RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 PTGS1P23219 599 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 RRP1P56182 461 aaKnown RBP11.48□□□□□ -0.57
CLCN3-208ENST00000512813 COASYQ13057 564 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 MVPQ14764 893 aaKnown RBP11.48□□□□□ -0.57
CLCN3-208ENST00000512813 TCTN1Q2MV58 587 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 TMEM192Q8IY95 271 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 SPICE1Q8N0Z3 855 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 SPATA5Q8NB90 893 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 TEX13BQ9BXU2 312 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 LMAN2LQ9H0V9 348 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 POLR3EQ9NVU0 708 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 PPP1R9AQ9ULJ8 1098 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 MICAL3Q7RTP6 2002 aa11.48□□□□□ -0.57
CLCN3-208ENST00000512813 VAMP4O75379 141 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 PARNO95453 639 aaKnown RBP11.47□□□□□ -0.57
CLCN3-208ENST00000512813 SDHBP21912 280 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 GTF2F1P35269 517 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLCN3-208ENST00000512813 IL15P40933 162 aaPredicted RBP11.47□□□□□ -0.57
CLCN3-208ENST00000512813 NDUFV1P49821 464 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 PURAQ00577 322 aaKnown RBP11.47□□□□□ -0.57
CLCN3-208ENST00000512813 ADAM15Q13444 863 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 CCDC27Q2M243 656 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 FAM47CQ5HY64 1035 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 NAA16Q6N069 864 aaPredicted RBP11.47□□□□□ -0.57
CLCN3-208ENST00000512813 ADGRA1Q86SQ6 560 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 CAGE1Q8TC20 777 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 RPGRIP1Q96KN7 1286 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 HAUS7Q99871 368 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 VCPKMTQ9H867 229 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 INCENPQ9NQS7 918 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 FBXO28Q9NVF7 368 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 LRP2BPQ9P2M1 347 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 USP15Q9Y4E8 981 aaPredicted RBP11.47□□□□□ -0.57
CLCN3-208ENST00000512813 SPEGQ15772 3267 aa11.47□□□□□ -0.57
CLCN3-208ENST00000512813 CLCN5P51795 746 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 IKBKEQ14164 716 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 RALBP1Q15311 655 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 ANGPT1Q15389 498 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 SNRNP48Q6IEG0 339 aaKnown RBP11.46□□□□□ -0.57
CLCN3-208ENST00000512813 NFRKBQ6P4R8 1299 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 UBALD2Q8IYN6 164 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 CCDC155Q8N6L0 562 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 RUBCNQ92622 972 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 XAGE2Q96GT9 111 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 HINFPQ9BQA5 517 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 SH2D4AQ9H788 454 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 CLEC1BQ9P126 229 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 TMX2Q9Y320 296 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 RIPK3Q9Y572 518 aa11.46□□□□□ -0.57
CLCN3-208ENST00000512813 TRIP12Q14669 1992 aaPredicted RBP11.46□□□□□ -0.58
CLCN3-208ENST00000512813 NAV2Q8IVL1 2488 aa11.45□□□□□ -0.58
CLCN3-208ENST00000512813 SOBPA7XYQ1 873 aa11.45□□□□□ -0.58
CLCN3-208ENST00000512813 NBNO60934 754 aa11.45□□□□□ -0.58
CLCN3-208ENST00000512813 SELPP16109 830 aa11.45□□□□□ -0.58
CLCN3-208ENST00000512813 ATF7P17544 494 aaPredicted RBP11.45□□□□□ -0.58
CLCN3-208ENST00000512813 ATXN1P54253 815 aaKnown RBP11.45□□□□□ -0.58
CLCN3-208ENST00000512813 TIMM10P62072 90 aa11.45□□□□□ -0.58
CLCN3-208ENST00000512813 PTPN11Q06124 597 aaPredicted RBP11.45□□□□□ -0.58
CLCN3-208ENST00000512813 LRRC8DQ7L1W4 858 aa11.45□□□□□ -0.58
CLCN3-208ENST00000512813 ZBTB33Q86T24 672 aa11.45□□□□□ -0.58
CLCN3-208ENST00000512813 TTC6Q86TZ1 520 aa11.45□□□□□ -0.58
CLCN3-208ENST00000512813 CYP2W1Q8TAV3 490 aa11.45□□□□□ -0.58
CLCN3-208ENST00000512813 MTG1Q9BT17 334 aaPredicted RBP11.45□□□□□ -0.58
CLCN3-208ENST00000512813 IGFLR1Q9H665 355 aa11.45□□□□□ -0.58
CLCN3-208ENST00000512813 FRYQ5TBA9 3013 aa11.44□□□□□ -0.58
CLCN3-208ENST00000512813 C5orf67F2Z3F1 127 aa11.44□□□□□ -0.58
CLCN3-208ENST00000512813 MPHOSPH10O00566 681 aaKnown RBP11.44□□□□□ -0.58
CLCN3-208ENST00000512813 ARID4AP29374 1257 aaPredicted RBP11.44□□□□□ -0.58
CLCN3-208ENST00000512813 RBL2Q08999 1139 aa11.44□□□□□ -0.58
CLCN3-208ENST00000512813 DMWDQ09019 674 aa11.44□□□□□ -0.58
CLCN3-208ENST00000512813 IQSEC1Q6DN90 963 aa11.44□□□□□ -0.58
CLCN3-208ENST00000512813 CCDC105Q8IYK2 499 aa11.44□□□□□ -0.58
CLCN3-208ENST00000512813 ARHGEF10LQ9HCE6 1279 aa11.44□□□□□ -0.58
CLCN3-208ENST00000512813 IGSF5Q9NSI5 407 aa11.44□□□□□ -0.58
CLCN3-208ENST00000512813 NOD1Q9Y239 953 aa11.44□□□□□ -0.58
CLCN3-208ENST00000512813 NAV1Q8NEY1 1877 aa11.43□□□□□ -0.58
CLCN3-208ENST00000512813 AMHP03971 560 aa11.43□□□□□ -0.58
CLCN3-208ENST00000512813 GABPAQ06546 454 aa11.43□□□□□ -0.58
CLCN3-208ENST00000512813 MTMR3Q13615 1198 aa11.43□□□□□ -0.58
CLCN3-208ENST00000512813 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLCN3-208ENST00000512813 TMEM179Q6ZVK1 233 aa11.43□□□□□ -0.58
CLCN3-208ENST00000512813 SIAH1Q8IUQ4 282 aa11.43□□□□□ -0.58
CLCN3-208ENST00000512813 ANKRD35Q8N283 1001 aa11.43□□□□□ -0.58
CLCN3-208ENST00000512813 FAM133AQ8N9E0 248 aa11.43□□□□□ -0.58
CLCN3-208ENST00000512813 KREMEN2Q8NCW0 462 aa11.43□□□□□ -0.58
CLCN3-208ENST00000512813 C11orf84Q9BUA3 381 aaPredicted RBP11.43□□□□□ -0.58
CLCN3-208ENST00000512813 IL16Q14005 1332 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 FANCIQ9NVI1 1328 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 ATP2A1O14983 1001 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 GRM6O15303 877 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 RB1P06400 928 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 MYL3P08590 195 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 USP5P45974 858 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 CPT1AP50416 773 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 DYNLL1P63167 89 aaKnown RBP11.42□□□□□ -0.58
CLCN3-208ENST00000512813 ICA1Q05084 483 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 TMEM63BQ5T3F8 832 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 CWF19L1Q69YN2 538 aaKnown RBP11.42□□□□□ -0.58
CLCN3-208ENST00000512813 TAPT1Q6NXT6 567 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 CLEC10AQ8IUN9 316 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms