RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 TAPT1Q6NXT6 567 aa19.19■□□□□ 0.66
DDX41-213ENST00000512027 CATIPQ7Z7H3 387 aa19.19■□□□□ 0.66
DDX41-213ENST00000512027 MTMR8Q96EF0 704 aa19.19■□□□□ 0.66
DDX41-213ENST00000512027 TCEANC2Q96MN5 208 aa19.19■□□□□ 0.66
DDX41-213ENST00000512027 COL20A1Q9P218 1284 aa19.19■□□□□ 0.66
DDX41-213ENST00000512027 PNMA2Q9UL42 364 aa19.19■□□□□ 0.66
DDX41-213ENST00000512027 OPLAHO14841 1288 aa19.18■□□□□ 0.66
DDX41-213ENST00000512027 SMPD1P17405 629 aa19.18■□□□□ 0.66
DDX41-213ENST00000512027 BEX3Q00994 111 aa19.18■□□□□ 0.66
DDX41-213ENST00000512027 TNFAIP2Q03169 654 aa19.18■□□□□ 0.66
DDX41-213ENST00000512027 TRIM60Q495X7 471 aa19.18■□□□□ 0.66
DDX41-213ENST00000512027 NFXL1Q6ZNB6 911 aa19.18■□□□□ 0.66
DDX41-213ENST00000512027 NOL8Q76FK4 1167 aaKnown RBP19.18■□□□□ 0.66
DDX41-213ENST00000512027 KLHDC9Q8NEP7 349 aa19.18■□□□□ 0.66
DDX41-213ENST00000512027 MORC4Q8TE76 937 aa19.18■□□□□ 0.66
DDX41-213ENST00000512027 PRO3102Q9H379 93 aa19.18■□□□□ 0.66
DDX41-213ENST00000512027 PPP4R2Q9NY27 417 aa19.18■□□□□ 0.66
DDX41-213ENST00000512027 ADD3Q9UEY8 706 aaKnown RBP19.18■□□□□ 0.66
DDX41-213ENST00000512027 ZBTB5O15062 677 aa19.17■□□□□ 0.66
DDX41-213ENST00000512027 CTAGE5O15320 804 aa19.17■□□□□ 0.66
DDX41-213ENST00000512027 ACLYP53396 1101 aa19.17■□□□□ 0.66
DDX41-213ENST00000512027 KCNA10Q16322 511 aa19.17■□□□□ 0.66
DDX41-213ENST00000512027 CCSAPQ6IQ19 270 aaPredicted RBP19.17■□□□□ 0.66
DDX41-213ENST00000512027 SYTL5Q8TDW5 730 aaPredicted RBP19.17■□□□□ 0.66
DDX41-213ENST00000512027 TAAR1Q96RJ0 339 aa19.17■□□□□ 0.66
DDX41-213ENST00000512027 AMNQ9BXJ7 453 aa19.17■□□□□ 0.66
DDX41-213ENST00000512027 UPF3AQ9H1J1 476 aaKnown RBP19.17■□□□□ 0.66
DDX41-213ENST00000512027 RIOX1Q9H6W3 641 aa19.17■□□□□ 0.66
DDX41-213ENST00000512027 CCDC69A6NI79 296 aa19.16■□□□□ 0.66
DDX41-213ENST00000512027 PLEKHA8P1O95397 391 aa19.16■□□□□ 0.66
DDX41-213ENST00000512027 CFBP00751 764 aa19.16■□□□□ 0.66
DDX41-213ENST00000512027 CENPBP07199 599 aaPredicted RBP19.16■□□□□ 0.66
DDX41-213ENST00000512027 MAGEA10P43363 369 aaPredicted RBP19.16■□□□□ 0.66
DDX41-213ENST00000512027 GJA9P57773 515 aa19.16■□□□□ 0.66
DDX41-213ENST00000512027 RNF20Q5VTR2 975 aa19.16■□□□□ 0.66
DDX41-213ENST00000512027 TLK2Q86UE8 772 aa19.16■□□□□ 0.66
DDX41-213ENST00000512027 CMTR1Q8N1G2 835 aaKnown RBP19.16■□□□□ 0.66
DDX41-213ENST00000512027 TMEM87BQ96K49 555 aa19.16■□□□□ 0.66
DDX41-213ENST00000512027 NEK1Q96PY6 1258 aa19.16■□□□□ 0.66
DDX41-213ENST00000512027 VTA1Q9NP79 307 aa19.16■□□□□ 0.66
DDX41-213ENST00000512027 GNEQ9Y223 722 aaKnown RBP19.16■□□□□ 0.66
DDX41-213ENST00000512027 MRPL11Q9Y3B7 192 aaKnown RBP19.16■□□□□ 0.66
DDX41-213ENST00000512027 KIAA1217Q5T5P2 1943 aa19.15■□□□□ 0.66
DDX41-213ENST00000512027 DDAH1O94760 285 aa19.15■□□□□ 0.66
DDX41-213ENST00000512027 EDNRBP24530 442 aa19.15■□□□□ 0.66
DDX41-213ENST00000512027 PDE4DQ08499 809 aa19.15■□□□□ 0.66
DDX41-213ENST00000512027 SNX17Q15036 470 aa19.15■□□□□ 0.66
DDX41-213ENST00000512027 RGS22Q8NE09 1264 aa19.15■□□□□ 0.66
DDX41-213ENST00000512027 GDF15Q99988 308 aa19.15■□□□□ 0.66
DDX41-213ENST00000512027 PCDHA1Q9Y5I3 950 aa19.15■□□□□ 0.66
DDX41-213ENST00000512027 DYNC1LI2O43237 492 aaPredicted RBP19.14■□□□□ 0.65
DDX41-213ENST00000512027 ASGR1P07306 291 aa19.14■□□□□ 0.65
DDX41-213ENST00000512027 CPA1P15085 419 aa19.14■□□□□ 0.65
DDX41-213ENST00000512027 CST5P28325 142 aaPredicted RBP19.14■□□□□ 0.65
DDX41-213ENST00000512027 MDM2Q00987 491 aaPredicted RBP19.14■□□□□ 0.65
DDX41-213ENST00000512027 GNASQ5JWF2 1037 aa19.14■□□□□ 0.65
DDX41-213ENST00000512027 SH3RF1Q7Z6J0 888 aa19.14■□□□□ 0.65
DDX41-213ENST00000512027 DNERQ8NFT8 737 aa19.14■□□□□ 0.65
DDX41-213ENST00000512027 CTCFLQ8NI51 663 aaPredicted RBP19.14■□□□□ 0.65
DDX41-213ENST00000512027 TSEN34Q9BSV6 310 aaKnown RBP19.14■□□□□ 0.65
DDX41-213ENST00000512027 MTA3Q9BTC8 594 aa19.14■□□□□ 0.65
DDX41-213ENST00000512027 SPC25Q9HBM1 224 aa19.14■□□□□ 0.65
DDX41-213ENST00000512027 PRDM5Q9NQX1 630 aaPredicted RBP19.14■□□□□ 0.65
DDX41-213ENST00000512027 EIF2AK2P19525 551 aaKnown RBP19.13■□□□□ 0.65
DDX41-213ENST00000512027 HOXA13P31271 388 aaPredicted RBP19.13■□□□□ 0.65
DDX41-213ENST00000512027 TLE2Q04725 743 aa19.13■□□□□ 0.65
DDX41-213ENST00000512027 MCF2L2Q86YR7 1114 aa19.13■□□□□ 0.65
DDX41-213ENST00000512027 WDR11Q9BZH6 1224 aa19.13■□□□□ 0.65
DDX41-213ENST00000512027 STARD7Q9NQZ5 370 aa19.13■□□□□ 0.65
DDX41-213ENST00000512027 PDLIM7Q9NR12 457 aa19.13■□□□□ 0.65
DDX41-213ENST00000512027 PNMA6FA0A0J9YX94 578 aa19.12■□□□□ 0.65
DDX41-213ENST00000512027 hCG_1642624A0A1W2PR95 340 aa19.12■□□□□ 0.65
DDX41-213ENST00000512027 MOXD2PA6NHM9 499 aa19.12■□□□□ 0.65
DDX41-213ENST00000512027 PQBP1O60828 265 aaKnown RBP19.12■□□□□ 0.65
DDX41-213ENST00000512027 LIFRP42702 1097 aa19.12■□□□□ 0.65
DDX41-213ENST00000512027 FXR1P51114 621 aaKnown RBP eCLIP19.12■□□□□ 0.65
DDX41-213ENST00000512027 HSD17B4P51659 736 aa19.12■□□□□ 0.65
DDX41-213ENST00000512027 EXOSC10Q01780 885 aaKnown RBP19.12■□□□□ 0.65
DDX41-213ENST00000512027 IQSEC1Q6DN90 963 aa19.12■□□□□ 0.65
DDX41-213ENST00000512027 MICU3Q86XE3 530 aa19.12■□□□□ 0.65
DDX41-213ENST00000512027 SRBD1Q8N5C6 995 aaKnown RBP19.12■□□□□ 0.65
DDX41-213ENST00000512027 COPS5Q92905 334 aa19.12■□□□□ 0.65
DDX41-213ENST00000512027 RMDN3Q96TC7 470 aa19.12■□□□□ 0.65
DDX41-213ENST00000512027 SLC12A7Q9Y666 1083 aa19.12■□□□□ 0.65
DDX41-213ENST00000512027 LOC102724159A0A0B4J2E5 919 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 RBM47A0AV96 593 aaKnown RBP19.11■□□□□ 0.65
DDX41-213ENST00000512027 ARIH2O95376 493 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 KIF5BP33176 963 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 PWP2Q15269 919 aaKnown RBP19.11■□□□□ 0.65
DDX41-213ENST00000512027 FSCN1Q16658 493 aaKnown RBP19.11■□□□□ 0.65
DDX41-213ENST00000512027 TSGA10IPQ3SY00 556 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 DUSP28Q4G0W2 176 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 CXCL17Q6UXB2 119 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 CCDC82Q8N4S0 544 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 PCSK9Q8NBP7 692 aaKnown RBP19.11■□□□□ 0.65
DDX41-213ENST00000512027 VTI1AQ96AJ9 217 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 MAP3K14Q99558 947 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 SPZ1Q9BXG8 430 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 AP5M1Q9H0R1 490 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 BRPF3Q9ULD4 1205 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms