RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	RPS6	P62753	249 aa	Known RBP	14.71	□□□□□ -0.05
UBE2D3-231	ENST00000513098	RNF207	Q6ZRF8	634 aa		14.71	□□□□□ -0.05
UBE2D3-231	ENST00000513098	NOL8	Q76FK4	1167 aa	Known RBP	14.71	□□□□□ -0.05
UBE2D3-231	ENST00000513098	ENAH	Q8N8S7	591 aa	Predicted RBP	14.71	□□□□□ -0.05
UBE2D3-231	ENST00000513098	VTI1A	Q96AJ9	217 aa		14.71	□□□□□ -0.05
UBE2D3-231	ENST00000513098	ZKSCAN3	Q9BRR0	538 aa		14.71	□□□□□ -0.05
UBE2D3-231	ENST00000513098	LAMA4	Q16363	1823 aa		14.71	□□□□□ -0.06
UBE2D3-231	ENST00000513098	GRIN2D	O15399	1336 aa		14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	PTPDC1	A2A3K4	754 aa		14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	BEX3	Q00994	111 aa		14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	ASPRV1	Q53RT3	343 aa		14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	TTC22	Q5TAA0	569 aa		14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	KIAA1211	Q6ZU35	1233 aa		14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	FBXO16	Q8IX29	292 aa	Predicted RBP	14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	SLC17A8	Q8NDX2	589 aa		14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	GUCD1	Q96NT3	240 aa		14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	MPHOSPH6	Q99547	160 aa	Known RBP	14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	KAT14	Q9H8E8	782 aa		14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	DDX49	Q9Y6V7	483 aa	Known RBP	14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	EYS	Q5T1H1	3165 aa		14.7	□□□□□ -0.06
UBE2D3-231	ENST00000513098	PRUNE2	Q8WUY3	3088 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098		B4DLN1	442 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098		B4E1Z4	1266 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	NKRF	O15226	690 aa	Known RBP eCLIP	14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	TLR3	O15455	904 aa	Known RBP	14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	GOLGA8H	P0CJ92	632 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	GSPT1	P15170	499 aa	Known RBP	14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	MRPL12	P52815	198 aa	Known RBP	14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	ITGA7	Q13683	1181 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	TMEM63B	Q5T3F8	832 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	CXCL17	Q6UXB2	119 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	C16orf59	Q7L2K0	433 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	EEPD1	Q7L9B9	569 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	WDR11	Q9BZH6	1224 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	UBA5	Q9GZZ9	404 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	IL25	Q9H293	177 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	SEMA6B	Q9H3T3	888 aa		14.69	□□□□□ -0.06
UBE2D3-231	ENST00000513098	RAD50	Q92878	1312 aa		14.68	□□□□□ -0.06
UBE2D3-231	ENST00000513098	TMEM265	A0A087WTH1	108 aa		14.68	□□□□□ -0.06
UBE2D3-231	ENST00000513098	CALML3	P27482	149 aa		14.68	□□□□□ -0.06
UBE2D3-231	ENST00000513098	PPIG	Q13427	754 aa	Known RBP eCLIP	14.68	□□□□□ -0.06	2e-7	■□□□□ 10.5
UBE2D3-231	ENST00000513098	ZNF697	Q5TEC3	545 aa		14.68	□□□□□ -0.06
UBE2D3-231	ENST00000513098	RASIP1	Q5U651	963 aa		14.68	□□□□□ -0.06
UBE2D3-231	ENST00000513098	SLC30A10	Q6XR72	485 aa		14.68	□□□□□ -0.06
UBE2D3-231	ENST00000513098	ADGRF4	Q8IZF3	695 aa		14.68	□□□□□ -0.06
UBE2D3-231	ENST00000513098	TMEM199	Q8N511	208 aa		14.68	□□□□□ -0.06
UBE2D3-231	ENST00000513098	RUFY2	Q8WXA3	655 aa		14.68	□□□□□ -0.06
UBE2D3-231	ENST00000513098	RNPC3	Q96LT9	517 aa	Known RBP	14.68	□□□□□ -0.06
UBE2D3-231	ENST00000513098	LRRC37A2	A6NM11	1700 aa		14.68	□□□□□ -0.06
UBE2D3-231	ENST00000513098	TNKS	O95271	1327 aa		14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	ABCB11	O95342	1321 aa		14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	PARP1	P09874	1014 aa	Known RBP	14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	CHML	P26374	656 aa		14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	CPT1A	P50416	773 aa		14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	SEC23A	Q15436	765 aa		14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	SCFD2	Q8WU76	684 aa		14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	UBAC1	Q9BSL1	405 aa		14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	JMJD4	Q9H9V9	463 aa		14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	POLR3E	Q9NVU0	708 aa		14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098	CUL9	Q8IWT3	2517 aa		14.67	□□□□□ -0.06
UBE2D3-231	ENST00000513098		A6NJR5	290 aa		14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	KPNA6	O60684	536 aa		14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	PTGS1	P23219	599 aa		14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	GHRHR	Q02643	423 aa		14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	PDE4D	Q08499	809 aa		14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	CDC37	Q16543	378 aa	Predicted RBP	14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	TMEM240	Q5SV17	173 aa		14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	MCF2L2	Q86YR7	1114 aa		14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	MTMR8	Q96EF0	704 aa		14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	IWS1	Q96ST2	819 aa		14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	CPVL	Q9H3G5	476 aa		14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	MAP3K20	Q9NYL2	800 aa	Known RBP	14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	MRPL11	Q9Y3B7	192 aa	Known RBP	14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098		U3KPZ7	1027 aa	Predicted RBP	14.66	□□□□□ -0.06
UBE2D3-231	ENST00000513098	PALM3	A6NDB9	673 aa	Predicted RBP	14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	CSF2RA	P15509	400 aa		14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	PURA	Q00577	322 aa	Known RBP	14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	QRICH1	Q2TAL8	776 aa		14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	USH1G	Q495M9	461 aa		14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	BRDT	Q58F21	947 aa	Predicted RBP	14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	IFIT1B	Q5T764	474 aa	Known RBP	14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	CCDC62	Q6P9F0	684 aa		14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	SAMD3	Q8N6K7	520 aa		14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	SYTL5	Q8TDW5	730 aa	Predicted RBP	14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	NSUN6	Q8TEA1	469 aa	Known RBP	14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	TBC1D5	Q92609	795 aa		14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	CDX2	Q99626	313 aa	Predicted RBP	14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	TTYH1	Q9H313	450 aa	Predicted RBP	14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	CHD9	Q3L8U1	2897 aa		14.65	□□□□□ -0.06
UBE2D3-231	ENST00000513098	SGSM2	O43147	1006 aa		14.64	□□□□□ -0.07
UBE2D3-231	ENST00000513098	B4GALT4	O60513	344 aa		14.64	□□□□□ -0.07
UBE2D3-231	ENST00000513098	CYP21A2	P08686	494 aa		14.64	□□□□□ -0.07
UBE2D3-231	ENST00000513098	SUPT20HL2	P0C7V6	817 aa		14.64	□□□□□ -0.07
UBE2D3-231	ENST00000513098	PTH1R	Q03431	593 aa		14.64	□□□□□ -0.07
UBE2D3-231	ENST00000513098	TRDN	Q13061	729 aa		14.64	□□□□□ -0.07
UBE2D3-231	ENST00000513098	TTLL4	Q14679	1199 aa		14.64	□□□□□ -0.07
UBE2D3-231	ENST00000513098	PPP2R5B	Q15173	497 aa		14.64	□□□□□ -0.07

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