RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 KRT40Q6A162 431 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 FAM173BQ6P4H8 233 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 UBE2Q1Q7Z7E8 422 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 ZNF654Q8IZM8 581 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 FAM177A1Q8N128 213 aaPredicted RBP10.85□□□□□ -0.67
MSH3-203ENST00000512531 SH3TC2Q8TF17 1288 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 NUP133Q8WUM0 1156 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 NSUN4Q96CB9 384 aaKnown RBP10.85□□□□□ -0.67
MSH3-203ENST00000512531 TRIM47Q96LD4 638 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 TIGD1Q96MW7 591 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 ZSCAN10Q96SZ4 725 aaPredicted RBP10.85□□□□□ -0.67
MSH3-203ENST00000512531 PYM1Q9BRP8 204 aaKnown RBP10.85□□□□□ -0.67
MSH3-203ENST00000512531 ARHGAP39Q9C0H5 1083 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 IQSEC3Q9UPP2 1182 aaPredicted RBP10.85□□□□□ -0.67
MSH3-203ENST00000512531 ZKSCAN5Q9Y2L8 839 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 SLC45A1Q9Y2W3 748 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 SMTNL1A8MU46 457 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 H0YGN5 161 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 PDHXO00330 501 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 NR1I2O75469 434 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 ADCY5O95622 1261 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 BCRP11274 1271 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 CMA1P23946 247 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 GRK4P32298 578 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 ZNF165P49910 485 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 MOGSQ13724 837 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 CAMK4Q16566 473 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 KANK3Q6NY19 840 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 DRC7Q8IY82 874 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 FANCBQ8NB91 859 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 LINC00301Q8NCQ3 95 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 RAET1EQ8TD07 263 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 PGBD1Q96JS3 809 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 PARK7Q99497 189 aaKnown RBP10.84□□□□□ -0.67
MSH3-203ENST00000512531 RIOK1Q9BRS2 568 aaKnown RBP10.84□□□□□ -0.67
MSH3-203ENST00000512531 FUCA2Q9BTY2 467 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 HTATIP2Q9BUP3 242 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 NBPF3Q9H094 633 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 DACH1Q9UI36 760 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 RABGEF1Q9UJ41 708 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 MYO5AQ9Y4I1 1855 aaKnown RBP10.84□□□□□ -0.67
MSH3-203ENST00000512531 TNKSO95271 1327 aa10.84□□□□□ -0.67
MSH3-203ENST00000512531 A0A1W2PPC1 479 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 ZNF500O60304 480 aaPredicted RBP10.83□□□□□ -0.68
MSH3-203ENST00000512531 CUTAO60888 179 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 POLR3DP05423 398 aaPredicted RBP10.83□□□□□ -0.68
MSH3-203ENST00000512531 CFHP08603 1231 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 U2AF2P26368 475 aaKnown RBP eCLIP10.83□□□□□ -0.68
MSH3-203ENST00000512531 INPP5BP32019 993 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 ADD1P35611 737 aaKnown RBP10.83□□□□□ -0.68
MSH3-203ENST00000512531 UBXN2AP68543 259 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 MAP3K10Q02779 954 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 MECOMQ03112 1051 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 SLC39A14Q15043 492 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 ANO6Q4KMQ2 910 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 CDC42EP5Q6NZY7 148 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 FASTKD5Q7L8L6 764 aaKnown RBP10.83□□□□□ -0.68
MSH3-203ENST00000512531 SHISA4Q96DD7 197 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 LZTS2Q9BRK4 669 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 IDI2Q9BXS1 227 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 DAGLAQ9Y4D2 1042 aa10.83□□□□□ -0.68
MSH3-203ENST00000512531 MAFBQ9Y5Q3 323 aaPredicted RBP10.83□□□□□ -0.68
MSH3-203ENST00000512531 TSPY2A6NKD2 308 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 PRKAB2O43741 272 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 NEMFO60524 1076 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 ENTPD3O75355 529 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 MMP1P03956 469 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 FGRP09769 529 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 CALML3P27482 149 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 CTGFP29279 349 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 SYKP43405 635 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 FCGRTP55899 365 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 MIGA2Q7L4E1 593 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 NOSTRINQ8IVI9 506 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 CKAP2LQ8IYA6 745 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 ELOA2Q8IYF1 753 aaPredicted RBP10.82□□□□□ -0.68
MSH3-203ENST00000512531 ZNF444Q8N0Y2 327 aaPredicted RBP10.82□□□□□ -0.68
MSH3-203ENST00000512531 CRACR2BQ8N4Y2 399 aaPredicted RBP10.82□□□□□ -0.68
MSH3-203ENST00000512531 SDR42E1Q8WUS8 393 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 FAM163AQ96GL9 167 aaPredicted RBP10.82□□□□□ -0.68
MSH3-203ENST00000512531 MAP3K14Q99558 947 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 KAT14Q9H8E8 782 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 MKNK2Q9HBH9 465 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.82□□□□□ -0.68
MSH3-203ENST00000512531 AATFQ9NY61 560 aaKnown RBP eCLIP10.82□□□□□ -0.68
MSH3-203ENST00000512531 CPA4Q9UI42 421 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 PCDHA7Q9UN72 937 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 NR2E3Q9Y5X4 410 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 MRVI1Q9Y6F6 885 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 MORC2Q9Y6X9 1032 aaPredicted RBP10.82□□□□□ -0.68
MSH3-203ENST00000512531 MYPNQ86TC9 1320 aa10.82□□□□□ -0.68
MSH3-203ENST00000512531 ATRNL1Q5VV63 1379 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 A0A0G2JLL6 359 aaPredicted RBP10.81□□□□□ -0.68
MSH3-203ENST00000512531 PHF20L1A8MW92 1017 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 USP17L12C9JPN9 530 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 USP17L21D6R901 530 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 PRPF3O43395 683 aaKnown RBP10.81□□□□□ -0.68
MSH3-203ENST00000512531 KRT2P35908 639 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 TERF1P54274 439 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 PPP4CP60510 307 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms