 SLC30A10Q6XR72 485 aa18.98■□□□□ 0.63
HMGCL-209ENST00000513148 CYP39A1Q9NYL5 469 aa18.98■□□□□ 0.63
HMGCL-209ENST00000513148 LCTP09848 1927 aa18.98■□□□□ 0.63
HMGCL-209ENST00000513148 CALML3P27482 149 aa18.98■□□□□ 0.63
HMGCL-209ENST00000513148 SH3TC2Q8TF17 1288 aa18.98■□□□□ 0.63
HMGCL-209ENST00000513148 TBC1D5Q92609 795 aa18.98■□□□□ 0.63
HMGCL-209ENST00000513148 PFASO15067 1338 aa18.98■□□□□ 0.63
HMGCL-209ENST00000513148 CFBP00751 764 aa18.97■□□□□ 0.63
HMGCL-209ENST00000513148 CNTN2Q02246 1040 aa18.97■□□□□ 0.63
HMGCL-209ENST00000513148 IRF5Q13568 498 aa18.97■□□□□ 0.63
HMGCL-209ENST00000513148 BAATQ14032 418 aaPredicted RBP18.97■□□□□ 0.63
HMGCL-209ENST00000513148 SLC9C1Q4G0N8 1177 aa18.97■□□□□ 0.63
HMGCL-209ENST00000513148 WWC2Q6AWC2 1192 aa18.97■□□□□ 0.63
HMGCL-209ENST00000513148 RNF207Q6ZRF8 634 aa18.97■□□□□ 0.63
HMGCL-209ENST00000513148 ZSCAN30Q86W11 494 aa18.97■□□□□ 0.63
HMGCL-209ENST00000513148 CCDC83Q8IWF9 413 aa18.97■□□□□ 0.63
HMGCL-209ENST00000513148 TRIM22Q8IYM9 498 aa18.97■□□□□ 0.63
HMGCL-209ENST00000513148 PURBQ96QR8 312 aaKnown RBP18.97■□□□□ 0.63
HMGCL-209ENST00000513148 POTEB2H3BUK9 544 aa18.96■□□□□ 0.63
HMGCL-209ENST00000513148 OPLAHO14841 1288 aa18.96■□□□□ 0.63
HMGCL-209ENST00000513148 GRK4P32298 578 aa18.96■□□□□ 0.63
HMGCL-209ENST00000513148 RPS6P62753 249 aaKnown RBP18.96■□□□□ 0.63
HMGCL-209ENST00000513148 SSRP1Q08945 709 aaKnown RBP18.96■□□□□ 0.63
HMGCL-209ENST00000513148 ST3GAL1Q11201 340 aa18.96■□□□□ 0.63
HMGCL-209ENST00000513148 TRAF1Q13077 416 aa18.96■□□□□ 0.63
HMGCL-209ENST00000513148 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.96■□□□□ 0.63
HMGCL-209ENST00000513148 TRIB2Q92519 343 aa18.96■□□□□ 0.63
HMGCL-209ENST00000513148 RNF26Q9BY78 433 aaPredicted RBP18.96■□□□□ 0.63
HMGCL-209ENST00000513148 SLC5A4Q9NY91 659 aa18.96■□□□□ 0.63
HMGCL-209ENST00000513148 FLRT1Q9NZU1 646 aa18.96■□□□□ 0.63
HMGCL-209ENST00000513148 PRPF3O43395 683 aaKnown RBP18.96■□□□□ 0.63
HMGCL-209ENST00000513148 CDKL5O76039 1030 aa18.96■□□□□ 0.63
HMGCL-209ENST00000513148 MYCP01106 439 aaPredicted RBP18.96■□□□□ 0.63
HMGCL-209ENST00000513148 GZF1Q9H116 711 aaPredicted RBP18.96■□□□□ 0.63
HMGCL-209ENST00000513148 BIN2Q9UBW5 565 aaPredicted RBP18.96■□□□□ 0.63
HMGCL-209ENST00000513148 DNAJC25-GNG10A0A024R161 153 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 CTDNEP1O95476 244 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 HOXC6P09630 235 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 XRCC5P13010 732 aaKnown RBP18.95■□□□□ 0.62
HMGCL-209ENST00000513148 SCG2P13521 617 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 PFKFB3Q16875 520 aaPredicted RBP18.95■□□□□ 0.62
HMGCL-209ENST00000513148 ZNF792Q3KQV3 632 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 MCF2L2Q86YR7 1114 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 SLAIN1Q8ND83 568 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 ZSCAN31Q96LW9 406 aaPredicted RBP18.95■□□□□ 0.62
HMGCL-209ENST00000513148 HOXA13P31271 388 aaPredicted RBP18.95■□□□□ 0.62
HMGCL-209ENST00000513148 NAPAP54920 295 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 PKN1Q16512 942 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 TYW1BQ6NUM6 668 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 SMAP1Q8IYB5 467 aaPredicted RBP18.95■□□□□ 0.62
HMGCL-209ENST00000513148 SNX21Q969T3 373 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 MAML3Q96JK9 1138 aa18.95■□□□□ 0.62
HMGCL-209ENST00000513148 RBM27Q9P2N5 1060 aaKnown RBP18.95■□□□□ 0.62
HMGCL-209ENST00000513148 BRCA2P51587 3418 aa18.94■□□□□ 0.62
HMGCL-209ENST00000513148 TRIM32Q13049 653 aa18.94■□□□□ 0.62
HMGCL-209ENST00000513148 PXYLP1Q8TE99 480 aa18.94■□□□□ 0.62
HMGCL-209ENST00000513148 SH2B1Q9NRF2 756 aaPredicted RBP18.94■□□□□ 0.62
HMGCL-209ENST00000513148 DDX49Q9Y6V7 483 aaKnown RBP18.94■□□□□ 0.62
HMGCL-209ENST00000513148 STXBP3O00186 592 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 FAM133AQ8N9E0 248 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 GBP4Q96PP9 640 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 BARHL2Q9NY43 387 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 MCM3APO60318 1980 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 JAK2O60674 1132 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 DEXIO95424 95 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 INHAP05111 366 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 CYP2C19P33261 490 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 NSUN7Q8NE18 718 aaKnown RBP18.93■□□□□ 0.62
HMGCL-209ENST00000513148 TMX3Q96JJ7 454 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 FGD4Q96M96 766 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 AIFM3Q96NN9 605 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 COL20A1Q9P218 1284 aa18.93■□□□□ 0.62
HMGCL-209ENST00000513148 ASTN1O14525 1302 aa18.92■□□□□ 0.62
HMGCL-209ENST00000513148 SOWAHBA6NEL2 793 aa18.92■□□□□ 0.62
HMGCL-209ENST00000513148 HMGCRP04035 888 aa18.92■□□□□ 0.62
HMGCL-209ENST00000513148 MCM2P49736 904 aa18.92■□□□□ 0.62
HMGCL-209ENST00000513148 TNS4Q8IZW8 715 aa18.92■□□□□ 0.62
HMGCL-209ENST00000513148 RGS22Q8NE09 1264 aa18.92■□□□□ 0.62
HMGCL-209ENST00000513148 SYTL5Q8TDW5 730 aaPredicted RBP18.92■□□□□ 0.62
HMGCL-209ENST00000513148 VPS54Q9P1Q0 977 aa18.92■□□□□ 0.62
HMGCL-209ENST00000513148 GCOM1H8Y6P7 765 aaPredicted RBP18.91■□□□□ 0.62
HMGCL-209ENST00000513148 hCG_1984214I3L0E3 225 aa18.91■□□□□ 0.62
HMGCL-209ENST00000513148 POLR2MP0CAP2 368 aa18.91■□□□□ 0.62
HMGCL-209ENST00000513148 HSD17B4P51659 736 aa18.91■□□□□ 0.62
HMGCL-209ENST00000513148 USP17L6PQ6QN14 398 aa18.91■□□□□ 0.62
HMGCL-209ENST00000513148 FCHSD1Q86WN1 690 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms