RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 GPNMBQ14956 572 aa9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 CLUL1Q15846 466 aa9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 EPC2Q52LR7 807 aa9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 CLEC10AQ8IUN9 316 aa9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 POLR3EQ9NVU0 708 aa9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 INSL6Q9Y581 213 aa9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 FAM208BQ5VWN6 2430 aa9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 GREB1LQ9C091 1923 aaPredicted RBP9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 BAZ2AQ9UIF9 1905 aaKnown RBP9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 EFCAB14O75071 495 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 CXCL10P02778 98 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 CYP2E1P05181 493 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 UBTFL1P0CB47 393 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 CYP7A1P22680 504 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 PURAQ00577 322 aaKnown RBP9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 GPM6BQ13491 265 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 FRMD5Q7Z6J6 570 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 ANKRD35Q8N283 1001 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 AFAP1L1Q8TED9 768 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 SNRKQ9NRH2 765 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 CD207Q9UJ71 328 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 USP24Q9UPU5 2620 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 MYO10Q9HD67 2058 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 MYH4Q9Y623 1939 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 TBX10O75333 385 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 PARNO95453 639 aaKnown RBP9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 POLR3DP05423 398 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 HTRA4P83105 476 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 PTPN11Q06124 597 aaPredicted RBP9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 PUM1Q14671 1186 aaKnown RBP eCLIP9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 FAM47CQ5HY64 1035 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 IQSEC1Q6DN90 963 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 NFRKBQ6P4R8 1299 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 MRPL50Q8N5N7 158 aaKnown RBP9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 FAM133AQ8N9E0 248 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 MIGA1Q8NAN2 632 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 CAGE1Q8TC20 777 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 SLF1Q9BQI6 1058 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 FBXO40Q9UH90 709 aa9.37□□□□□ -0.91
DEPDC1B-205ENST00000512078 ASB14A6NK59 587 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 EYA4O95677 639 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 EVX2Q03828 476 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 HYAL1Q12794 435 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 TCTN1Q2MV58 587 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 FAM83BQ5T0W9 1011 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 TAPT1Q6NXT6 567 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 FAM117BQ6P1L5 589 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 CCDC155Q8N6L0 562 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 CHST13Q8NET6 341 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 RIPOR3Q96MK2 946 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 MTG1Q9BT17 334 aaPredicted RBP9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 SWAP70Q9UH65 585 aa9.36□□□□□ -0.91
DEPDC1B-205ENST00000512078 OTOGLQ3ZCN5 2332 aa9.35□□□□□ -0.91
DEPDC1B-205ENST00000512078 ATXN8OSP0DMR3 200 aa9.35□□□□□ -0.91
DEPDC1B-205ENST00000512078 AKR1B1P15121 316 aa9.35□□□□□ -0.91
DEPDC1B-205ENST00000512078 CNTN2Q02246 1040 aa9.35□□□□□ -0.91
DEPDC1B-205ENST00000512078 ST3GAL2Q16842 350 aa9.35□□□□□ -0.91
DEPDC1B-205ENST00000512078 TMEM63BQ5T3F8 832 aa9.35□□□□□ -0.91
DEPDC1B-205ENST00000512078 COL26A1Q96A83 441 aa9.35□□□□□ -0.91
DEPDC1B-205ENST00000512078 MSLNLQ96KJ4 702 aa9.35□□□□□ -0.91
DEPDC1B-205ENST00000512078 GOPCQ9HD26 462 aa9.35□□□□□ -0.91
DEPDC1B-205ENST00000512078 PIH1D3Q9NQM4 214 aaKnown RBP9.35□□□□□ -0.91
DEPDC1B-205ENST00000512078 PDGFCQ9NRA1 345 aa9.35□□□□□ -0.91
DEPDC1B-205ENST00000512078 FASNP49327 2511 aaKnown RBP9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 NBNO60934 754 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 PDGFBP01127 241 aaPredicted RBP9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 MYL3P08590 195 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 EEF2P13639 858 aaKnown RBP9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 SELPP16109 830 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 ICAM3P32942 547 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 CPT1AP50416 773 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 RBL2Q08999 1139 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 COL9A2Q14055 689 aaPredicted RBP9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 IKBKEQ14164 716 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 TTC39AQ5SRH9 613 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 LRRC8DQ7L1W4 858 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 FBXO11Q86XK2 927 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 TMEM192Q8IY95 271 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 CPXCR1Q8N123 301 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 LMAN2LQ9H0V9 348 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 HDAC5Q9UQL6 1122 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 NOD1Q9Y239 953 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 FANCMQ8IYD8 2048 aa9.34□□□□□ -0.91
DEPDC1B-205ENST00000512078 WDR87Q6ZQQ6 2873 aa9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 SLC4A3P48751 1232 aa9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 MKRN4PQ13434 485 aaPredicted RBP9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 PTPN21Q16825 1174 aa9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 DUSP28Q4G0W2 176 aa9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 TMED8Q6PL24 325 aaPredicted RBP9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 FBXO16Q8IX29 292 aaPredicted RBP9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 TMEM105Q8N8V8 129 aa9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 SMRP1Q8NCR6 262 aa9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 ZNF512BQ96KM6 892 aaPredicted RBP9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 CCDC17Q96LX7 622 aa9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 RIOK1Q9BRS2 568 aaKnown RBP9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 PRKRIP1Q9H875 184 aaPredicted RBP9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 VTA1Q9NP79 307 aa9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 GPHNQ9NQX3 736 aaPredicted RBP9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 DLL3Q9NYJ7 618 aa9.33□□□□□ -0.92
DEPDC1B-205ENST00000512078 USP17L12C9JPN9 530 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms