RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 POLR2DO15514 142 aaKnown RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 ZWINTO95229 277 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 CYP2E1P05181 493 aaPredicted RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 LMNB1P20700 586 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 PPARGP37231 505 aaPredicted RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 PIK3CAP42336 1068 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 CYP2J2P51589 502 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 PTK2Q05397 1052 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 KLHL30Q0D2K2 578 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 Q3C1V9 767 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 SFMBT2Q5VUG0 894 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 ADALQ6DHV7 355 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 RINT1Q6NUQ1 792 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 SCYL2Q6P3W7 929 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 SPICE1Q8N0Z3 855 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 RAB3IPQ96QF0 476 aaPredicted RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 USP26Q9BXU7 913 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 PRDM5Q9NQX1 630 aaPredicted RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 ARMCX3Q9UH62 379 aaPredicted RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 A6NJR5 290 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 PHKA2P46019 1235 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 PDE6CP51160 858 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 MFAP3P55082 362 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 NEK9Q8TD19 979 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.66□□□□□ -1.66
VCAN-209ENST00000513016 PKNOX2Q96KN3 472 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 NT5C1BQ96P26 610 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 MTFR1LQ9H019 292 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 CNOT7Q9UIV1 285 aaKnown RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 S100BP04271 92 aaPredicted RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 TSPY1Q01534 308 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 RCSD1Q6JBY9 416 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 CYP26C1Q6V0L0 522 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 SYNRGQ9UMZ2 1314 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 DYNC1I1O14576 645 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 HUNKP57058 714 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 EVCP57679 992 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 TGFB2P61812 414 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 SEPT2Q15019 361 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 PPP2R5EQ16537 467 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 ATP2A3Q93084 1043 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 RNF26Q9BY78 433 aaPredicted RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 USP44Q9H0E7 712 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 TDRD3Q9H7E2 651 aaKnown RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 MAP3K20Q9NYL2 800 aaKnown RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 NKIRAS1Q9NYS0 192 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 ANKFY1Q9P2R3 1169 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 STK17AQ9UEE5 414 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 TTLL3Q9Y4R7 772 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 CDHR2Q9BYE9 1310 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 EIF3CLB5ME19 914 aaKnown RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 ADD2P35612 726 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 TECP42680 631 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 SLC15A2Q16348 729 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 EIF3CQ99613 913 aaKnown RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 GCOM2Q9BZD3 368 aaPredicted RBP4.66□□□□□ -1.66
VCAN-209ENST00000513016 DNAJC25Q9H1X3 360 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 ACAD9Q9H845 621 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.66□□□□□ -1.66
VCAN-209ENST00000513016 PCDHA4Q9UN74 947 aa4.66□□□□□ -1.66
VCAN-209ENST00000513016 PNMA6FA0A0J9YX94 578 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 HNRNPDLO14979 420 aaKnown RBP4.65□□□□□ -1.66
VCAN-209ENST00000513016 SORBS3O60504 671 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 TYRO3Q06418 890 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 MTERF2Q49AM1 385 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 FAM26FQ5R3K3 315 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 CDC42BPGQ6DT37 1551 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 RUFY4Q6ZNE9 571 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 PGBD4Q96DM1 585 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 PPP1R9BQ96SB3 815 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 MYL10Q9BUA6 226 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 TBC1D22BQ9NU19 505 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 PNMA6EA0A0J9YXQ4 647 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 SLC25A27O95847 323 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 GOLGA8HP0CJ92 632 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 MAGEA1P43355 309 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 TPD52P55327 224 aaPredicted RBP4.65□□□□□ -1.66
VCAN-209ENST00000513016 RDH13Q8NBN7 331 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 PARD3BQ8TEW8 1205 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 RSAD2Q8WXG1 361 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 TBC1D7Q9P0N9 293 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 PER1O15534 1290 aaPredicted RBP4.65□□□□□ -1.66
VCAN-209ENST00000513016 SASH1O94885 1247 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 GH2P01242 217 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 TFRCP02786 760 aaKnown RBP4.65□□□□□ -1.66
VCAN-209ENST00000513016 CDK8P49336 464 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 KCNQ4P56696 695 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 KRT76Q01546 638 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 CDC37Q16543 378 aaPredicted RBP4.65□□□□□ -1.66
VCAN-209ENST00000513016 ARHGAP44Q17R89 818 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 TTC39CQ8N584 583 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 MCPH1Q8NEM0 835 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.65□□□□□ -1.66
VCAN-209ENST00000513016 PHKBQ93100 1093 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 VPS16Q9H269 839 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 TMX1Q9H3N1 280 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 KIAA1586Q9HCI6 787 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 EHD2Q9NZN4 543 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 PALD1Q9ULE6 856 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 KCNJ14Q9UNX9 436 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms