RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
PFDN1-205ENST00000512925 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
PFDN1-205ENST00000512925 STRBPQ96SI9 672 aaKnown RBP12.42□□□□□ -0.42
PFDN1-205ENST00000512925 HAUS7Q99871 368 aa12.42□□□□□ -0.42
PFDN1-205ENST00000512925 AP5M1Q9H0R1 490 aa12.42□□□□□ -0.42
PFDN1-205ENST00000512925 ACAD9Q9H845 621 aa12.42□□□□□ -0.42
PFDN1-205ENST00000512925 CTDP1Q9Y5B0 961 aaPredicted RBP12.42□□□□□ -0.42
PFDN1-205ENST00000512925 GSG1L2A8MUP6 293 aa12.41□□□□□ -0.42
PFDN1-205ENST00000512925 ZEB2O60315 1214 aa12.41□□□□□ -0.42
PFDN1-205ENST00000512925 GRB10Q13322 594 aa12.41□□□□□ -0.42
PFDN1-205ENST00000512925 FBXO16Q8IX29 292 aaPredicted RBP12.41□□□□□ -0.42
PFDN1-205ENST00000512925 GMCL1P1Q8NEA9 526 aa12.41□□□□□ -0.42
PFDN1-205ENST00000512925 PHOSPHO2Q8TCD6 241 aa12.41□□□□□ -0.42
PFDN1-205ENST00000512925 CEP95Q96GE4 821 aa12.41□□□□□ -0.42
PFDN1-205ENST00000512925 SLC9A7Q96T83 725 aa12.41□□□□□ -0.42
PFDN1-205ENST00000512925 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.41□□□□□ -0.42
PFDN1-205ENST00000512925 MKNK2Q9HBH9 465 aa12.41□□□□□ -0.42
PFDN1-205ENST00000512925 RNF146Q9NTX7 359 aa12.41□□□□□ -0.42
PFDN1-205ENST00000512925 MTMR4Q9NYA4 1195 aa12.41□□□□□ -0.42
PFDN1-205ENST00000512925 SYNPO2Q9UMS6 1093 aa12.41□□□□□ -0.42
PFDN1-205ENST00000512925 TNKSO95271 1327 aa12.4□□□□□ -0.42
PFDN1-205ENST00000512925 LRRC37A2A6NM11 1700 aa12.4□□□□□ -0.42
PFDN1-205ENST00000512925 SUPT20HL2P0C7V6 817 aa12.4□□□□□ -0.42
PFDN1-205ENST00000512925 FDX1P10109 184 aa12.4□□□□□ -0.42
PFDN1-205ENST00000512925 CHRM1P11229 460 aaPredicted RBP12.4□□□□□ -0.42
PFDN1-205ENST00000512925 BMP3P12645 472 aa12.4□□□□□ -0.42
PFDN1-205ENST00000512925 EEPD1Q7L9B9 569 aa12.4□□□□□ -0.42
PFDN1-205ENST00000512925 ALYREFQ86V81 257 aaKnown RBP12.4□□□□□ -0.42
PFDN1-205ENST00000512925 HERC6Q8IVU3 1022 aa12.4□□□□□ -0.42
PFDN1-205ENST00000512925 SIRT2Q8IXJ6 389 aa12.4□□□□□ -0.42
PFDN1-205ENST00000512925 RPAP2Q8IXW5 612 aaPredicted RBP12.4□□□□□ -0.42
PFDN1-205ENST00000512925 LRRC47Q8N1G4 583 aaKnown RBP12.4□□□□□ -0.42
PFDN1-205ENST00000512925 MORC4Q8TE76 937 aa12.4□□□□□ -0.42
PFDN1-205ENST00000512925 PURBQ96QR8 312 aaKnown RBP12.4□□□□□ -0.42
PFDN1-205ENST00000512925 COG6Q9Y2V7 657 aa12.4□□□□□ -0.42
PFDN1-205ENST00000512925 MINDY4BA8MYZ0 360 aa12.39□□□□□ -0.43
PFDN1-205ENST00000512925 TMEM232C9JQI7 657 aa12.39□□□□□ -0.43
PFDN1-205ENST00000512925 PRDM1O75626 825 aa12.39□□□□□ -0.43
PFDN1-205ENST00000512925 IQCF3P0C7M6 154 aa12.39□□□□□ -0.43
PFDN1-205ENST00000512925 PURAQ00577 322 aaKnown RBP12.39□□□□□ -0.43
PFDN1-205ENST00000512925 DUSP28Q4G0W2 176 aa12.39□□□□□ -0.43
PFDN1-205ENST00000512925 SLFN13Q68D06 897 aa12.39□□□□□ -0.43
PFDN1-205ENST00000512925 GIMAP6Q6P9H5 292 aa12.39□□□□□ -0.43
PFDN1-205ENST00000512925 KIAA1211Q6ZU35 1233 aa12.39□□□□□ -0.43
PFDN1-205ENST00000512925 TRERF1Q96PN7 1200 aa12.39□□□□□ -0.43
PFDN1-205ENST00000512925 CYP39A1Q9NYL5 469 aa12.39□□□□□ -0.43
PFDN1-205ENST00000512925 LCHNA4D1U4 455 aa12.38□□□□□ -0.43
PFDN1-205ENST00000512925 TTLL1O95922 423 aa12.38□□□□□ -0.43
PFDN1-205ENST00000512925 ACTN1P12814 892 aa12.38□□□□□ -0.43
PFDN1-205ENST00000512925 RFC2P35250 354 aa12.38□□□□□ -0.43
PFDN1-205ENST00000512925 TKFCQ3LXA3 575 aa12.38□□□□□ -0.43
PFDN1-205ENST00000512925 MUM1L1Q5H9M0 696 aa12.38□□□□□ -0.43
PFDN1-205ENST00000512925 PPP1R13LQ8WUF5 828 aa12.38□□□□□ -0.43
PFDN1-205ENST00000512925 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
PFDN1-205ENST00000512925 EPB41L4AQ9HCS5 686 aaPredicted RBP12.38□□□□□ -0.43
PFDN1-205ENST00000512925 VTA1Q9NP79 307 aa12.38□□□□□ -0.43
PFDN1-205ENST00000512925 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.37□□□□□ -0.43
PFDN1-205ENST00000512925 RBM47A0AV96 593 aaKnown RBP12.37□□□□□ -0.43
PFDN1-205ENST00000512925 PRR33A8MZF0 331 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 KIF28PB7ZC32 967 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 RAB11FIP3O75154 756 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 ALAS1P13196 640 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 STAT2P52630 851 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 SNAP25P60880 206 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 GPNMBQ14956 572 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 NBPF20Q3BBV1 942 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 ZSCAN25Q6NSZ9 544 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 ZNF444Q8N0Y2 327 aaPredicted RBP12.37□□□□□ -0.43
PFDN1-205ENST00000512925 NEDD1Q8NHV4 660 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 PANK1Q8TE04 598 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 STAG1Q8WVM7 1258 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 OSBP2Q969R2 916 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 GMCL1Q96IK5 515 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 POLR3EQ9NVU0 708 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 LMCD1Q9NZU5 365 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 BRWD1Q9NSI6 2320 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 SCN5AQ14524 2016 aa12.37□□□□□ -0.43
PFDN1-205ENST00000512925 PLA2G6O60733 806 aa12.36□□□□□ -0.43
PFDN1-205ENST00000512925 MYL3P08590 195 aa12.36□□□□□ -0.43
PFDN1-205ENST00000512925 TMCO2Q7Z6W1 182 aaPredicted RBP12.36□□□□□ -0.43
PFDN1-205ENST00000512925 FAM160B2Q86V87 743 aa12.36□□□□□ -0.43
PFDN1-205ENST00000512925 FAM178BQ8IXR5 827 aa12.36□□□□□ -0.43
PFDN1-205ENST00000512925 CHURC1Q8WUH1 139 aa12.36□□□□□ -0.43
PFDN1-205ENST00000512925 MTG1Q9BT17 334 aaPredicted RBP12.36□□□□□ -0.43
PFDN1-205ENST00000512925 WDR11Q9BZH6 1224 aa12.36□□□□□ -0.43
PFDN1-205ENST00000512925 PLIN4Q96Q06 1357 aa12.35□□□□□ -0.43
PFDN1-205ENST00000512925 BAIAP3O94812 1187 aa12.35□□□□□ -0.43
PFDN1-205ENST00000512925 MCCP23508 829 aa12.35□□□□□ -0.43
PFDN1-205ENST00000512925 NFRKBQ6P4R8 1299 aa12.35□□□□□ -0.43
PFDN1-205ENST00000512925 GJD3Q8N144 294 aa12.35□□□□□ -0.43
PFDN1-205ENST00000512925 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.35□□□□□ -0.43
PFDN1-205ENST00000512925 GDPD5Q8WTR4 605 aa12.35□□□□□ -0.43
PFDN1-205ENST00000512925 CHMP4CQ96CF2 233 aa12.35□□□□□ -0.43
PFDN1-205ENST00000512925 CTAGE1Q96RT6 745 aa12.35□□□□□ -0.43
PFDN1-205ENST00000512925 FTOQ9C0B1 505 aaKnown RBP eCLIP12.35□□□□□ -0.43
PFDN1-205ENST00000512925 SUGCTQ9HAC7 445 aa12.35□□□□□ -0.43
PFDN1-205ENST00000512925 PRR12Q9ULL5 1215 aa12.35□□□□□ -0.43
PFDN1-205ENST00000512925 WDFY4Q6ZS81 3184 aa12.35□□□□□ -0.43
PFDN1-205ENST00000512925 TET1Q8NFU7 2136 aa12.34□□□□□ -0.43
PFDN1-205ENST00000512925 RBAK-RBAKDNI3L0D1 243 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms