RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 USP6NLQ92738 828 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 SYMPKQ92797 1274 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 TRIM11Q96F44 468 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 SLC7A5P2Q9GIP4 190 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 ATP8A2Q9NTI2 1148 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 RRN3Q9NYV6 651 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 PCSK1NQ9UHG2 260 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 LY75O60449 1722 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 C5P01031 1676 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 ADAMTS7Q9UKP4 1686 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 FAM177BA6PVY3 158 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 SPTLC2O15270 562 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 PDE8AO60658 829 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 GNA15P30679 374 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 EXOSC9Q06265 439 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 CACNB2Q08289 660 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 TRAPPC3LQ5T215 181 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 C6orf118Q5T5N4 469 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 PDCD7Q8N8D1 485 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 ANKRD49Q8WVL7 239 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 RSAD2Q8WXG1 361 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 ANAPC16Q96DE5 110 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 KIF2CQ99661 725 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 BARD1Q99728 777 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 HAUS7Q99871 368 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 MRPL9Q9BYD2 267 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 KIAA1586Q9HCI6 787 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 ANKEF1Q9NU02 776 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 SNCAIPQ9Y6H5 919 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 RREB1Q92766 1687 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 PNMA6FA0A0J9YX94 578 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 KIF3CO14782 793 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 C4BP0C0L5 1744 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 DGKGP49619 791 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 GABREP78334 506 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 PRKG2Q13237 762 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 PROSER3Q2NL68 480 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 MAP7D1Q3KQU3 841 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 RRP12Q5JTH9 1297 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 TOGARAM2Q6ZUX3 1019 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 TBC1D1Q86TI0 1168 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 ZBTB46Q86UZ6 589 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 NUTM1Q86Y26 1132 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 PXYLP1Q8TE99 480 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 OCEL1Q9H607 264 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 CAAP1Q9H8G2 361 aa5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 ZNHIT6Q9NWK9 470 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 TSR3Q9UJK0 312 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-208ENST00000511955 SIPA1L3O60292 1781 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 KIF16BQ96L93 1317 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 CCDC196A0A1B0GTZ2 297 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 C2orf81A6NN90 581 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 TMCO5BA8MYB1 307 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 NBPF26B4DH59 902 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 VCAM1P19320 739 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 ECE1P42892 770 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 PDE6CP51160 858 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 TPD52P55327 224 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 SESN3P58005 492 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 IRX5P78411 483 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 TBX2Q13207 712 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 G3BP1Q13283 466 aaKnown RBP eCLIP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 SF3B3Q15393 1217 aaKnown RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 SAFBQ15424 915 aaKnown RBP eCLIP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 TWISTNBQ3B726 338 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 USPL1Q5W0Q7 1092 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 TRIM68Q6AZZ1 485 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 DPY19L2Q6NUT2 758 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 TMCO3Q6UWJ1 677 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 LDHAL6AQ6ZMR3 332 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 SYNE3Q6ZMZ3 975 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 SRLQ86TD4 932 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 MICALL2Q8IY33 904 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 CARNMT1Q8N4J0 409 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 CCDC24Q8N4L8 307 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 NBPF15Q8N660 670 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 NUDT16L1Q9BRJ7 211 aaKnown RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 RHOBTB2Q9BYZ6 727 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 ZBTB3Q9H5J0 574 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 COPRSQ9NQ92 184 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 PHTF1Q9UMS5 762 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 EFR3BQ9Y2G0 817 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 PAPPAQ13219 1627 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 F8W031 263 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 SLC27A2O14975 620 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 PMM2O15305 246 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 ZPR1O75312 459 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 RPS6KA4O75676 772 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 B3GALNT1O75752 331 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 CD4P01730 458 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 ZSCAN20P17040 1043 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 MPSTP25325 297 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 MAGEA8P43361 318 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 PTPN12Q05209 780 aaKnown RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 NR6A1Q15406 480 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 RABL6Q3YEC7 729 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 C2orf27AQ580R0 203 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 C10orf76Q5T2E6 689 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 WWC2Q6AWC2 1192 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 SLC44A2Q8IWA5 706 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms