RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 SRGAP2O75044 1071 aa13.27□□□□□ -0.29
PRDM16-207ENST00000512462 STAT3P40763 770 aa13.27□□□□□ -0.29
PRDM16-207ENST00000512462 KRT83P78385 493 aa13.27□□□□□ -0.29
PRDM16-207ENST00000512462 SPATA31A5Q5VU36 1347 aa13.27□□□□□ -0.29
PRDM16-207ENST00000512462 MAATS1Q7Z4T9 603 aa13.27□□□□□ -0.29
PRDM16-207ENST00000512462 SPATA31A7Q8IWB4 1347 aa13.27□□□□□ -0.29
PRDM16-207ENST00000512462 ST7Q9NRC1 585 aa13.27□□□□□ -0.29
PRDM16-207ENST00000512462 EPN1Q9Y6I3 576 aaPredicted RBP13.27□□□□□ -0.29
PRDM16-207ENST00000512462 GH2P01242 217 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 ALAS1P13196 640 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 AOC3Q16853 763 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 TMTC1Q8IUR5 882 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 CCDC66A2RUB6 948 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 H0YHG0 523 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 LONP1P36776 959 aaKnown RBP13.26□□□□□ -0.29
PRDM16-207ENST00000512462 POLR2FP61218 127 aaKnown RBP13.26□□□□□ -0.29
PRDM16-207ENST00000512462 ABCB5Q2M3G0 1257 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 SARM1Q6SZW1 724 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 VPS36Q86VN1 386 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 LARP4BQ92615 738 aaKnown RBP13.26□□□□□ -0.29
PRDM16-207ENST00000512462 BCL9O00512 1426 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 CCDC169A6NNP5 214 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 BBOX1O75936 387 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 TTLL1O95922 423 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 ABCB4P21439 1286 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 ALDH1B1P30837 517 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.26□□□□□ -0.29
PRDM16-207ENST00000512462 DGKHQ86XP1 1220 aa13.26□□□□□ -0.29
PRDM16-207ENST00000512462 IFIH1Q9BYX4 1025 aaKnown RBP13.26□□□□□ -0.29
PRDM16-207ENST00000512462 E9PMD0 336 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 HSPA1LP34931 641 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 FBXO33Q7Z6M2 555 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 KLHL7Q8IXQ5 586 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 PIGOQ8TEQ8 1089 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 LAMB4A4D0S4 1761 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 WNT7AO00755 349 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 BACH1O14867 736 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 FAM26FQ5R3K3 315 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 TBC1D16Q8TBP0 767 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 AGXT2Q9BYV1 514 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 PANK4Q9NVE7 773 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 DNM3Q9UQ16 869 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
PRDM16-207ENST00000512462 ABCA3Q99758 1704 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 CETN3O15182 167 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 STX10O60499 249 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 CDC25BP30305 580 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 HS2ST1Q7LGA3 356 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 NLGN1Q8N2Q7 840 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 TRIML1Q8N9V2 468 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 TCHPQ9BT92 498 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 LSM14BQ9BX40 385 aaKnown RBP13.25□□□□□ -0.29
PRDM16-207ENST00000512462 OGFRQ9NZT2 677 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 TRIM10Q9UDY6 481 aa13.25□□□□□ -0.29
PRDM16-207ENST00000512462 TFRCP02786 760 aaKnown RBP13.24□□□□□ -0.29
PRDM16-207ENST00000512462 NFIAQ12857 509 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 DPH6Q7L8W6 267 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 FBXO11Q86XK2 927 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 CEP112Q8N8E3 955 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 CHP1Q99653 195 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 ZCCHC17Q9NP64 241 aaKnown RBP13.24□□□□□ -0.29
PRDM16-207ENST00000512462 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
PRDM16-207ENST00000512462 FAM205AQ6ZU69 1335 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 ATP2C2O75185 946 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
PRDM16-207ENST00000512462 KRT26Q7Z3Y9 468 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 MYOCDQ8IZQ8 938 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 CERKQ8TCT0 537 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 PHF20Q9BVI0 1012 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 DAGLAQ9Y4D2 1042 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 ARFGEF2Q9Y6D5 1785 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 TNS2Q63HR2 1409 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 GOLGA6L10A6NI86 522 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 RASA1P20936 1047 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 ERCC5P28715 1186 aaPredicted RBP13.24□□□□□ -0.29
PRDM16-207ENST00000512462 FXR1P51114 621 aaKnown RBP eCLIP13.24□□□□□ -0.29
PRDM16-207ENST00000512462 NAA35Q5VZE5 725 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 IQCEQ6IPM2 695 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 KSR1Q8IVT5 923 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 SCLT1Q96NL6 688 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.24□□□□□ -0.29
PRDM16-207ENST00000512462 STK32BQ9NY57 414 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 HDAC6Q9UBN7 1215 aa13.24□□□□□ -0.29
PRDM16-207ENST00000512462 SRCAPQ6ZRS2 3230 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 CNTNAP5Q8WYK1 1306 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 STK36Q9NRP7 1315 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 TESPA1A2RU30 521 aaPredicted RBP13.23□□□□□ -0.29
PRDM16-207ENST00000512462 H7C1D1 291 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 CAPN2P17655 700 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 ZNF658Q5TYW1 1059 aaPredicted RBP13.23□□□□□ -0.29
PRDM16-207ENST00000512462 GBP3Q9H0R5 595 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 POTEB3A0JP26 581 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 POTECB2RU33 542 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 PDE6BP35913 854 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 RASSF7Q02833 373 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 KLHL30Q0D2K2 578 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 POTEBQ6S5H4 581 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 FLT1P17948 1338 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 RIC1Q4ADV7 1423 aa13.23□□□□□ -0.29
PRDM16-207ENST00000512462 A0A087X0B3 334 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms