RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 USH1GQ495M9 461 aa14.07□□□□□ -0.16
CDK7-208ENST00000512687 ASPRV1Q53RT3 343 aa14.07□□□□□ -0.16
CDK7-208ENST00000512687 RASEFQ8IZ41 740 aa14.07□□□□□ -0.16
CDK7-208ENST00000512687 ADGRF4Q8IZF3 695 aa14.07□□□□□ -0.16
CDK7-208ENST00000512687 STAG2Q8N3U4 1231 aa14.07□□□□□ -0.16
CDK7-208ENST00000512687 UBAC1Q9BSL1 405 aa14.07□□□□□ -0.16
CDK7-208ENST00000512687 SENP2Q9HC62 589 aa14.07□□□□□ -0.16
CDK7-208ENST00000512687 GNEQ9Y223 722 aaKnown RBP14.07□□□□□ -0.16
CDK7-208ENST00000512687 MOXD2PA6NHM9 499 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 E7EWF7 191 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 ASGR1P07306 291 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 SMPD1P17405 629 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 ITGB8P26012 769 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 CALML3P27482 149 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 RPS6P62753 249 aaKnown RBP14.06□□□□□ -0.16
CDK7-208ENST00000512687 NKX3-2P78367 333 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 TNFAIP2Q03169 654 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 SLC35G1Q2M3R5 365 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 IFIT1BQ5T764 474 aaKnown RBP14.06□□□□□ -0.16
CDK7-208ENST00000512687 TLK2Q86UE8 772 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 STARD7Q9NQZ5 370 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 SCN5AQ14524 2016 aa14.06□□□□□ -0.16
CDK7-208ENST00000512687 PQBP1O60828 265 aaKnown RBP14.05□□□□□ -0.16
CDK7-208ENST00000512687 PARP1P09874 1014 aaKnown RBP14.05□□□□□ -0.16
CDK7-208ENST00000512687 ANTXR2P58335 489 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 COL9A3Q14050 684 aaPredicted RBP14.05□□□□□ -0.16
CDK7-208ENST00000512687 QRICH1Q2TAL8 776 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 RNF207Q6ZRF8 634 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 CHST3Q7LGC8 479 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 TBC1D5Q92609 795 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 MAP4K1Q92918 833 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 BADQ92934 168 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 JMJD4Q9H9V9 463 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 VTA1Q9NP79 307 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 PRKAG2Q9UGJ0 569 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 MAD2L2Q9UI95 211 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 RBM8AQ9Y5S9 174 aaKnown RBP14.05□□□□□ -0.16
CDK7-208ENST00000512687 TANC1Q9C0D5 1861 aa14.05□□□□□ -0.16
CDK7-208ENST00000512687 CLTBP09497 229 aa14.04□□□□□ -0.16
CDK7-208ENST00000512687 FAAP100Q0VG06 881 aa14.04□□□□□ -0.16
CDK7-208ENST00000512687 LRIT3Q3SXY7 679 aa14.04□□□□□ -0.16
CDK7-208ENST00000512687 GNASQ5JWF2 1037 aa14.04□□□□□ -0.16
CDK7-208ENST00000512687 ANKRD33Q7Z3H0 272 aa14.04□□□□□ -0.16
CDK7-208ENST00000512687 MB21D2Q8IYB1 491 aaPredicted RBP14.04□□□□□ -0.16
CDK7-208ENST00000512687 NUP133Q8WUM0 1156 aa14.04□□□□□ -0.16
CDK7-208ENST00000512687 LBHD1Q9BQE6 289 aaPredicted RBP14.04□□□□□ -0.16
CDK7-208ENST00000512687 LSG1Q9H089 658 aaKnown RBP14.04□□□□□ -0.16
CDK7-208ENST00000512687 COL20A1Q9P218 1284 aa14.04□□□□□ -0.16
CDK7-208ENST00000512687 ADD3Q9UEY8 706 aaKnown RBP14.04□□□□□ -0.16
CDK7-208ENST00000512687 TRIP12Q14669 1992 aaPredicted RBP14.03□□□□□ -0.16
CDK7-208ENST00000512687 OPLAHO14841 1288 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 PPP1R11O60927 126 aaPredicted RBP14.03□□□□□ -0.16
CDK7-208ENST00000512687 EDNRBP24530 442 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 CDK7P50613 346 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 TRDNQ13061 729 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 C9orf50Q5SZB4 431 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 IQSEC1Q6DN90 963 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 NOL8Q76FK4 1167 aaKnown RBP14.03□□□□□ -0.16
CDK7-208ENST00000512687 PCSK9Q8NBP7 692 aaKnown RBP14.03□□□□□ -0.16
CDK7-208ENST00000512687 ESYT1Q9BSJ8 1104 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 SPC25Q9HBM1 224 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 VAT1LQ9HCJ6 419 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 PNMA2Q9UL42 364 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 ELP1O95163 1332 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 ABCB11O95342 1321 aa14.03□□□□□ -0.16
CDK7-208ENST00000512687 LOC102724159A0A0B4J2E5 919 aa14.02□□□□□ -0.17
CDK7-208ENST00000512687 RBM47A0AV96 593 aaKnown RBP14.02□□□□□ -0.17
CDK7-208ENST00000512687 PALM3A6NDB9 673 aaPredicted RBP14.02□□□□□ -0.17
CDK7-208ENST00000512687 KLRF2D3W0D1 207 aa14.02□□□□□ -0.17
CDK7-208ENST00000512687 IFIT3O14879 490 aaKnown RBP14.02□□□□□ -0.17
CDK7-208ENST00000512687 KIAA0355O15063 1070 aa14.02□□□□□ -0.17
CDK7-208ENST00000512687 DYNC1LI2O43237 492 aaPredicted RBP14.02□□□□□ -0.17
CDK7-208ENST00000512687 DHX16O60231 1041 aaKnown RBP14.02□□□□□ -0.17
CDK7-208ENST00000512687 GRM4Q14833 912 aa14.02□□□□□ -0.17
CDK7-208ENST00000512687 PWP2Q15269 919 aaKnown RBP14.02□□□□□ -0.17
CDK7-208ENST00000512687 FSCN1Q16658 493 aaKnown RBP14.02□□□□□ -0.17
CDK7-208ENST00000512687 CXCL17Q6UXB2 119 aa14.02□□□□□ -0.17
CDK7-208ENST00000512687 KIAA1211Q6ZU35 1233 aa14.02□□□□□ -0.17
CDK7-208ENST00000512687 CENPQQ7L2Z9 268 aaPredicted RBP14.02□□□□□ -0.17
CDK7-208ENST00000512687 FBXO11Q86XK2 927 aa14.02□□□□□ -0.17
CDK7-208ENST00000512687 NCOA7Q8NI08 942 aa14.02□□□□□ -0.17
CDK7-208ENST00000512687 MTMR8Q96EF0 704 aa14.02□□□□□ -0.17
CDK7-208ENST00000512687 GLT1D1Q96MS3 346 aa14.02□□□□□ -0.17
CDK7-208ENST00000512687 GPHNQ9NQX3 736 aaPredicted RBP14.02□□□□□ -0.17
CDK7-208ENST00000512687 COL6A3P12111 3177 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 GRIN2DO15399 1336 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 A0A0U1RQG5 324 aaPredicted RBP14.01□□□□□ -0.17
CDK7-208ENST00000512687 ARVCFO00192 962 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 EPHB4P54760 987 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 WTAPQ15007 396 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 SHHQ15465 462 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 DUSP28Q4G0W2 176 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 Q7L0L9 218 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 RALYLQ86SE5 291 aaKnown RBP14.01□□□□□ -0.17
CDK7-208ENST00000512687 FAM126BQ8IXS8 530 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 RGS22Q8NE09 1264 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 DNERQ8NFT8 737 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 SYTL5Q8TDW5 730 aaPredicted RBP14.01□□□□□ -0.17
CDK7-208ENST00000512687 TOX2Q96NM4 488 aa14.01□□□□□ -0.17
CDK7-208ENST00000512687 TAAR1Q96RJ0 339 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms