RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 MB21D1Q8N884 522 aa8.64□□□□□ -1.03
USP46-208ENST00000512656 LPAR1Q92633 364 aa8.64□□□□□ -1.03
USP46-208ENST00000512656 CCDC17Q96LX7 622 aa8.64□□□□□ -1.03
USP46-208ENST00000512656 TANGO6Q9C0B7 1094 aa8.64□□□□□ -1.03
USP46-208ENST00000512656 BCL11AQ9H165 835 aa8.64□□□□□ -1.03
USP46-208ENST00000512656 ARHGEF10LQ9HCE6 1279 aa8.64□□□□□ -1.03
USP46-208ENST00000512656 DCP1AQ9NPI6 582 aaPredicted RBP8.64□□□□□ -1.03
USP46-208ENST00000512656 SLC5A4Q9NY91 659 aa8.64□□□□□ -1.03
USP46-208ENST00000512656 COG6Q9Y2V7 657 aa8.64□□□□□ -1.03
USP46-208ENST00000512656 A0A0C4DFX4 3053 aa8.64□□□□□ -1.03
USP46-208ENST00000512656 MYO5AQ9Y4I1 1855 aaKnown RBP8.64□□□□□ -1.03
USP46-208ENST00000512656 CNMDO75829 334 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 MBD4O95243 580 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 HOXC6P09630 235 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 GUCY1A2P33402 732 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 BMP8BP34820 402 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 ADD2P35612 726 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 GRB14Q14449 540 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 CCL14Q16627 93 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 SIRT2Q8IXJ6 389 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 VWA5B2Q8N398 1253 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 LCORLQ8N3X6 602 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 SDR42E1Q8WUS8 393 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 GDF15Q99988 308 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 LRRCC1Q9C099 1032 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 BOLA2Q9H3K6 86 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 ARMT1Q9H993 441 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 PRM3Q9NNZ6 103 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 BTBD7Q9P203 1132 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 STAP2Q9UGK3 403 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 RCAN3Q9UKA8 241 aa8.63□□□□□ -1.03
USP46-208ENST00000512656 ZMYND8Q9ULU4 1186 aaPredicted RBP8.63□□□□□ -1.03
USP46-208ENST00000512656 A0A1W2PRU2 124 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 CCND3P30281 292 aaPredicted RBP8.62□□□□□ -1.03
USP46-208ENST00000512656 ICA1Q05084 483 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 UBE3CQ15386 1083 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 WDR44Q5JSH3 913 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 DPP9Q86TI2 863 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 SHCBP1Q8NEM2 672 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 GPATCH3Q96I76 525 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 HAUS7Q99871 368 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 MROH8Q9H579 483 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 TMX2Q9Y320 296 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 DNAH12Q6ZR08 3092 aa8.62□□□□□ -1.03
USP46-208ENST00000512656 LAMA3Q16787 3333 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 A0A1W2PRG0 241 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 CDC14CA4D256 554 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 WDR46O15213 610 aaKnown RBP8.61□□□□□ -1.03
USP46-208ENST00000512656 TRAK2O60296 914 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 FLOT1O75955 427 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 CYP2D6P10635 497 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 COL6A1P12109 1028 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 CNGA1P29973 690 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 CDK8P49336 464 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 CLN3Q13286 438 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 C12orf60Q5U649 245 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 OLFML2BQ68BL8 750 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 ABRAQ8N0Z2 381 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 SLC44A5Q8NCS7 719 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 DYNLL2Q96FJ2 89 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 MOV10L1Q9BXT6 1211 aaKnown RBP8.61□□□□□ -1.03
USP46-208ENST00000512656 SPATC1LQ9H0A9 340 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 VCPKMTQ9H867 229 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 KANSL2Q9H9L4 492 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 DDX20Q9UHI6 824 aaKnown RBP8.61□□□□□ -1.03
USP46-208ENST00000512656 SLC4A4Q9Y6R1 1079 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 PLXNB2O15031 1838 aa8.61□□□□□ -1.03
USP46-208ENST00000512656 PFASO15067 1338 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 USP17L12C9JPN9 530 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 USP17L21D6R901 530 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 PRKAB2O43741 272 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 SLC25A27O95847 323 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 AKR1B1P15121 316 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 ERCC3P19447 782 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 ADORA2AP29274 412 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 CYP2C19P33261 490 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 COPB2P35606 906 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 MAGEA10P43363 369 aaPredicted RBP8.6□□□□□ -1.03
USP46-208ENST00000512656 KCNMA1Q12791 1236 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 PLS1Q14651 629 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 LRRFIP1Q32MZ4 808 aaKnown RBP8.6□□□□□ -1.03
USP46-208ENST00000512656 RNFT1Q5M7Z0 435 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 C16orf86Q6ZW13 317 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 PRICKLE2Q7Z3G6 844 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 NCAPG2Q86XI2 1143 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 TDHQ8IZJ6 230 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 ARRDC4Q8NCT1 418 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 UBE2OQ9C0C9 1292 aaKnown RBP8.6□□□□□ -1.03
USP46-208ENST00000512656 SENP6Q9GZR1 1112 aaPredicted RBP8.6□□□□□ -1.03
USP46-208ENST00000512656 ECHDC1Q9NTX5 307 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 FLRT1Q9NZU1 646 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 ARPP21Q9UBL0 812 aaPredicted RBP8.6□□□□□ -1.03
USP46-208ENST00000512656 PCDHB11Q9Y5F2 797 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 NAV1Q8NEY1 1877 aa8.6□□□□□ -1.03
USP46-208ENST00000512656 MEN1O00255 615 aa8.59□□□□□ -1.03
USP46-208ENST00000512656 DNM1LO00429 736 aa8.59□□□□□ -1.03
USP46-208ENST00000512656 FCER1AP12319 257 aa8.59□□□□□ -1.03
USP46-208ENST00000512656 CYBAP13498 195 aa8.59□□□□□ -1.03
USP46-208ENST00000512656 SYN1P17600 705 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms