RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 EPOPA6NHQ4 379 aa16.56■□□□□ 0.24
SPCS3-204ENST00000513139 KIF28PB7ZC32 967 aa16.56■□□□□ 0.24
SPCS3-204ENST00000513139 TMEM232C9JQI7 657 aa16.56■□□□□ 0.24
SPCS3-204ENST00000513139 PITPNM1O00562 1244 aa16.56■□□□□ 0.24
SPCS3-204ENST00000513139 TAP1Q03518 808 aa16.56■□□□□ 0.24
SPCS3-204ENST00000513139 DUSP28Q4G0W2 176 aa16.56■□□□□ 0.24
SPCS3-204ENST00000513139 SLFN13Q68D06 897 aa16.56■□□□□ 0.24
SPCS3-204ENST00000513139 DEFB128Q7Z7B8 93 aa16.56■□□□□ 0.24
SPCS3-204ENST00000513139 STK11IPQ8N1F8 1099 aa16.56■□□□□ 0.24
SPCS3-204ENST00000513139 LRRC47Q8N1G4 583 aaKnown RBP16.56■□□□□ 0.24
SPCS3-204ENST00000513139 GMCL1Q96IK5 515 aa16.56■□□□□ 0.24
SPCS3-204ENST00000513139 TRMT13Q9NUP7 481 aaKnown RBP16.56■□□□□ 0.24
SPCS3-204ENST00000513139 CYP39A1Q9NYL5 469 aa16.56■□□□□ 0.24
SPCS3-204ENST00000513139 LOC102724159A0A0B4J2E5 919 aa16.55■□□□□ 0.24
SPCS3-204ENST00000513139 CYP2C9P11712 490 aa16.55■□□□□ 0.24
SPCS3-204ENST00000513139 PTGS1P23219 599 aa16.55■□□□□ 0.24
SPCS3-204ENST00000513139 PURAQ00577 322 aaKnown RBP16.55■□□□□ 0.24
SPCS3-204ENST00000513139 PWP2Q15269 919 aaKnown RBP16.55■□□□□ 0.24
SPCS3-204ENST00000513139 KIAA1211Q6ZU35 1233 aa16.55■□□□□ 0.24
SPCS3-204ENST00000513139 FBXO16Q8IX29 292 aaPredicted RBP16.55■□□□□ 0.24
SPCS3-204ENST00000513139 SIRT2Q8IXJ6 389 aa16.55■□□□□ 0.24
SPCS3-204ENST00000513139 STAG1Q8WVM7 1258 aa16.55■□□□□ 0.24
SPCS3-204ENST00000513139 CERS4Q9HA82 394 aa16.55■□□□□ 0.24
SPCS3-204ENST00000513139 C11orf16Q9NQ32 467 aa16.55■□□□□ 0.24
SPCS3-204ENST00000513139 LMCD1Q9NZU5 365 aa16.55■□□□□ 0.24
SPCS3-204ENST00000513139 ALAS1P13196 640 aa16.54■□□□□ 0.24
SPCS3-204ENST00000513139 GNAT2P19087 354 aa16.54■□□□□ 0.24
SPCS3-204ENST00000513139 CPT1AP50416 773 aa16.54■□□□□ 0.24
SPCS3-204ENST00000513139 KRT40Q6A162 431 aa16.54■□□□□ 0.24
SPCS3-204ENST00000513139 EEPD1Q7L9B9 569 aa16.54■□□□□ 0.24
SPCS3-204ENST00000513139 HERC6Q8IVU3 1022 aa16.54■□□□□ 0.24
SPCS3-204ENST00000513139 NEDD1Q8NHV4 660 aa16.54■□□□□ 0.24
SPCS3-204ENST00000513139 PANK1Q8TE04 598 aa16.54■□□□□ 0.24
SPCS3-204ENST00000513139 ARNTL2Q8WYA1 636 aa16.54■□□□□ 0.24
SPCS3-204ENST00000513139 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
SPCS3-204ENST00000513139 SIP14410 1827 aa16.54■□□□□ 0.24
SPCS3-204ENST00000513139 PI4K2BG5E9Z4 385 aa16.53■□□□□ 0.24
SPCS3-204ENST00000513139 BAIAP3O94812 1187 aa16.53■□□□□ 0.24
SPCS3-204ENST00000513139 MS4A1P11836 297 aa16.53■□□□□ 0.24
SPCS3-204ENST00000513139 SLC1A4P43007 532 aa16.53■□□□□ 0.24
SPCS3-204ENST00000513139 IKQ13123 557 aaPredicted RBP16.53■□□□□ 0.24
SPCS3-204ENST00000513139 GRB10Q13322 594 aa16.53■□□□□ 0.24
SPCS3-204ENST00000513139 PPP4R3BQ5MIZ7 849 aa16.53■□□□□ 0.24
SPCS3-204ENST00000513139 TMEM63BQ5T3F8 832 aa16.53■□□□□ 0.24
SPCS3-204ENST00000513139 NFRKBQ6P4R8 1299 aa16.53■□□□□ 0.24
SPCS3-204ENST00000513139 APPBP2Q92624 585 aa16.53■□□□□ 0.24
SPCS3-204ENST00000513139 MTG1Q9BT17 334 aaPredicted RBP16.53■□□□□ 0.24
SPCS3-204ENST00000513139 ADD3Q9UEY8 706 aaKnown RBP16.53■□□□□ 0.24
SPCS3-204ENST00000513139 RBM47A0AV96 593 aaKnown RBP16.52■□□□□ 0.24
SPCS3-204ENST00000513139 LPXNO60711 386 aa16.52■□□□□ 0.24
SPCS3-204ENST00000513139 PRDM1O75626 825 aa16.52■□□□□ 0.24
SPCS3-204ENST00000513139 IQCF3P0C7M6 154 aa16.52■□□□□ 0.24
SPCS3-204ENST00000513139 TSPY3P0CV98 308 aa16.52■□□□□ 0.24
SPCS3-204ENST00000513139 TSPY8P0CW00 308 aa16.52■□□□□ 0.24
SPCS3-204ENST00000513139 TDO2P48775 406 aa16.52■□□□□ 0.24
SPCS3-204ENST00000513139 PTPN11Q06124 597 aaPredicted RBP16.52■□□□□ 0.24
SPCS3-204ENST00000513139 PDE4BQ07343 736 aa16.52■□□□□ 0.24
SPCS3-204ENST00000513139 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
SPCS3-204ENST00000513139 RETREG2Q8NC44 543 aa16.52■□□□□ 0.24
SPCS3-204ENST00000513139 KHSRPQ92945 711 aaKnown RBP eCLIP16.52■□□□□ 0.242e-6■■■□□ 15.6
SPCS3-204ENST00000513139 OSBP2Q969R2 916 aa16.52■□□□□ 0.24
SPCS3-204ENST00000513139 WDR11Q9BZH6 1224 aa16.52■□□□□ 0.24
SPCS3-204ENST00000513139 EPB41L4AQ9HCS5 686 aaPredicted RBP16.52■□□□□ 0.24
SPCS3-204ENST00000513139 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.24
SPCS3-204ENST00000513139 DDX49Q9Y6V7 483 aaKnown RBP16.52■□□□□ 0.24
SPCS3-204ENST00000513139 WDFY4Q6ZS81 3184 aa16.51■□□□□ 0.23
SPCS3-204ENST00000513139 KPNA6O60684 536 aa16.51■□□□□ 0.23
SPCS3-204ENST00000513139 ARHGEF15O94989 841 aa16.51■□□□□ 0.23
SPCS3-204ENST00000513139 BFSP2Q13515 415 aa16.51■□□□□ 0.23
SPCS3-204ENST00000513139 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
SPCS3-204ENST00000513139 NBPF20Q3BBV1 942 aa16.51■□□□□ 0.23
SPCS3-204ENST00000513139 BRDTQ58F21 947 aaPredicted RBP16.51■□□□□ 0.23
SPCS3-204ENST00000513139 RCSD1Q6JBY9 416 aa16.51■□□□□ 0.23
SPCS3-204ENST00000513139 KBTBD3Q8NAB2 608 aa16.51■□□□□ 0.23
SPCS3-204ENST00000513139 FTOQ9C0B1 505 aaKnown RBP eCLIP16.51■□□□□ 0.23
SPCS3-204ENST00000513139 ZBTB40Q9NUA8 1239 aa16.51■□□□□ 0.23
SPCS3-204ENST00000513139 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
SPCS3-204ENST00000513139 RAD50Q92878 1312 aa16.5■□□□□ 0.23
SPCS3-204ENST00000513139 NKRFO15226 690 aaKnown RBP eCLIP16.5■□□□□ 0.23
SPCS3-204ENST00000513139 GPAA1O43292 621 aa16.5■□□□□ 0.23
SPCS3-204ENST00000513139 ZFYP08048 801 aaPredicted RBP16.5■□□□□ 0.23
SPCS3-204ENST00000513139 MYL3P08590 195 aa16.5■□□□□ 0.23
SPCS3-204ENST00000513139 MCCP23508 829 aa16.5■□□□□ 0.23
SPCS3-204ENST00000513139 NSMFQ6X4W1 530 aa16.5■□□□□ 0.23
SPCS3-204ENST00000513139 CCPG1Q9ULG6 757 aa16.5■□□□□ 0.23
SPCS3-204ENST00000513139 PRR12Q9ULL5 1215 aa16.5■□□□□ 0.23
SPCS3-204ENST00000513139 DDX19BQ9UMR2 479 aa16.5■□□□□ 0.23
SPCS3-204ENST00000513139 PRR33A8MZF0 331 aa16.49■□□□□ 0.23
SPCS3-204ENST00000513139 PATL2C9JE40 543 aaKnown RBP16.49■□□□□ 0.23
SPCS3-204ENST00000513139 RNF113AO15541 343 aaKnown RBP16.49■□□□□ 0.23
SPCS3-204ENST00000513139 APPP05067 770 aa16.49■□□□□ 0.23
SPCS3-204ENST00000513139 ICAM1P05362 532 aa16.49■□□□□ 0.23
SPCS3-204ENST00000513139 SLC3A2P08195 630 aaKnown RBP16.49■□□□□ 0.23
SPCS3-204ENST00000513139 KCNJ6P48051 423 aa16.49■□□□□ 0.23
SPCS3-204ENST00000513139 ALDH5A1P51649 535 aaPredicted RBP16.49■□□□□ 0.23
SPCS3-204ENST00000513139 TFAP4Q01664 338 aa16.49■□□□□ 0.23
SPCS3-204ENST00000513139 FAM47CQ5HY64 1035 aa16.49■□□□□ 0.23
SPCS3-204ENST00000513139 IFNL3Q8IZI9 196 aa16.49■□□□□ 0.23
SPCS3-204ENST00000513139 LRRCC1Q9C099 1032 aa16.49■□□□□ 0.23
SPCS3-204ENST00000513139 CD320Q9NPF0 282 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms