RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 CYTH3O43739 400 aa15.47■□□□□ 0.07
RNF4-215ENST00000511843 SMPD1P17405 629 aa15.47■□□□□ 0.07
RNF4-215ENST00000511843 RXRAP19793 462 aa15.47■□□□□ 0.07
RNF4-215ENST00000511843 ACLYP53396 1101 aa15.47■□□□□ 0.07
RNF4-215ENST00000511843 TAPT1Q6NXT6 567 aa15.47■□□□□ 0.07
RNF4-215ENST00000511843 CASC1Q6TDU7 716 aa15.47■□□□□ 0.07
RNF4-215ENST00000511843 CATIPQ7Z7H3 387 aa15.47■□□□□ 0.07
RNF4-215ENST00000511843 KLHDC9Q8NEP7 349 aa15.47■□□□□ 0.07
RNF4-215ENST00000511843 PIGSQ96S52 555 aa15.47■□□□□ 0.07
RNF4-215ENST00000511843 COL20A1Q9P218 1284 aa15.47■□□□□ 0.07
RNF4-215ENST00000511843 PNMA2Q9UL42 364 aa15.47■□□□□ 0.07
RNF4-215ENST00000511843 SH2B2O14492 632 aaPredicted RBP15.46■□□□□ 0.07
RNF4-215ENST00000511843 OPLAHO14841 1288 aa15.46■□□□□ 0.07
RNF4-215ENST00000511843 CTAGE5O15320 804 aa15.46■□□□□ 0.07
RNF4-215ENST00000511843 MCM5P33992 734 aa15.46■□□□□ 0.07
RNF4-215ENST00000511843 MDM2Q00987 491 aaPredicted RBP15.46■□□□□ 0.07
RNF4-215ENST00000511843 CCSAPQ6IQ19 270 aaPredicted RBP15.46■□□□□ 0.07
RNF4-215ENST00000511843 TLK2Q86UE8 772 aa15.46■□□□□ 0.07
RNF4-215ENST00000511843 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
RNF4-215ENST00000511843 ZNF654Q8IZM8 581 aa15.46■□□□□ 0.07
RNF4-215ENST00000511843 MORC4Q8TE76 937 aa15.46■□□□□ 0.07
RNF4-215ENST00000511843 MTMR8Q96EF0 704 aa15.46■□□□□ 0.07
RNF4-215ENST00000511843 TCEANC2Q96MN5 208 aa15.46■□□□□ 0.07
RNF4-215ENST00000511843 TAAR1Q96RJ0 339 aa15.46■□□□□ 0.07
RNF4-215ENST00000511843 UPF3AQ9H1J1 476 aaKnown RBP15.46■□□□□ 0.07
RNF4-215ENST00000511843 ADD3Q9UEY8 706 aaKnown RBP15.46■□□□□ 0.07
RNF4-215ENST00000511843 ZBTB5O15062 677 aa15.45■□□□□ 0.06
RNF4-215ENST00000511843 GJA9P57773 515 aa15.45■□□□□ 0.06
RNF4-215ENST00000511843 PDE4DQ08499 809 aa15.45■□□□□ 0.06
RNF4-215ENST00000511843 SNX17Q15036 470 aa15.45■□□□□ 0.06
RNF4-215ENST00000511843 ADCK5Q3MIX3 580 aa15.45■□□□□ 0.06
RNF4-215ENST00000511843 GNASQ5JWF2 1037 aa15.45■□□□□ 0.06
RNF4-215ENST00000511843 NFXL1Q6ZNB6 911 aa15.45■□□□□ 0.06
RNF4-215ENST00000511843 SH3RF1Q7Z6J0 888 aa15.45■□□□□ 0.06
RNF4-215ENST00000511843 GDF15Q99988 308 aa15.45■□□□□ 0.06
RNF4-215ENST00000511843 AMNQ9BXJ7 453 aa15.45■□□□□ 0.06
RNF4-215ENST00000511843 VTA1Q9NP79 307 aa15.45■□□□□ 0.06
RNF4-215ENST00000511843 PRDM5Q9NQX1 630 aaPredicted RBP15.45■□□□□ 0.06
RNF4-215ENST00000511843 GNEQ9Y223 722 aaKnown RBP15.45■□□□□ 0.06
RNF4-215ENST00000511843 DOCK5Q9H7D0 1870 aa15.44■□□□□ 0.06
RNF4-215ENST00000511843 DYNC1LI2O43237 492 aaPredicted RBP15.44■□□□□ 0.06
RNF4-215ENST00000511843 CFBP00751 764 aa15.44■□□□□ 0.06
RNF4-215ENST00000511843 ASGR1P07306 291 aa15.44■□□□□ 0.06
RNF4-215ENST00000511843 CST5P28325 142 aaPredicted RBP15.44■□□□□ 0.06
RNF4-215ENST00000511843 FXR1P51114 621 aaKnown RBP eCLIP15.44■□□□□ 0.06
RNF4-215ENST00000511843 TLE2Q04725 743 aa15.44■□□□□ 0.06
RNF4-215ENST00000511843 CMTR1Q8N1G2 835 aaKnown RBP15.44■□□□□ 0.06
RNF4-215ENST00000511843 SYTL5Q8TDW5 730 aaPredicted RBP15.44■□□□□ 0.06
RNF4-215ENST00000511843 TMEM87BQ96K49 555 aa15.44■□□□□ 0.06
RNF4-215ENST00000511843 TSEN34Q9BSV6 310 aaKnown RBP15.44■□□□□ 0.06
RNF4-215ENST00000511843 RIOX1Q9H6W3 641 aa15.44■□□□□ 0.06
RNF4-215ENST00000511843 STARD7Q9NQZ5 370 aa15.44■□□□□ 0.06
RNF4-215ENST00000511843 MRPL11Q9Y3B7 192 aaKnown RBP15.44■□□□□ 0.06
RNF4-215ENST00000511843 PCDHA1Q9Y5I3 950 aa15.44■□□□□ 0.06
RNF4-215ENST00000511843 CCDC69A6NI79 296 aa15.43■□□□□ 0.06
RNF4-215ENST00000511843 PQBP1O60828 265 aaKnown RBP15.43■□□□□ 0.06
RNF4-215ENST00000511843 PLEKHA8P1O95397 391 aa15.43■□□□□ 0.06
RNF4-215ENST00000511843 CPA1P15085 419 aa15.43■□□□□ 0.06
RNF4-215ENST00000511843 EDNRBP24530 442 aa15.43■□□□□ 0.06
RNF4-215ENST00000511843 HOXA13P31271 388 aaPredicted RBP15.43■□□□□ 0.06
RNF4-215ENST00000511843 RNF20Q5VTR2 975 aa15.43■□□□□ 0.06
RNF4-215ENST00000511843 IQSEC1Q6DN90 963 aa15.43■□□□□ 0.06
RNF4-215ENST00000511843 RGS22Q8NE09 1264 aa15.43■□□□□ 0.06
RNF4-215ENST00000511843 CTCFLQ8NI51 663 aaPredicted RBP15.43■□□□□ 0.06
RNF4-215ENST00000511843 WDR11Q9BZH6 1224 aa15.43■□□□□ 0.06
RNF4-215ENST00000511843 SPC25Q9HBM1 224 aa15.43■□□□□ 0.06
RNF4-215ENST00000511843 PDLIM7Q9NR12 457 aa15.43■□□□□ 0.06
RNF4-215ENST00000511843 TRIM43BA6NCK2 446 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 MOXD2PA6NHM9 499 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 DDAH1O94760 285 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 SLC34A2O95436 690 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 EIF2AK2P19525 551 aaKnown RBP15.42■□□□□ 0.06
RNF4-215ENST00000511843 CXCL17Q6UXB2 119 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 MCF2L2Q86YR7 1114 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 DNERQ8NFT8 737 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 COPS5Q92905 334 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 VTI1AQ96AJ9 217 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 TRIM43Q96BQ3 446 aaPredicted RBP15.42■□□□□ 0.06
RNF4-215ENST00000511843 NEK1Q96PY6 1258 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 RMDN3Q96TC7 470 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 UBE2OQ9C0C9 1292 aaKnown RBP15.42■□□□□ 0.06
RNF4-215ENST00000511843 AP5M1Q9H0R1 490 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 PPP4R2Q9NY27 417 aa15.42■□□□□ 0.06
RNF4-215ENST00000511843 PNMA6FA0A0J9YX94 578 aa15.41■□□□□ 0.06
RNF4-215ENST00000511843 hCG_1642624A0A1W2PR95 340 aa15.41■□□□□ 0.06
RNF4-215ENST00000511843 HSD17B4P51659 736 aa15.41■□□□□ 0.06
RNF4-215ENST00000511843 FSCN1Q16658 493 aaKnown RBP15.41■□□□□ 0.06
RNF4-215ENST00000511843 DUSP28Q4G0W2 176 aa15.41■□□□□ 0.06
RNF4-215ENST00000511843 MICU3Q86XE3 530 aa15.41■□□□□ 0.06
RNF4-215ENST00000511843 SRBD1Q8N5C6 995 aaKnown RBP15.41■□□□□ 0.06
RNF4-215ENST00000511843 PCSK9Q8NBP7 692 aaKnown RBP15.41■□□□□ 0.06
RNF4-215ENST00000511843 ZFP91Q96JP5 570 aaPredicted RBP15.41■□□□□ 0.06
RNF4-215ENST00000511843 GLT1D1Q96MS3 346 aa15.41■□□□□ 0.06
RNF4-215ENST00000511843 MTA3Q9BTC8 594 aa15.41■□□□□ 0.06
RNF4-215ENST00000511843 PRKAG2Q9UGJ0 569 aa15.41■□□□□ 0.06
RNF4-215ENST00000511843 LOC102724159A0A0B4J2E5 919 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 RBM47A0AV96 593 aaKnown RBP15.4■□□□□ 0.06
RNF4-215ENST00000511843 SOX1O00570 391 aaPredicted RBP15.4■□□□□ 0.06
RNF4-215ENST00000511843 ARIH2O95376 493 aa15.4■□□□□ 0.06
RNF4-215ENST00000511843 KIF5BP33176 963 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms